PubMed Health⌕ Search

PubMed · 1606182

Mass isotopomer pattern and precursor-product relationship.

Abstract

The synthesis of a homonucleus polymer from its labeled precursor will lead to the formation of molecules with different masses. The distribution of these mass isotopomers is strictly a function of the enrichment of the 13C-labeled precursor, and can thus be used for the determination of the precursor enrichment and product dilution in the de novo synthesis of the polymer. We present here a study of the isotopomer pattern of a polymer of acetate in the form of glucose pentaacetate synthesized from 13C-enriched acetic anhydride. The molecular ion contains four acetyl units. Its synthesis is analogous to that of octanoic acid from acetyl coenzyme A. The process of obtaining the mass isotopomer distribution in the tetraacetyl moiety from the ion cluster of m/z 331 of glucose pentaacetate is illustrated. After correcting for the contribution of 13C natural abundance, the plot of the ratio of mass isotopomers (m4/m2) against the observed enrichment of the tetraacetate moiety yielded a straight line with a slope of 1.45. The ratio was not altered by dilution with pre-existing unenriched product, as predicted. The slope of the observed linear relationship agreed with the general formula (N-(j-1))/j for the ratio of any two consecutive mass isotopomers (mj/mj-1). Theoretical and practical aspects of determining precursor enrichment from isotopomer pattern in polymers are discussed.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

W N Lee, E A Bergner, Z K Guo. 1992. Mass isotopomer pattern and precursor-product relationship.. https://doi.org/10.1002/bms.1200210210

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related citations

J-GFT NMR for precise measurement of mutually correlated nuclear spin-spin couplings.

G-matrix Fourier transform (GFT) NMR spectroscopy is presented for accurate and precise measurement of chemical shifts and nuclear spin-spin couplings correlated according to spin system. The new approach, named "J-GFT NMR", is based on a largely extended GFT NMR formalism and promises to have a broad impact on projection NMR spectroscopy. Specifically, constant-time J-GFT (6,2)D (HA-CA-CO)-N-HN was implemented for simultaneous measurement of five mutually correlated NMR parameters, that is, 15N backbone chemical shifts and the four one-bond spin-spin couplings 13Calpha-1Halpha, 13Calpha-13C', 15N-13C', and 15N-1HNu. The experiment was applied for measuring residual dipolar couplings (RDCs) in an 8 kDa protein Z-domain aligned with Pf1 phages. Comparison with RDC values extracted from conventional NMR experiments reveals that RDCs are measured with high precision and accuracy, which is attributable to the facts that (i) the use of constant time evolution ensures that signals do not broaden whenever multiple RDCs are jointly measured in a single dimension and (ii) RDCs are multiply encoded in the multiplets arising from the joint sampling. This corresponds to measuring the couplings multiple times in a statistically independent manner. A key feature of J-GFT NMR, i.e., the correlation of couplings according to spin systems without reference to sequential resonance assignments, promises to be particularly valuable for rapid identification of backbone conformation and classification of protein fold families on the basis of statistical analysis of dipolar couplings.

Carbon Isotopes↗

Water source partitioning among trees growing on shallow karst soils in a seasonally dry tropical climate.

The sources of water used by woody vegetation growing on karst soils in seasonally dry tropical regions are little known. In northern Yucatan (Mexico), trees withstand 4-6 months of annual drought in spite of the small water storage capacity of the shallow karst soil. We hypothesized that adult evergreen trees in Yucatan tap the aquifer for a reliable supply of water during the prolonged dry season. The naturally occurring concentration gradients in oxygen and hydrogen stable isotopes in soil, bedrock, groundwater and plant stem water were used to determine the sources of water used by native evergreen and drought-deciduous tree species. While the trees studied grew over a permanent water table (9-20 m depth), pit excavation showed that roots were largely restricted to the upper 2 m of the soil/bedrock profile. At the peak of the dry season, the delta(18)O signatures of potential water sources for the vegetation ranged from 4.1 +/- 1.1 per thousand in topsoil to -4.3 +/- 0.1 per thousand in groundwater. The delta(18)O values of tree stem water ranged from -2.8 +/- 0.3 per thousand in Talisia olivaeformis to 0.8 +/- 1 per thousand in Ficus cotinifolia, demonstrating vertical partitioning of soil/bedrock water among tree species. Stem water delta(18)O values were significantly different from that of groundwater for all the tree species investigated. Stem water samples plotted to the right of the meteoric water line, indicating utilization of water sources subject to evaporative isotopic enrichment. Foliar delta(13)C in adult trees varied widely among species, ranging from -25.3 +/- 0.3 per thousand in Enterolobium cyclocarpum to -28.7 +/- 0.4 per thousand in T. olivaeformis. Contrary to initial expectations, data indicate that native trees growing on shallow karst soils in northern Yucatan use little or no groundwater and depend mostly on water stored within the upper 2-3 m of the soil/bedrock profile. Water storage in subsurface soil-filled cavities and in the porous limestone bedrock is apparently sufficient to sustain adult evergreen trees throughout the pronounced dry season.

Carbon Isotopes↗