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OSIRIS: a tool for retrieving literature about sequence variants.

Julio Bonis·Laura Inés Furlong·Ferran Sanz
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Abstract

UNLABELLED: Sequence variants, in particular single nucleotide polymorphisms (SNPs), are key elements for the identification of genes associated with complex diseases and with particular drug responses. The search for literature about sequence variation is hampered by the large number of allelic variants reported for many genes and by the variability in both gene and sequence variants nomenclatures. We describe OSIRIS, a search tool that integrates different sources of information with the aim to retrieve literature about sequence variation of a gene. In addition, it provides a method to link a dbSNP entry with the articles referring to it. AVAILABILITY: OSIRIS is available for public use at http://ibi.imim.es/

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Abstracting and IndexingBase SequenceDatabase Management SystemsGenetic VariationInformation Storage and RetrievalMolecular Sequence DataNatural Language ProcessingPeriodicals as TopicPolymorphism, Single NucleotidePubMedSequence Analysis, DNASoftwareVocabulary, ControlledJournal ArticleResearch Support, Non-U.S. Gov't

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Julio Bonis, Laura Inés Furlong, Ferran Sanz. 2006-07-31. OSIRIS: a tool for retrieving literature about sequence variants.. https://doi.org/10.1093/bioinformatics%2Fbtl421

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