the JigCell model builder and run manager.

Marc Vass; Nicholas Allen; Clifford A Shaffer; Naren Ramakrishnan; Layne T Watson; John J Tyson

doi:10.1093/bioinformatics/bth422

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the JigCell model builder and run manager.

Marc Vass·Nicholas Allen·Clifford A Shaffer·Naren Ramakrishnan·Layne T Watson·John J Tyson

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Abstract

SUMMARY: We describe the JigCell Model Builder (JCMB), a tool for creating biochemical reaction network models. JCMB is designed for ease of use and its interface uses the standard spreadsheet metaphor. The JigCell Run Manager (JCRM) is a tool for organizing the large collections of simulation runs typically required by reaction network modeling activities. AVAILABILITY: JCMB and JCRM are part of the JigCell suite available at http://jigcell.biol.vt.edu.

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Animals Computer Simulation Database Management Systems Gene Expression Regulation Humans Information Storage and Retrieval Models, Biological Signal Transduction Software User-Computer Interface Journal Article Research Support, U.S. Gov't, Non-P.H.S.Research Support, U.S. Gov't, P.H.S.

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Marc Vass, Nicholas Allen, Clifford A Shaffer, Naren Ramakrishnan, Layne T Watson, John J Tyson. 2004-07-23. the JigCell model builder and run manager.. https://doi.org/10.1093/bioinformatics%2Fbth422

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