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PubMed2006

A spatially structured network of inhibitory and excitatory connections directs impulse traffic within the lateral amygdala.

The lateral nucleus of the amygdala is the entry point of most sensory inputs into the amygdala. However, the way information is processed and distributed within the lateral nucleus still eludes us. To gain some insight into this issue, we have examined the spatial organization of excitatory and inhibitory connections in the lateral nucleus. To this end, we performed whole-cell recordings of principal lateral amygdala neurons and studied their responses to local pressure applications of glutamate in coronal and horizontal slices of the guinea-pig amygdala. In coronal sections, glutamate puffs performed at a distance from the recorded cells usually evoked inhibitory responses, except when the recorded neuron was adjacent to the external capsule, in which case excitatory responses could be evoked from ejection sites along the external capsule. In contrast, glutamate puffs evoked a mixture of excitatory and inhibitory responses in horizontal slices. Excitatory responses were generally evoked from stimulation sites located lateral to the recorded cell whereas inhibitory responses were commonly elicited from medial stimulation sites, irrespective of their rostrocaudal position. These findings confirm and extend previous tract-tracing studies where it was found that intrinsic connections within the lateral amygdala prevalently run in the dorsoventral and lateromedial directions. However, our results also reveal a hitherto unsuspected level of spatial heterogeneity in the intrinsic circuit of the lateral amygdala. The prevalence of excitatory responses in horizontal slices coupled to the ubiquity of inhibitory responses in coronal slices suggest that the lateral amygdala network is designed to allow associative interactions within the rostrocaudal plane while preventing runaway excitation locally.

Amygdala↗
PubMed2004

Spatially structured population dynamics in feral oilseed rape.

We studied the population dynamics of feral oilseed rape (Brassica napus) for 10 years (1993-2002) in 3658 adjacent permanent 100 m quadrats in the verges of the M25 motorway around London, UK. The aim was to determine the relative importance of different factors affecting the observed temporal patterns of population dynamics and their spatial correlations. A wide range of population dynamics was observed (downward or upward trends, cycles, local extinctions and recolonizations), but overall the populations were not self-replacing (lambda < 1). Many quadrats remained unoccupied throughout the study period, but a few were occupied at high densities for all 10 years. Most quadrats showed transient oilseed rape populations, lasting 1-4 years. There were strong spatial patterns in mean population density, associated with soil conditions and the successional age of the plant community dominating the verge, and these large-scale spatial patterns were highly consistent from year to year. The importance of seed spilled from trucks in transit to the processing plant at Erith in Kent was confirmed: rape populations were significantly higher on the 'to Erith' verge than the 'from Erith' verge (overall mean 2.83-fold greater stem density). Quadrats in which lambda > 1 were much more frequent in the 'to Erith' verge, indicating that seed immigration can give the spurious impression of self-replacing population dynamics in time-series analysis. There was little evidence of a pervasive Moran effect, and climatic forcing did not produce widespread large-scale synchrony in population dynamics for the motorway as a whole; just 23% of quadrats had significant rank correlations with the mean time-series. There was, however, significant local spatial synchrony of population dynamics, apparently associated with soil disturbance and seed input. This study draws attention to the possibility that different processes may impose population synchrony at different scales. We hypothesize that synchrony in this system is driven by at least three processes: small-scale, local forcing caused by soil disturbance, intermediate-scale forcing as a result of seed input, and large-scale climatic forcing (e.g. winter rainfall) that affects the motorway as a whole.

Brassica napus↗
PubMed1983

The effects of temporal modulation on the perceived spatial structure of sine-wave gratings.

Evidence is presented that two distinct effects are generated when a sine-wave grating is temporally modulated. These effects may differentiated on the grounds of different responses with different forms of temporal modulation (drift or phase reversal), different behaviour with changes of visual eccentricity and with changes of contrast. One effect is roughly equivalent to spatial-frequency doubling, as described by Kelly. The other is seen as a fractional increase in apparent spatial frequency ie 1.2 X 1.4 X the original. Earlier papers are reviewed to lend support to these conclusions. The results obtained for spatial-frequency doubling are consistent with Kelly's model of a nonlinearity followed by a temporal integration. Spatial-frequency doubling emerges under conditions where a fractional increase in apparent spatial frequency would generally be expected but the particular spatiotemporal conditions are such that a breakdown in the motion-correspondence process may be suspected. Reasons for the existence of fractional shifts are not entirely clear, but it is argued that the similarity of the shifts induced by various manipulations (decreases of luminance, decreases of contrast, temporal modulation) are such that a general explanation must be sought, rather than one specific to temporal modulation alone.

Adult↗
PubMed2005

Spatial structure of Mn-Mn acceptor pairs in GaAs.

The local density of states of Mn-Mn pairs in GaAs is mapped with cross-sectional scanning tunneling microscopy and compared with theoretical calculations based on envelope-function and tight-binding models. These measurements and calculations show that the crosslike shape of the Mn-acceptor wave function in GaAs persists even at very short Mn-Mn spatial separations. The resilience of the Mn-acceptor wave function to high doping levels suggests that ferromagnetism in GaMnAs is strongly influenced by impurity-band formation. The envelope-function and tight-binding models predict similarly anisotropic overlaps of the Mn wave functions for Mn-Mn pairs. This anisotropy implies differing Curie temperatures for Mn delta-doped layers grown on differently oriented substrates.

Journal Article↗
PubMed1992

Apparent duration and spatial structure.

In three experiments, we investigated the relative perceived duration of a full bandwidth image and a set of high- and lowpass filtered images of a scene, briefly presented on a visual display unit. In Experiment 1, the various images were compared with each other, using a paired comparison method. All images were presented for 40 msec, and observers were asked to judge which of each pair of images had the longest duration. The results showed that images containing a wide spatial frequency bandwidth were judged to be of longer duration than were images of a narrower bandwidth, regardless of whether the latter were high- or lowpass filtered. In Experiment 2, a 40-msec presentation of each of the images was compared with a presentation of a probe that was 20, 40, 60, or 80 msec in duration. Observers again judged which of each pair of images had the longest duration. The results were very similar to those of Experiment 1, with wide bandwidth images being judged to be of longer duration than were narrow bandwidth images. In Experiment 3, instead of comparing the various filtered versions of the image with each other, we attempted to obtain a direct measure of perceived duration by comparing a flashing LED to a 40-msec flash of a subset of the images used in the previous experiments. The observers' task was to adjust the duration of the LED flash to match the perceived duration of each image.(ABSTRACT TRUNCATED AT 250 WORDS)

Adult↗
PubMed1987

Spatial structure of rabbit liver metallothionein-2 in solution by NMR.

Sequence-specific assignments of the proton spin systems of (Cd7) rabbit liver metallothionein-2 were obtained with homonuclear two-dimensional nuclear magnetic resonance techniques. On the basis of the NMR data the amino acid sequence had to be modified in six positions, and it was found that the protein consists of 62 rather than 61 residues. Through-bond connectivities between the metals and sequentially assigned cysteine residues were obtained with two-dimensional heteronuclear 1H-113Cd correlated spectroscopy. This information, and distance constraints obtained from nuclear Overhauser enhancement spectra were used as input for distance geometry calculations of the spatial polypeptide fold. The polypeptide chain forms two domains which enclose a three-metal cluster and a four-metal cluster, respectively. The metal coordination within the clusters is markedly different from that of (Cd5, Zn2)-MT-2 from rat liver as determined by X-ray crystallography (Furey, et al., 1986) i.e. in the two structures different metal-cysteine combinations prevail for 5 of the 12 connectivities in the three-metal cluster and for 14 of the 16 connectivities in the four-metal cluster.

Amino Acid Sequence↗
PubMed2000

Spatial structure, contrast polarity and motion integration.

It has been shown that in the initial stages of motion processing, the ON and OFF pathways stay more or less separated. There is evidence that this distinction between motion signals from opposite contrast polarities remains at least partly intact in the integration stage of local motion information. At the same time, interactions between the two systems are also apparent. Here we constructed stimuli that contained a constant number of moving checks. The checks were either assigned only one contrast polarity, or contrast polarity was distributed across the checks either randomly or evenly. We investigated how the spatial configuration of the moving stimulus affected direction discrimination thresholds for the different polarity distributions. Our results provide new evidence for contrast-sign-specific integration of local motion signals within areas of limited size, and inhibitory interactions between these separate ON and OFF motion sensor pools.

Contrast Sensitivity↗
PubMed1987

Mentally retarded and nonretarded adults' sensitivity to spatial structure.

The sensitivity of mentally retarded and nonretarded adults to changes in the structure of their perspectives when those changes are occluded from view during a walk was examined in two studies. Sensitivity was tested by starting participants at a target object located in one room of an unfamiliar office building, walking them via a circuitous path into a new room from which the target was occluded from view, and then asking them to aim a pointer straight at it. Direction judgments were collected across variations in the number of turns in the walk, spatial arrangements of rooms, amount of the subjects' attention available during the walk, and the availability of visual-environmental cues. Results indicate that retarded and nonretarded persons show similar levels of sensitivity to changes in perspective when they walk without visual-environmental cues (i.e., with eyes closed). In the presence of visual-environmental cues, however, the accuracy of nonretarded subjects increased dramatically whereas the retarded subjects did not improve at all. The similarities and differences in performance are related to differences in the perceptual learning thought to mediate use of proprioceptive cues and the inferential processes thought to mediate use of visual-environmental cues.

Adult↗
PubMed2002

Allee effect, spatial structure and species coexistence.

Both positive and negative interactions among species are common in communities. Until recently, attention has focused on negative interactions such as competition. However, the importance of positive interactions such as the Allee effect has recently been recognized. We construct a single-patch model that incorporates both an Allee effect and competition between two species. A species that experiences an Allee effect cannot establish in a patch which is already occupied by a competitor unless its density is over a critical value. This effect, when translated into a metapopulation, makes migrants of a species unable to colonize patches where another species has established. This interaction between the Allee effect and inter-specific competition creates and stabilizes spatial segregation of species. Therefore, under circumstances in which competition would preclude local coexistence, the presence of an Allee effect can allow coexistence at a metapopulation scale. Furthermore, we found that a species can resist displacement if stronger competitors experience an Allee effect.

Animals↗
PubMed2001

Spatial structure of brain electric fields during intermittent photic stimulation.

EEG changes in 27 young healthy male right-handed volunteers on intermittent photic stimulation (IPS) were estimated using global field power (GFP), EEG microstate modeling and analysis (EMMA), and low-resolution electromagnetic brain tomography (LORETA). The GFP significantly increased at flashing frequency and high harmonics. Three model maps were extracted with the EMMA procedure, from which high alternation rates of each microstate were observed. Moreover, two of the three model maps contributed very highly, occurring most frequently. LORETA imaging of the three model maps obtained from the EMMA procedure showed that both visual dominant cortical areas were activated, especially in the left hemisphere. These results suggest that IPS does not cause peculiar spatial configurations of the brain electric field, but does cause acceleration and deviation of the microstate alternation. Also, a functional laterality between hemispheres might be enhanced by symmetric IPS.

Adult↗
PubMed2006

Selective targeting of indel-inferred differences in spatial structures of homologous proteins.

The eukaryotic pathogen Leishmania donovani possesses a housekeeping protein Elongation-Factor-1alpha (EF-1alpha) which has been found to be unexpectedly involved in the pathogen's virulence. Because it is associated with virulence and essential for cell survival, this protein is an attractive choice for drug targeting; however, its sequence is highly similar (> 80% sequence identity) to that of its human homolog, rendering it a risky choice for a drug target. The chief difference between these two proteins has been found to be a 12 amino acid sequence present in human EF-1alpha but absent from leishmania EF-1alpha. Furthermore, it has been shown that this 12 amino acid insert in the human sequence corresponds to a hairpin loop on the surface of the protein. In this study, we searched for those spatial features in leishmania EF-1alpha that are impacted or obscured by the extra hairpin loop in the human counterpart. We have also conducted a large-scale in silico screening for small molecules that could plausibly bind to these protein features. While experimental evidence is required to verify our results, our findings thus far appear to support this approach as a new strategy for the development of antagonists against pathogenic targets having close human homologs.

Amino Acid Sequence↗
PubMed1992

Spatial structure of cone inputs to receptive fields in primate lateral geniculate nucleus.

Human colour vision depends on three classes of cone photoreceptors, those sensitive to short (S), medium (M) or long (L) wavelengths, and on how signals from these cones are combined by neurons in the retina and brain. Macaque monkey colour vision is similar to human, and the receptive fields of macaque visual neurons have been used as an animal model of human colour processing. P retinal ganglion cells and parvocellular neurons are colour-selective neurons in macaque retina and lateral geniculate nucleus. Interactions between cone signals feeding into these neurons are still unclear. On the basis of experimental results with chromatic adaptation, excitatory and inhibitory inputs from L and M cones onto P cells (and parvocellular neurons) were thought to be quite specific (Fig. 1a). But these experiments with spatially diffuse adaptation did not rule out the 'mixed-surround' hypothesis: that there might be one cone-specific mechanism, the receptive field centre, and a surround mechanism connected to all cone types indiscriminately (Fig. 1e). Recent work has tended to support the mixed-surround hypothesis. We report here the development of new stimuli to measure spatial maps of the linear L-, M- and S-cone inputs to test the hypothesis definitively. Our measurements contradict the mixed-surround hypothesis and imply cone specificity in both centre and surround.

Animals↗