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UniGene Tabulator: a full parser for the UniGene format.

Luca Lenzi·Flavia Frabetti·Federica Facchin·Raffaella Casadei·Lorenza Vitale·Silvia Canaider·Paolo Carinci·Maria Zannotti·Pierluigi Strippoli
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Abstract

UNLABELLED: UniGene Tabulator 1.0 provides a solution for full parsing of UniGene flat file format; it implements a structured graphical representation of each data field present in UniGene following import into a common database managing system usable in a personal computer. This database includes related tables for sequence, protein similarity, sequence-tagged site (STS) and transcript map interval (TXMAP) data, plus a summary table where each record represents a UniGene cluster. UniGene Tabulator enables full local management of UniGene data, allowing parsing, querying, indexing, retrieving, exporting and analysis of UniGene data in a relational database form, usable on Macintosh (OS X 10.3.9 or later) and Windows (2000, with service pack 4, XP, with service pack 2 or later) operating systems-based computers. AVAILABILITY: The current release, including both the FileMaker runtime applications, is freely available at http://apollo11.isto.unibo.it/software/

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Base SequenceDatabase Management SystemsDatabases, GeneticInformation Storage and RetrievalMolecular Sequence DataProteinsSoftwareUser-Computer InterfaceJournal ArticleResearch Support, Non-U.S. Gov't

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Luca Lenzi, Flavia Frabetti, Federica Facchin, Raffaella Casadei, Lorenza Vitale, Silvia Canaider, Paolo Carinci, Maria Zannotti, Pierluigi Strippoli. 2006-08-07. UniGene Tabulator: a full parser for the UniGene format.. https://doi.org/10.1093/bioinformatics%2Fbtl425

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