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PATIKAweb: a Web interface for analyzing biological pathways through advanced querying and visualization.

U Dogrusoz·E Z Erson·E Giral·E Demir·O Babur·A Cetintas·R Colak
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Abstract

Patikaweb provides a Web interface for retrieving and analyzing biological pathways in the Patika database, which contains data integrated from various prominent public pathway databases. It features a user-friendly interface, dynamic visualization and automated layout, advanced graph-theoretic queries for extracting biologically important phenomena, local persistence capability and exporting facilities to various pathway exchange formats.

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Computer GraphicsComputer SimulationDatabase Management SystemsDatabases, FactualGene Expression RegulationInformation Storage and RetrievalInternetModels, BiologicalOnline SystemsProtein Interaction MappingProteomeSignal TransductionSoftwareUser-Computer InterfaceJournal ArticleResearch Support, Non-U.S. Gov't

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U Dogrusoz, E Z Erson, E Giral, E Demir, O Babur, A Cetintas, R Colak. 2005-11-15. PATIKAweb: a Web interface for analyzing biological pathways through advanced querying and visualization.. https://doi.org/10.1093/bioinformatics%2Fbti776

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