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RatMap--rat genome tools and data.

Greta Petersen·Per Johnson·Lars Andersson·Karin Klinga-Levan·Pedro M Gómez-Fabre·Fredrik Ståhl
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Abstract

The rat genome database RatMap (http://ratmap.org or http://ratmap.gen.gu.se) has been one of the main resources for rat genome information since 1994. The database is maintained by CMB-Genetics at Goteborg University in Sweden and provides information on rat genes, polymorphic rat DNA-markers and rat quantitative trait loci (QTLs), all curated at RatMap. The database is under the supervision of the Rat Gene and Nomenclature Committee (RGNC); thus much attention is paid to rat gene nomenclature. RatMap presents information on rat idiograms, karyotypes and provides a unified presentation of the rat genome sequence and integrated rat linkage maps. A set of tools is also available to facilitate the identification and characterization of rat QTLs, as well as the estimation of exon/intron number and sizes in individual rat genes. Furthermore, comparative gene maps of rat in regard to mouse and human are provided.

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AnimalsChromosome MappingChromosomes, Artificial, BacterialDatabase Management SystemsDatabases, Nucleic AcidGenomeGenomicsQuantitative Trait LociRatsTerminology as TopicJournal ArticleResearch Support, Non-U.S. Gov't

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Greta Petersen, Per Johnson, Lars Andersson, Karin Klinga-Levan, Pedro M Gómez-Fabre, Fredrik Ståhl. 2005-01-01. RatMap--rat genome tools and data.. https://doi.org/10.1093/nar%2Fgki125

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