EMAGE: a spatial database of gene expression patterns during mouse embryo development.

Jeffrey H Christiansen; Yiya Yang; Shanmugasundaram Venkataraman; Lorna Richardson; Peter Stevenson; Nicholas Burton; Richard A Baldock; Duncan R Davidson

doi:10.1093/nar/gkj006

PubMed · 16381949

EMAGE: a spatial database of gene expression patterns during mouse embryo development.

Jeffrey H Christiansen·Yiya Yang·Shanmugasundaram Venkataraman·Lorna Richardson·Peter Stevenson·Nicholas Burton·Richard A Baldock·Duncan R Davidson

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Abstract

EMAGE (http://genex.hgu.mrc.ac.uk/Emage/database) is a freely available, curated database of gene expression patterns generated by in situ techniques in the developing mouse embryo. It is unique in that it contains standardized spatial representations of the sites of gene expression for each gene, denoted against a set of virtual reference embryo models. As such, the data can be interrogated in a novel and abstract manner by using space to define a query. Accompanying the spatial representations of gene expression patterns are text descriptions of the sites of expression, which also allows searching of the data by more conventional text-based methods.

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Animals Databases, Genetic Embryo, Mammalian Embryonic Development Gene Expression Immunohistochemistry In Situ Hybridization Internet Mice Proteins RNA, Messenger User-Computer Interface Journal Article Research Support, Non-U.S. Gov't

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Jeffrey H Christiansen, Yiya Yang, Shanmugasundaram Venkataraman, Lorna Richardson, Peter Stevenson, Nicholas Burton, Richard A Baldock, Duncan R Davidson. 2006-01-01. EMAGE: a spatial database of gene expression patterns during mouse embryo development.. https://doi.org/10.1093/nar%2Fgkj006

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