EMBL-Align: a new public nucleotide and amino acid multiple sequence alignment database.

V Lombard; E B Camon; H E Parkinson; P Hingamp; G Stoesser; N Redaschi

doi:10.1093/bioinformatics/18.5.763

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EMBL-Align: a new public nucleotide and amino acid multiple sequence alignment database.

V Lombard·E B Camon·H E Parkinson·P Hingamp·G Stoesser·N Redaschi

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Abstract

UNLABELLED: The submission of multiple sequence alignment data to EMBL has grown 30-fold in the past 10 years, creating a problem of archiving them. The EBI has developed a new public database of multiple sequence alignments called EMBL-Align. It has a dedicated web-based submission tool, Webin-Align. Together they represent a comprehensive data management solution for alignment data. Webin-Align accepts all the common alignment formats and can display data in CLUSTALW format as well as a new standard EMBL-Align flat file format. The alignments are stored in the EMBL-Align database and can be queried from the EBI SRS (Sequence Retrieval System) server. AVAILABILITY: Webin-Align: http://www.ebi.ac.uk/embl/Submission/align_top.html, EMBL-Align: ftp://ftp.ebi.ac.uk/pub/databases/embl/align, http://srs.ebi.ac.uk/

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Amino Acid Sequence Base Sequence Database Management Systems Databases, Nucleic Acid Databases, Protein Genome Information Storage and Retrieval Internet Molecular Sequence Data National Library of Medicine (U.S.)Sequence Alignment United States Journal Article

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V Lombard, E B Camon, H E Parkinson, P Hingamp, G Stoesser, N Redaschi. 2002. EMBL-Align: a new public nucleotide and amino acid multiple sequence alignment database.. https://doi.org/10.1093/bioinformatics%2F18.5.763

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