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PubMed · 15466909

TFExplorer: integrated analysis database for predicted transcription regulatory elements.

Jinsoo Kim·Jungmin Seo·Young Seek Lee·Sangsoo Kim
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Abstract

UNLABELLED: TFExplorer is a web-based integrated database for predicted regulatory elements in human, mouse and rat. It shows predicted binding sites of transcription factors in the promoter regions, along with their phylogenetic footprinting information. In addition, TFExplorer can search for genes that have a given sequence pattern in their promoter regions using the motif-searching method. AVAILABILITY: TFExplorer is freely available at http://mars.kribb.re.kr:8080/tfExplorer/ CONTACT: sskimb@kribb.re.kr.

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AlgorithmsDatabase Management SystemsDatabases, ProteinGene Expression RegulationGenes, RegulatorInformation Storage and RetrievalSequence AlignmentSequence Analysis, ProteinSystems IntegrationTranscription FactorsUser-Computer InterfaceJournal ArticleResearch Support, Non-U.S. Gov't

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Jinsoo Kim, Jungmin Seo, Young Seek Lee, Sangsoo Kim. 2004-10-05. TFExplorer: integrated analysis database for predicted transcription regulatory elements.. https://doi.org/10.1093/bioinformatics%2Fbti048

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