SCRATCH: a protein structure and structural feature prediction server.

J Cheng; A Z Randall; M J Sweredoski; P Baldi

doi:10.1093/nar/gki396

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SCRATCH: a protein structure and structural feature prediction server.

J Cheng·A Z Randall·M J Sweredoski·P Baldi

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Abstract

SCRATCH is a server for predicting protein tertiary structure and structural features. The SCRATCH software suite includes predictors for secondary structure, relative solvent accessibility, disordered regions, domains, disulfide bridges, single mutation stability, residue contacts versus average, individual residue contacts and tertiary structure. The user simply provides an amino acid sequence and selects the desired predictions, then submits to the server. Results are emailed to the user. The server is available at http://www.igb.uci.edu/servers/psss.html.

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Disulfides Internet Mutation Protein Conformation Protein Structure, Secondary Protein Structure, Tertiary Proteins Software Solvents User-Computer Interface Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.Research Support, U.S. Gov't, P.H.S.

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J Cheng, A Z Randall, M J Sweredoski, P Baldi. 2005-07-01. SCRATCH: a protein structure and structural feature prediction server.. https://doi.org/10.1093/nar%2Fgki396

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