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PubMed · 15838119

Phi-LOG: a domain specific language for solving phylogenetic inference problems.

E Pontelli·D Ranjan·B Milligan·G Gupta
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Abstract

Domain experts think and reason at a high level of abstraction when they solve problems in their domain of expertise. We present the design and motivation behind a domain specific language called Phi-LOG to enable biologists (domain experts) to program solutions to phylogenetic inference problems at a very high level of abstraction. The implementation infrastructure (interpreter, compiler, debugger) for the DSL is automatically obtained through a software engineering framework based on Denotational Semantics and Logic Programming.

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Computer SimulationDatabase Management SystemsDatabases, GeneticEvolution, MolecularGene Expression ProfilingGene Expression RegulationModels, GeneticPhylogenyProgramming LanguagesSoftwareSoftware DesignUser-Computer InterfaceJournal ArticleResearch Support, U.S. Gov't, Non-P.H.S.Research Support, U.S. Gov't, P.H.S.

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E Pontelli, D Ranjan, B Milligan, G Gupta. 2002. Phi-LOG: a domain specific language for solving phylogenetic inference problems.. https://pubmed.ncbi.nlm.nih.gov/15838119/

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