PIANA: protein interactions and network analysis.

Ramon Aragues; Daniel Jaeggi; Baldo Oliva

doi:10.1093/bioinformatics/btl072

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PIANA: protein interactions and network analysis.

Ramon Aragues·Daniel Jaeggi·Baldo Oliva

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Abstract

UNLABELLED: We present a software framework and tool called Protein Interactions And Network Analysis (PIANA) that facilitates working with protein interaction networks by (1) integrating data from multiple sources, (2) providing a library that handles graph-related tasks and (3) automating the analysis of protein-protein interaction networks. PIANA can also be used as a stand-alone application to create protein interaction networks and perform tasks such as predicting protein interactions and helping to identify spots in a 2D electrophoresis gel. AVAILABILITY: PIANA is under the GNU GPL. Source code, database and detailed documentation may be freely downloaded from http://sbi.imim.es/piana.

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Computer Graphics Database Management Systems Databases, Protein Information Storage and Retrieval Proteins Signal Transduction Software User-Computer Interface Journal Article Research Support, Non-U.S. Gov't

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Ramon Aragues, Daniel Jaeggi, Baldo Oliva. 2006-03-01. PIANA: protein interactions and network analysis.. https://doi.org/10.1093/bioinformatics%2Fbtl072

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