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GenXref. VI: Automatic generation of links between two heterogeneous databases.

F Achard·P Dessen
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Abstract

MOTIVATION: A large proportion of the information found in public databases is not sufficiently cross-referenced. We developed genXref, an automated system for link inference, because embarking on a manual cross-referencing of genome data would require too much expensive human expertise. It uses information retrieval technology to generate links between objects of heterogeneous databases. RESULTS: GenXref was used to generate links between GDB genes and Genbank human sequences. It resulted in > 10,000 links with a precision of 83% and a recall of approximately 32%.

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Abstracting and IndexingDatabases as TopicGeneticsHumansInformation Storage and RetrievalInformation SystemsJournal Article

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F Achard, P Dessen. 1998. GenXref. VI: Automatic generation of links between two heterogeneous databases.. https://doi.org/10.1093/bioinformatics%2F14.1.20

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