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Trypanosomatidae codon usage and GC distribution.

G Alonso·P Guevara·J L Ramirez
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Abstract

A study of Trypanosomatidae GC distribution and codon usage is presented. The codon usage patterns in coincidence with the phylogenetical data are similar in Crithidia and Leishmania, whereas they are more divergent in Trypanosoma brucei and T. cruzi. The analysis of the GC mutational pressure in these organisms reveals that T. brucei, and to a lesser extent T. cruzi, have evolved towards a more balanced use of all bases, whereas Leishmania and Crithidia retain features of a primeval genetic apparatus. Tables with the approximated GC mutational pressure in homologous genes, and codon usage in Trypanosomatidae are presented.

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AnimalsBase CompositionBiological EvolutionCodonCrithidiaDNA, ProtozoanGenomeLeishmaniaMolecular Sequence DataSequence Homology, Nucleic AcidSpecies SpecificityTrypanosoma cruziTrypanosomatinaComparative StudyJournal ArticleResearch Support, Non-U.S. Gov't

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G Alonso, P Guevara, J L Ramirez. Trypanosomatidae codon usage and GC distribution.. https://doi.org/10.1590/s0074-02761992000400009

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