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Heterogeneity in spatial P-distribution and foraging capability by Zea mays: effects of patch size and barriers to restrict root proliferation within a patch.

BACKGROUND AND AIMS: Localized proliferation of roots in nutrient-enriched patches seems to be an adaptive response in many plants, but its function is still debatable. To understand the efficiency and limitation of foraging behaviour, the impact of patch size and the presence or absence of a barrier to root proliferation within phosphorus (P)-enriched patches was examined. METHODS: In pots filled with P-poor soil, six treatments of heterogeneous P supply were prepared: three patch sizes with or without a root barrier between patches. In addition, a homogeneous P supply treatment was also prepared. Irrespective of these treatments, each pot received the same total amount of P. Maize (Zea mays) was grown in each pot for 45 d in a greenhouse. KEY RESULTS: P content and biomass were greatest in plants grown in the largest patch due to successful root proliferation, and were higher in the presence of a root barrier. Interestingly, plants preferentially developed adventitious nodal roots projecting from the stem into the P-enriched soil, particularly in the largest patch with a root barrier. Removal of the barrier reduced the P-uptake capacity per unit root surface area or volume in P-enriched patches, revealing that the P-uptake capacity per root can be suppressed even in P-rich soil if other portions on the root axis encounter P-poor conditions. CONCLUSIONS: The results suggest that the efficiency of root morphological plasticity is largely determined by the size of the P-enriched patch. Furthermore, the results imply a novel aspect of P-uptake physiology that roots in heterogeneous P cannot demonstrate their potential capacity, as would be observed in roots encountering P continuously; this effect is probably mediated by an internal root factor.

Nitrogen↗

Influence of hydrological pulse on bacterial growth and DOC uptake in a clear-water Amazonian lake.

This study was conducted to evaluate: (1) the bacterial growth and the dissolved organic carbon (DOC) uptake in an Amazonian lake (Lake Batata) at high-water and low-water periods of the flood pulse; (2) the influence of nitrogen and phosphorus (NP) additions on bacterial growth and DOC uptake in Lake Batata at two flood pulse periods; and (3) the bioavailability of the main DOC sources in Lake Batata. Lake Batata is a typical clear-water Amazonian lake, located in the watershed of Trombetas River, Central Amazon, Brazil. Bacterial batch cultures were set up with 90% 0.2-microm filtered water and 10% inoculum from Lake Batata. N-NH(4)NO(3) and P-KH(2)PO(4), with final concentrations of 50 and 5 microM, respectively, were added to the cultures, except for controls. Extra sources of DOC (e.g., algal lysate, plant leachates) were added to constitute six distinct treatments. Bacterial response was measured by maximum bacterial abundance and rates of bacterial production, respiration, DOC uptake, and bacterial growth efficiency (BGE). Bacterial growth and DOC uptake were higher in NP treatments than in controls, indicating a consistent nutrient limitation in Lake Batata. The composition of DOC also seems to be an important regulating factor of bacterial growth in Lake Batata. Seasonally, bacterial growth and DOC bioavailability were higher at low-water period, when the phytoplankton is a significant extra source of DOC, than at high-water period, when the forest is the main source of DOC. DOC bioavailability was better estimated based on the diversity and the diagenetic stage of carbon compounds than on single classes of labile compounds. Changes in BGE were better related to CNP stoichiometry in the water, and the "excess" of organic substrates was oxidized in catabolism, despite the quality of these compounds for bacterial growth. Finally, we conclude that bacterial growth and DOC uptake vary throughout the flood pulse in clear-water Amazonian ecosystems as a result of changes in nutrient concentration and in DOC composition.

Bacteria↗

Natural water-purification system observed in a shallow coastal lagoon: Matsukawa-ura, Japan.

Field surveys and in situ experiments were conducted in the shallow Matsukawa-ura in summer to evaluate the biological efficiencies of shallow-water areas for preserving coastal ecosystems. In Matsukawa-ura (5.8 km(2)), the suspension-feeding bivalves Ruditapes philippinarum and Crassostrea gigas were the dominant animals--their total biomasses (wet weight) were estimated to be 3.4 x 10(6) and 2.3 x 10(6) kg, respectively. Ulva sp. and Zostera marina were the dominant macrophyte species during the summer, with standing crops estimated to be 0.29 x 10(6) and 0.20 x 10(6) kg, respectively. The dissolved inorganic nitrogen (DIN) uptake rates for Ulva sp. and Z. marina were determined by in situ experiments. An ecological model calculated on the basis of the observed dataset showed that, in comparison with tidal exchange, a significant amount of particulate organic matter was removed by bivalve filtration and a considerable quantity of DIN was removed by macrophyte species.

Animals↗

Nitrogen storage and remobilization in Brassica napus L. during the growth cycle: nitrogen fluxes within the plant and changes in soluble protein patterns.

Oilseed rape (Brassica napus L.) is commonly grown for oil or bio-fuel production, while the seed residues can be used for animal feed. It can also be grown as a catch crop because of its efficiency in extracting mineral N from the soil profile. However, the N harvest index is usually low, due in part to a low ability to remobilize N from leaves and to the fall of N-rich leaves which allows a significant amount of N to return to the environment. In order to understand how N filling of pods occurs, experiments were undertaken to quantify N flows within the plant by (15)N labelling and to follow the changes in soluble protein profiles of tissues presumed to store and subsequently to remobilize N. Whereas N uptake increased as a function of growth, N uptake capacity decreased at flowering to a non-significant level during pod filling. However, large amounts of endogenous N were transferred from the leaves to the stems and to taproots which acted as a buffering storage compartment later used to supply the reproductive tissue. About 15% of the total N cycling through the plant were lost through leaf fall and 48%, nearly all of which had been remobilized from vegetative tissues, were finally recovered in the mature pods. SDS-PAGE analysis revealed that large amounts of a 23 kDa polypeptide accumulated in the taproots during flowering and was later fully hydrolysed. Its putative function of storage protein is further supported by the fact that when plants were grown at lower temperature, both flowering, its accumulation and further mobilization were delayed. The overall results are discussed in relation to plant strategies which optimize N cycling to reproductive sinks by means of buffering vegetative tissues such as stems and taproots.

Biological Transport↗

Substrate and pH effects on glutamine synthesis in rat liver. Consequences for acid-base regulation.

Switching in acidosis of hepatic nitrogen disposal from urea synthesis to NH4+ and net glutamine production was demonstrated in the isolated perfused livers of starved male Wistar rats. Lactate was preferred to glucose as the substrate for the carbon skeleton of glutamine synthesized over the pH range 6.9-7.5. This is necessary if the switch away from a proton-producing process (ureagenesis) in acidosis is to constitute an acid-base regulating system intrinsic to the liver. Glutamine balance shifted with pH from marked net uptake to small net output under acidotic conditions (pH 7.5-6.9), an effect due solely to a decrease in glutamine uptake. NH4+ uptake by the liver had a linear relationship with pH, being markedly decreased in acidosis because glutamine synthesis was insufficient to compensate for the decreased incorporation into urea. Animals rendered chronically acidotic showed a lower central venous plasma urea concentration and a raised NH4+ concentration, but their livers synthesized no more glutamine when perfused at an acidotic pH than did normal livers. We conclude that perivenous hepatocytes may not be efficient scavengers of NH4+ ions, which must be partly disposed of elsewhere by non-proton-generating pathways if inhibition of ureagenesis is to represent a hepatic acid-base regulating system.

Acid-Base Equilibrium↗

Quantitative and qualitative scintigraphic measurement of renal function in dogs exposed to toxic doses of Gentamicin.

Five, 3-month-old mongrel dogs weighing between 4.5 to 5.5 kg were studied to evaluate and compare the efficiency of 99mTc-DTPA, 99mTc-MAG3, and 99mTc-DMSA in detecting gentamicin-induced renal tubular injury. After baseline renograms using all three methods, all dogs received daily intramuscular injections of gentamicin at a dose of 30-45 mg/kg. Additional studies were obtained after a cumulative dose of 450, 1,575, and 2,250 mg of gentamicin was reached. Glomerular filtration rate (GFR), effective renal plasma flow (ERPF), and percentage of total renal uptake measurements were calculated. Baseline and post-gentamicin injection blood urea nitrogen (BUN) and serum creatinine values were determined. A Duncan test revealed significant renal function impairment at 450 mgs of cumulated gentamicin with 99mTc-DMSA and at 1,575 mgs of cumulated gentamicin for 99mTc-DTPA and 99mTc-MAG3. There was no correlation between BUN and serum creatinine values when compared to gentamicin (p > 0.05). The images obtained with 99mTc-MAG3 were of better quality than those obtained with 99mTc-DTPA even under severe renal dysfunction. Percentage of 99mTc-DMSA uptake indicated renal damage, before than GFR and ERPF. BUN and serum creatinine measurements were poor indicators of gentamicin-induced renal failure.

Animals↗

Impact of fly ash and phosphate solubilising bacteria on soybean productivity.

Fly ash was characterized for the leaching potential of some major and minor constituents and then added to soil at 20, 40, 60 and 80 t/ha with N and P fertilizer to evaluate its effect on nutrient uptake and soybean yield singly as well as in combination with an efficient phosphate solubilizer Pseudomonas striata. The application of fly ash at 40 t/ha in conjunction with P. striata inoculation improved the bean yield and P uptake by grain. The available phosphorus of soil also showed an upward trend. The fly ash did not exert any detrimental effect on the population of inoculated bacteria. However, the uptake of trace elements did not improve significantly.

Biological Availability↗

Effects of inoculation of plant growth-promoting rhizobacteria on metal uptake by Brassica juncea.

A greenhouse study was carried out with Brassica juncea to critically evaluate effects of bacterial inoculation on the uptake of heavy metals from Pb-Zn mine tailings by plants. Application of plant growth-promoting rhizobacteria, including nitrogen-fixing bacteria and phosphate and potassium solubilizers, might play an important role in the further development of phytoremediation techniques. The presence of these beneficial bacteria stimulated plant growth and protected the plant from metal toxicity. Inoculation with rhizobacteria had little influence on the metal concentrations in plant tissues, but produced a much larger above-ground biomass and altered metal bioavailability in the soil. As a consequence, higher efficiency of phytoextraction was obtained compared with control treatments.

Biodegradation, Environmental↗

Post-transcriptional control and kinetic characterization of proline transport in germinating conidiospores of Aspergillus nidulans.

In the filamentous fungus Aspergillus nidulans, L-proline uptake is mediated by the product of the prnB gene which codes for a member of a family of amino acid transporters found both in pro- and eukaryotes. Regulation of prnB gene expression has previously been studied in great detail at the molecular level. However, no studies have addressed possible post-transcriptional controls or the kinetic characterisation of the PrnB transporter. Here we develop a rapid and efficient method for direct uptake measurements of proline in germinating conidiospores of A. nidulans. We make use of this method and Northern blot analyses in parallel to study the regulation of PrnB expression both at the level of prnB message accumulation and at a post-transcriptional level. These studies show that (i) pathway-specific and wide-domain regulatory systems, previously shown to control prnB gene expression in multicellular mycelia, also operate in unicellular conidia committed to germination; and (ii) PrnB activity is regulated in response to the nitrogen source present in the medium and the level of internally accumulated proline or other amino acids. We also characterise kinetically the PrnB transporter and a secondary proline transport system. Our results open new possibilities for studies using unicellular conidiospores of filamentous fungi and constitute a necessary first step for a subsequent structure-function analysis of the PrnB transporter.

Amino Acids↗

Wild barley: a source of genes for crop improvement in the 21st century?

The development of new barleys tolerant of abiotic and biotic stresses is an essential part of the continued improvement of the crop. The domestication of barley, as in many crops, resulted in a marked truncation of the genetical variation present in wild populations. This process is significant to agronomists and scientists because a lack of allelic variation will prevent the development of adapted cultivars and hinder the investigation of the genetic mechanisms underlying performance. Wild barley would be a useful source of new genetic variation for abiotic stress tolerance if surveys identify appropriate genetic variation and the development of marker-assisted selection allows efficient manipulation in cultivar development. There are many wild barley collections from all areas of its natural distribution, but the largest are derived from the Mediterranean region. The results of a range of assays designed to explore abiotic stress tolerance in barley are reported in this paper. The assays included; sodium chloride uptake in wild barley and a mapping population, effects for delta 13C and plant dry weight in wheat aneuploids, effects of photoperiod and vernalization in wild barley, and measurements of root length in wild barley given drought and nitrogen starvation treatments in hydroponic culture. There are examples of the use of wild barley in breeding programmes, for example, as a source of new disease resistance genes, but the further exploration of the differences between wild barley and cultivars is hampered by the lack of good genetic maps. In parallel to the need for genetic studies there is also a need for the development of good physiological models of crop responses to the environment. Given these tools, wild barley offers the prospect of a 'goldmine' of untapped genetic reserves.

Chlorides↗

Nutrient addition to enhance biological treatment of greywater.

This study compares the chemical oxygen demand (COD) removal and respiration rates of a microbial population treating real and synthetic greywaters dosed with nutrient supplements. The nutrient composition of the real and synthetic greywaters was analysed and the dosing regime for nitrogen, phosphorus and a range of trace metals planned accordingly. The doses consisted of eight single additives (macronutrients and trace metals) to the control greywater and six trace metal additions to C: N : P balanced greywater. The COD removal for the control real and synthetic greywater in lab-scale activated sludge systems (0.038 and 0.286 kg COD kg MLSS(-1) d(-1), respectively) confirmed nutrient limitation and the poor degree of greywater treatment. Nutrient dosing increased the COD removal rate and oxygen uptake rate in many cases. The greatest stimulation of microbial activity was observed with zinc additions to C: N: P balanced real greywater (1.291 kg COD kg MLSS(-1) d(-1) over 30 times the control). Inhibitory effects to various extents were rare and limited mainly to the additions of metals to synthetic greywater. The dominance of chemicals effects was observed on addition of some micronutrients; notably iron and aluminium, metals on which many coagulants for use in biotreatment of other wastewaters are based. The data indicate that the impact of understanding microbial processes and the nutrients required for wastewater treatment can only serve to optimise process efficiency for the proposed treatment of greywater.

Carbon↗

Improved stability of rabbit and rat intestinal brush border membrane vesicles using phospholipase inhibitors.

The initial rates of Na(+)-dependent D-aspartate and D-glucose uptakes were shown to decline from the time of resuspension of brush border membrane vesicles isolated from rabbit and rat jejunum by standard divalent cation precipitation procedures. The former were however more stable than the latter and followed quite closely the decrease in the intravesicular volume, thus suggesting that the loss of transport activity may involve both nonspecific opening of the vesicles and either direct or indirect specific inactivation of the transporters. Uptake rates for both substrates did tend to stabilize at 6-24 h from resuspension, however this final 'next day' uptake activity was too low to be of practical use in kinetic studies. Freezing aliquots of rabbit jejunal vesicles in liquid N2 until the time of assay resulted in complete stabilization of D-glucose uptake. A modified homogenate buffer designed to inhibit a broad spectrum of phospholipase activities resulted in a partial stabilization of glucose transport by rabbit jejunal vesicles with, on average, an over 6-fold enrichment in the 'next day' stable specific activity of uptake as compared to unfrozen vesicles. The modified homogenate buffer also improved the stability and the 'next day' specific activities of D-glucose uptake in rat jejunal brush border vesicles and D-aspartic acid uptake in rabbit jejunal vesicles. It also completely stabilized the intravesicular volume in the latter preparation. An evaluation of the kinetic parameters of Na(+)-dependent D-glucose transport in rabbit vesicles prepared from either the standard homogenate media and frozen in liquid N2 or the modified media and allowed to stabilize overnight, revealed a single transport system with a Km of 0.31-0.32 mM as the best model to fit the data. As such the modifications to the homogenate media do not appear to effect the functional properties of D-glucose transport in the membrane. While being less efficient in stabilizing the vesicles than the rapid freezing protocol, it is shown that the modified homogenate should however be preferred when dealing with slowly permeant ions like choline since it provides in this case the only alternative to reliable measurement of uptake rates across a stable and equilibrated vesicle preparation.

Animals↗

Uptake and turnover of L-(13N)-glutamate in the normal human heart and in patients with coronary artery disease.

L-(13N)-glutamate (4-8 mCi) was administered IV to 27 patients with coronary artery disease and to 12 control subjects. Quantitative whole body imaging of the 13N label was performed in 31 individuals at different time intervals following the injection. Initial uptake of the total myocardium was estimated to be 5.0 +/- 0.88% of the dose. Standardized areas of reduced size on the projection plane contained 2.38 +2- 0.41% of the total dose in control subjects and 2.67 +/- 0.49% in coronary patients. Subsequent imaging exhibited significant differences in the dynamic behavior of both groups: 13N activity loss within 10 min was 3.2 +/- 4.2% of the initial value in control subjects and 16.0 +/- 9.8% in coronary patients. In individual cases a high myocardial accumulation of the 13N label was observed in regions of reduced 201Tl uptake. The findings are explained by an augmented extraction efficiency in cases of flow reduction. Glutamate utilization may be involved in metabolic adaptations of the myocardium to chronic or repetitive ischemia and may be worthy of further investigation by positron emission tomography.

Adolescent↗

Comparative evaluation of yeast and bacterial treatment of high salinity wastewater based on biokinetic coefficients.

This paper compares the performance of the aerobic treatment of high organic-high salinity wastewater by yeast and bacterial systems. The biokinetic coefficients for both the systems were determined and used to analyze the behavior of the yeast and bacterial systems under high salinity conditions. It was found that the yeast culture was more efficient compared to the bacterial culture, especially for high salinity conditions that severely inhibit growth and performance of bacterial systems. The values of the biokinetic coefficients obtained from this study are in agreement with the observations. Nutrient removal capacity has also been found to be better for yeast due to higher nutrient uptake in the yeast biomass.

Bacteria, Aerobic↗

Environmental impact of irrigation in La Violada District (Spain): II. Nitrogen fertilization and nitrate export patterns in drainage water.

Fertilizer leaching affects farm profitability and contributes to nonpoint-source pollution of receiving waters. This work aimed to establish nitrate nitrogen export from La Violada Gully in relation to nitrogen fertilization practices in its basin (La Violada Gully watershed, VGW, 19,637 ha) and especially in La Violada Irrigation District (VID, 5282 ha). Nitrogen (N) fertilization in VID (and VGW) was determined through interviews with local farmers for the hydrologic years 1995 and 1996 and NO3-N load in the gully was monitored from 1995 to 1998. The N fertilizer applied in VGW was 2175 Mg in 1995 and 2795 Mg in 1996. About 43% was applied in VID (945 Mg in 1995 and 1161 Mg in 1996). The most fertilized crop was corn: 398 kg N ha-1 (665 Mg) in 1995 and 453 kg N ha-1 (911 Mg) in 1996. Nitrogen fertilization was higher than N uptake for irrigated crops, especially for corn and rice. Nitrate N load in La Violada Gully averaged 427.4 Mg yr-1. Seventy-five percent of the exports took place during the irrigation season (321.8 Mg). During the non-irrigation season maximum NO3-N loads (3.1 Mg NO3-N d-1) were found after heavy rains following the N side-dressing of wheat in the rain-fed area of VGW (February). During the irrigation season NO3-N load was determined by outflow from the district (caused by irrigation) and to a lesser extent by changes in NO3 concentration (caused by fertilization), showing peaks in April (pre-sowing corn N fertilization and first irrigations) and June to August (highest irrigation months and corn side-dress N applications, maximum 6.3 Mg NO3-N d-1 in July). Adjusting N fertilization to crops' needs, improving irrigation efficiencies, and better scheduling N fertilization and irrigation in corn could reduce N export from VID.

Environment↗

Denitrifying phosphorus removal by anaerobic/anoxic sequencing batch reactor.

Denitrifying phosphorus removal was verified in a laboratory anaerobic/anoxic Sequencing Batch Reactor (A/A SBR) for a period of 18 months. The results obtained demonstrated the ability of the anaerobic/anoxic strategy to enrich the growth of denitrifying phosphorus bacteria (DPB) capable of taking up phosphate under anoxic conditions by using nitrate as the electron acceptor. Phosphorus removal efficiency ranging from 40-100% could be attained in an A/A SBR system. Simultaneous anoxic phosphate uptake and biological denitrification under anaerobic/anoxic condition occurred in this system. Batch tests showed, however, that simultaneous presence of carbon and nitrate would be detrimental to denitrifying phosphorus removal. Results of bacteria studies suggested that three denitrifying isolates had aerobic phosphorus removing ability.

Anaerobiosis↗

The role of oxygen limitation in the formation of poly- -hydroxybutyrate during batch and continuous culture of Azotobacter beijerinckii.

Azotobacter beijerinckii was grown in ammonia-free glucose-mineral salts media in batch culture and in chemostat cultures limited by the supply of glucose, oxygen or molecular nitrogen. In batch culture poly-beta-hydroxybutyrate was formed towards the end of exponential growth and accumulated to about 74% of the cell dry weight. In chemostat cultures little poly-beta-hydroxybutyrate accumulated in organisms that were nitrogen-limited, but when oxygen limited a much increased yield of cells per mol of glucose was observed, and the organisms contained up to 50% of their dry weight of poly-beta-hydroxybutyrate. In carbon-limited cultures (D, the dilution rate,=0.035-0.240h(-1)), the growth yield ranged from 13.1 to 19.8g/mol of glucose and the poly-beta-hydroxybutyrate content did not exceed 3.0% of the dry weight. In oxygen-limited cultures (D=0.049-0.252h(-1)) the growth yield ranged from 48.4 to 70.1g/mol of glucose and the poly-beta-hydroxybutyrate content was between 19.6 and 44.6% of dry weight. In nitrogen-limited cultures (D=0.053-0.255h(-1)) the growth yield ranged from 7.45 to 19.9g/mol of glucose and the poly-beta-hydroxybutyrate content was less than 1.5% of dry weight. The sudden imposition of oxygen limitation on a nitrogen-limited chemostat culture produced a rapid increase in poly-beta-hydroxybutyrate content and cell yield. Determinations on chemostat cultures revealed that during oxygen-limited steady states (D=0.1h(-1)) the oxygen uptake decreased to 100mul h(-1) per mg dry wt. compared with 675 for a glucose-limited culture (D=0.1h(-1)). Nitrogen-limited cultures had CO(2) production values in situ ranging from 660 to 1055mul h(-1) per mg dry wt. at growth rates of 0.053-0.234h(-1) and carbon-limited cultures exhibited a variation of CO(2) production between 185 and 1328mul h(-1) per mg dry wt. at growth rates between 0.035 and 0.240h(-1). These findings are discussed in relation to poly-beta-hydroxybutyrate formation, growth efficiency and growth yield during growth on glucose. We suggest that poly-beta-hydroxybutyrate is produced in response to oxygen limitation and represents not only a store of carbon and energy but also an electron sink into which excess of reducing power can be channelled.

Anaerobiosis↗

Dynamic and steady-state responses of inorganic nitrogen pools and NH(3) exchange in leaves of Lolium perenne and Bromus erectus to changes in root nitrogen supply.

Short- and long-term responses of inorganic N pools and plant-atmosphere NH(3) exchange to changes in external N supply were investigated in 11-week-old plants of two grass species, Lolium perenne and Bromus erectus, characteristic of N-rich and N-poor grassland ecosystems, respectively. A switch of root N source from NO(-)(3)to NH(4)(+) caused within 3 h a 3- to 6-fold increase in leaf apoplastic NH(4)(+) concentration and a simultaneous decrease in apoplastic pH of about 0.4 pH units in both species. The concentration of total extractable leaf tissue NH(4)(+) also increased two to three times within 3 h after the switch. Removal of exogenous NH(4)(+) caused the apoplastic NH(4)(+) concentration to decline back to the original level within 24 h, whereas the leaf tissue NH(4)(+)concentration decreased more slowly and did not reach the original level in 48 h. After growing for 5 weeks with a steady-state supply of NO(-)(3)or NH(4)(+), L. perenne were in all cases larger, contained more N, and utilized the absorbed N more efficiently for growth than B. erectus, whereas the two species behaved oppositely with respect to tissue concentrations of NO(-)(3), NH(4)(+), and total N. Ammonia compensation points were higher for B. erectus than for L. perenne and were in both species higher for NH(4)(+)- than for NO(-)(3)-grown plants. Steady-state levels of apoplastic NH(4)(+), tissue NH(4)(+), and NH(3) emission were significantly correlated. It is concluded that leaf apoplastic NH(4)(+) is a highly dynamic pool, closely reflecting changes in the external N supply. This rapid response may constitute a signaling system coordinating leaf N metabolism with the actual N uptake by the roots and the external N availability.

Ammonia↗