Assigning function to CDS through qualified query answering: beyond alignment and motifs.

T Gaasterland; N Maltsev; J Lobo; G H Chen

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PubMed · 7584382

Assigning function to CDS through qualified query answering: beyond alignment and motifs.

T Gaasterland·N Maltsev·J Lobo·G H Chen

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Abstract

In this paper, we show how to use qualitative query answering to annotate CDS-to-function relationships with confidence in the score, confidence in the tool, and confidence in the decision about the function. The system, implemented in Prolog, provides users with a powerful tool to analyze large quantities of data that have been produce by multiple sequence analysis programs. Using qualified query answering techniques, users can easily change the criteria for how tools reinforce each other and for how numbers of occurrences of particular functions reinforce each other. They can also alter how different scores for different tools are categorized.

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Animals DNA Database Management Systems Databases, Factual Humans Sequence Alignment Sequence Analysis Journal Article Research Support, U.S. Gov't, Non-P.H.S.

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T Gaasterland, N Maltsev, J Lobo, G H Chen. 1994. Assigning function to CDS through qualified query answering: beyond alignment and motifs.. https://pubmed.ncbi.nlm.nih.gov/7584382/

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