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Common interchange standards for proteomics data: Public availability of tools and schema.

Sandra Orchard·Henning Hermjakob·Randall K Julian·Kai Runte·David Sherman·Jérôme Wojcik·Weimin Zhu·Rolf Apweiler
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Abstract

The Proteomics Standards Initiative (PSI) aims to define community standards for data representation in proteomics and to facilitate data comparision, exchange and verification. To this end, a Level 1 Molecular Interaction XML data exchange format has been developed which has been accepted for publication and is freely available at the PSI website (http.//psidev.sf.net/). Several major protein interaction databases are already making data available in this format. A draft XML interchange format for mass spectrometry data has been written and is currently undergoing evaluation whilst work is ongoing to develop a proteomics data integration model, MIAPE.

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Sandra Orchard, Henning Hermjakob, Randall K Julian, Kai Runte, David Sherman, Jérôme Wojcik, Weimin Zhu, Rolf Apweiler. 2004. Common interchange standards for proteomics data: Public availability of tools and schema.. https://doi.org/10.1002/pmic.200300694

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