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PubMed · 15672463

Sequence protein alignment with composition new evolutions (SPACne): a program for the identification of polypeptides using amino acid composition. A user friendly modification of SPAC.

S Gaillard·F Antonini·N Joly·J N Gouze·J P Grillasca
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Abstract

SPAC (sequence protein alignment with composition) is a software that retrieve from protein or nucleic acid databases, the sequences corresponding to a protein or peptide whose only amino acid composition and molecular weight are known. By accurately matching a DNA or a protein sequence to candidate protein or peptide fragment, this software may be used as a fast and cheap method for protein characterization. This paper describes a modification of the SPAC software, SPAC new evolutions (SPACne), which enables a more efficient and user friendly method of protein identification using amino acids composition. SPACne is available online at the web site: http://bioweb.pasteur.fr/seqanal/interfaces/spacne.html.

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AlgorithmsAmino AcidsAnimalsDatabases, FactualHumansInternetMolecular WeightPeptide FragmentsPeptidesProteinsSequence AlignmentSequence Analysis, ProteinSoftwareJournal Article

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S Gaillard, F Antonini, N Joly, J N Gouze, J P Grillasca. 2004. Sequence protein alignment with composition new evolutions (SPACne): a program for the identification of polypeptides using amino acid composition. A user friendly modification of SPAC.. https://pubmed.ncbi.nlm.nih.gov/15672463/

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