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PubMed1984

Seminal plasma proteins of a line of chickens selected for fertility of frozen-thawed semen and the control line.

The seminal plasma from individual ejaculates of 13 males of a line of chickens selected for increased duration of fertility of frozen-thawed semen for 7 generations and 12 males of the control line were analyzed for proteins. The mean +/- SE total seminal plasma protein of the selected and control lines were 8.74 +/- .55 micrograms and 7.52 +/- .92 micrograms/microliter seminal plasma (P greater than .05). Crossed immunoelectrophoretic analysis of the seminal plasma generated, in general, 11 precipitant peaks in both lines. The protein corresponding to peak 11 of the electrophoretic pattern was significantly (P less than .01) higher in the selected line than in the control line, the mean +/- SE being 1.80 +/- .21 and .85 +/- .19 micrograms/microliter seminal plasma.

Animals↗

PubMed1998

Nucleotide sequencing of S-RNA segment and sequence analysis of the nucleocapsid protein gene of the newly isolated Akabane virus PT-17 strain.

The nucleotide sequences of the S-RNA of Akabane viruses JaGAr-39, OBE-1, Iriki and the newly isolated PT-17 strains and the Aino virus were determined and compared. The results reveal that the S-RNAs of the four Akabane strains share 96.9% homology in nucleotide sequences. Only one amino acid difference out of the 233 amino acids of the nucleocapsid protein (N) and three amino acid differences in the 91 amino acids of the nonstructural protein (NSs) were found among the Akabane viruses. Amino acid sequences of N and NSs proteins of the Aino virus have approximately 80% identity as compared with the Akabane viruses. The results also demonstrate that the four Akabane viruses and the Aino virus can be clearly differentiated by RFLP (restriction fragments length polymorphism) analysis using RT-PCR generated nucleocapsid protein genes and digested with HaeIII and HindIII. The phylogenetic tree based on the UPGMA (Unweighted Pair Group Method with Arithmetic Mean) analysis of the sequences of nucleocapsid protein genes and the S-DNAs revealed that the newly isolated PT-17 strain is most closely related to Iriki strain, than the JaGAr-39 or OBE-1 strains.

Amino Acid Sequence↗

PubMed1997

An automated procedure for cluster analysis of multivariate satellite data.

This paper studies the applicability of available cluster analysis methods on multivariate satellite data. Four different methods are studied, these are the Principal Component Analysis (PCA), K-means, Self Organizing Maps (SOM) and the Adaptive Resonance Theory (ART). Special focus is placed on the usefulness of these cluster analysis methods, that is, if the results generated by these methods are relevant and are of help to the physical analysis of the data. A combined SOM adaptive dynamic K-means procedure suitable for automated cluster analysis is presented. This new method is capable of achieving useful partition of multivariate satellite data which has not previously been studied.

Algorithms↗

PubMed2000

Economic impact of increased clinical intervention rates in community pharmacy. A randomised trial of the effect of education and a professional allowance.

OBJECTIVE: To determine the economic impact of an interventional programme aimed to increase the rate of clinical interventions undertaken in community pharmacy. STUDY DESIGN AND PERSPECTIVE: A randomised controlled trial of 4 parallel groups of pharmacies, conducted from a government perspective. Economic evaluations were based on savings/costs attributable to healthcare costs avoided, healthcare costs incurred by the pharmacists' actions, change in medication costs, pharmacy time and telephone calls made by the pharmacist. The study was conducted during November and December 1996 and costings were based on 1997 figures. INTERVENTIONS: A professional fee-for-service [10 Australian dollars ($A; $A1 = 6.50 US dollars) per intervention] and education (an intensive 1-week course or advanced education) were implemented in an attempt to increase clinical interventions by the pharmacists. Group A pharmacies (n = 10) served as a control group and received neither education nor remuneration; group B received education and professional remuneration (n = 9); group C had received prior continued education and now received advanced education and professional remuneration (n = 11); and group D received professional remuneration with no education. MAIN OUTCOME MEASURES AND RESULTS: The proactive clinical interventions in group C saved a mean of $A85.35 per 1000 prescriptions [95% confidence interval (CI)-$A157.11 to $A24.95). This was 4 times greater than savings generated by pharmacies in group B (mean savings of $A25.65 per 1000 prescriptions) and 6 times greater than control pharmacies. A sensitivity analysis which extrapolated results to Australian prescription figures showed that the control group was capable of generating savings in the order of $A2.4 million per year while pharmacists in group C would save the healthcare system $A15 million per year. CONCLUSIONS: These results provide the first economic estimates for the provision of clinical interventions in Australian community pharmacies. It is believed that they illustrate the value of pharmaceutical services to the healthcare system and to the Australian community in terms of both quality of care and savings.

Australia↗

PubMed2005

Using BNP to develop a risk score for heart failure in primary care.

AIMS: Chronic heart failure is a common condition with high mortality. Accurate diagnosis in primary care is difficult. Elevated B-type natriuretic peptide (BNP) is associated with left ventricular systolic dysfunction and increased mortality. Prognostic scoring systems using BNP may help to stratify risk in primary care patients. The aim of this research was to establish the independent variables which predict mortality in a primary care population-prescribed loop diuretics and to generate and validate a scoring system for heart failure in general practice. METHODS AND RESULTS: Five hundred and thirty-two patients were followed up for a mean of 6.4 years after attending a research clinic for clinical assessment, electrocardiogram (ECG), echocardiography, and BNP. Multivariate analysis was used to establish independent prognostic variables and to generate a prognostic scoring system. The score generated was [0.50 x BNP+5 x age+50 x (CVA+sex+diabetes+ECG)]. The cut-off scores for risk groups were; 25th percentile, 411; 50th percentile, 475; 75th percentile, 524; Harrell's c=0.75. CONCLUSION: Developing prognostic scoring systems provides a means of risk stratifying patients without relying on a single cut-off diagnostic value for BNP. Further validation of such scoring systems may improve future management of community heart failure patients.

Aged↗

PubMed1984

Comparison of heat stress measuring techniques in a steel mill.

Three heat stress measurement devices, currently used to assess heat exposure in the workplace, were compared in indoor and outdoor environments at a steel mill in Orem, Utah, during the month of July, 1982. Sixty sets of environmental data from a total of fourteen different test locations were collected and analyzed. Significance tests, linear regression equations and correlation coefficients were calculated to determine comparability and relationships between standard WBGT Index and Botsball (WGT) and also between standard WBGT Index and an electronic WBGT Index Meter. The results of the significance testing between the standard WBGT, Botsball, and electronically generated WBGT showed that the electronically generated WBGT means were statistically much closer to the standard WBGT values than were the Botsball (WGT) results. The statistical analysis performed shows that a high correlation of variation exists between the standard WBGT and both the Botsball and the electronically generated WBGT.

Environmental Exposure↗

PubMedDate not supplied

[The chromosomal localization of the major genes for the quantitative traits (QTL) of wheat by using D chromosome gene markers].

The possibility of biochemical and morphological marker genes application for QTL and determination of their association with definite D chromosomes was shown on F2 populations of bread wheat from crossing of hexaploids AABBDD with different D subgenomes and the same genome AB part. Algorithm for calculation of the theoretical means for evaluation of differences according t-criterion was proposed and examined. The results of biometrical genetic analysis of the quantitative traits obtained by joint scaling Cavalli test using 6-10 different generations were used for calculation of theoretical means.

Chromosome Mapping↗

PubMed1995

[Detection of myocardial 123I-BMIPP distribution abnormality in patients with ischemic heart disease based on normal data file in bull's-eye polar map].

Visual interpretation of 123I-BMIPP (BMIPP) myocardial images has difficulties in detecting mild reduction in tracer uptake. We studied the significance of the objective assessment of myocardial BMIPP maldistributions at rest by using a Bull's-eye map and its normal data file for detecting ischemic heart disease. Twenty nine patients, 15 with prior myocardial infarction and 14 with effort angina were studied. The initial 15-min BMIPP image was evaluated by visual analysis and by generating the extent Bull's-eye map which exhibits regions with reduced % uptake under mean-2SD of 10 normal controls. The sensitivity for determining coronary lesions in non-infarcted myocardial regions with the extent map was superior to that with visual analysis (67% vs. 33%). In the regions supplied by the stenotic coronary artery, those which showed visually negative but positive in the map and which showed positive in both had higher incidence of wall motion abnormalities and severe coronary stenosis than those with normal findings in both. These results suggest that the objective assessment based on the normal data file in a Bull's-eye polar map is clinically important for improving the limitation of the visual interpretation in 123I-BMIPP imaging.

Adult↗

PubMed2007

Numerical analysis of strongly nonlinear extensional vibrations in elastic rods.

In the framework of transduction, nondestructive testing, and nonlinear acoustic characterization, this article presents the analysis of strongly nonlinear vibrations by means of an original numerical algorithm. In acoustic and transducer applications in extreme working conditions, such as the ones induced by the generation of high-power ultrasound, the analysis of nonlinear ultrasonic vibrations is fundamental. Also, the excitation and analysis of nonlinear vibrations is an emergent technique in nonlinear characterization for damage detection. A third-order evolution equation is derived and numerically solved for extensional waves in isotropic dissipative media. A nine-constant theory of elasticity for isotropic solids is constructed, and the nonlinearity parameters corresponding to extensional waves are proposed. The nonlinear differential equation is solved by using a new numerical algorithm working in the time domain. The finite-difference numerical method proposed is implicit and only requires the solution of a linear set of equations at each time step. The model allows the analysis of strongly nonlinear, one-dimensional vibrations and can be used for prediction as well as characterization. Vibration waveforms are calculated at different points, and results are compared for different excitation levels and boundary conditions. Amplitude distributions along the rod axis for every harmonic component also are evaluated. Special attention is given to the study of high-amplitude damping of vibrations by means of several simulations. Simulations are performed for amplitudes ranging from linear to nonlinear and weak shock.

Acoustics↗

PubMed1984

Recombination in adenovirus: analysis of crossover sites in intertypic overlap recombinants.

Overlap recombination has been used as a means of generating intertypic recombinants with crossover sites located within a defined region of the adenovirus genome. Using terminal DNA fragments of adenovirus type 2 and type 5 that overlap within the vicinity of the hexon coding region (51.6-59.7 map units), two different crosses could be studied; in one the overlap entirely encompasses the hexon and there are homologous regions at either side of the overlap where recombination is expected, and in the other only one side of the overlap is capable of sustaining recombination. The overall distribution of crossover sites within the overlap has been determined by restriction endonuclease mapping, and analysed in terms of the extent of homology between Ad2 and Ad5 in this region as defined by the DNA sequences (R. Kinloch, N. Mackay, and V. Mautner (1984). J. Biol. Chem., 259, 6431-6436; G. Akusjärvi, P. Aleström, M. Pettersson, M. Lager, H. Jörnvall, and U. Pettersson (1984). Submitted). Crossovers are found only in regions of relatively high DNA homology, as previously shown for intertypic recombination between temperature-sensitive viruses (M. E. G. Boursnell and V. Mautner (1981). Virology 112, 198-209). The presence of a free DNA end within the heterologous zone is insufficient to overcome the barrier to recombination. In crosses where recombination is confined to a relatively small homologous zone (45.9-53.0 mu) there is no special distribution of crossovers within the interval; no "hot spot" is discernible at the free DNA end, suggesting that a free DNA end is not especially recombinogenic, nor at the junction between the homologous and heterologous zones, suggesting that branch migration up to the heterology does not always occur. A cross designed to furnish evidence for gene conversion gave rise to a "conventional" recombinant with a crossover located within a 21-nucleotide tract of homology.

Adenoviruses, Human↗

PubMed1989

Generation of metastatic variants in populations of mutator and amplificator mutants.

Genetic instability has been hypothesized by P. C. Nowell and other investigators to be an important aspect of tumor progression that leads to the generation of metastatic variants. In this study we examined the rate of generation of metastatic variants in mutant cell lines having increased rates of spontaneous mutation and gene amplification. Parallel clonal populations of the spontaneous mutation rate mutant thy-49 and the gene amplification mutants YMP1 and YMP7 and their respective wild types were generated and grown to a critical population size. The number of metastatic variants in each clonal population was then determined following iv injection into nude mice. Lung tumors were scored 3-4 weeks after injection of cells, and the mean number per clonal population was determined. Analysis of the means with the Luria-Delbruck fluctuation test showed no significant differences in the rate of generation of metastatic variants produced in the genetically unstable lines compared to their normal counterparts. This study suggests that increased spontaneous mutation and gene amplification rates in mammalian cells are not sufficient on their own to increase the rate of generation of metastatic variants.

Animals↗

PubMed2005

Intravenous secretin for autism spectrum disorder.

BACKGROUND: Secretin is a gastro-intestinal hormone which has been presented as an effective treatment for autism based on anecdotal evidence. OBJECTIVES: To determine if intravenous secretin:1. improves the core features of autism (social interaction, communication and behaviour problems); 2. improves the non-core aspects of behaviour or function such as self injurious behaviour;3. improves the quality of life of affected individuals and their carers; 4. has short term and long term effects on outcome; 5. causes harm. SEARCH STRATEGY: Results of electronic searches of CENTRAL, MEDLINE, EMBASE, PsycINFO, CINAHL, ERIC, HealthStar and Sociofile (1998 - March 2005) were independently examined by two authors. Reference lists of trials and reviews were searched; experts and trialists were contacted to find unpublished studies. SELECTION CRITERIA: Randomised controlled trials of intravenous secretin comparing secretin with a placebo treatment in children or adults diagnosed with autism spectrum disorders, where at least one standardised outcome measure was reported. DATA COLLECTION AND ANALYSIS: Fourteen studies met inclusion criteria. All outcome data were continuous. Where trials used cross-over designs, analysis was conducted on results from first treatment phase, allowing combined analysis with parallel design trials. Where standardised assessment tools generated scores as outcome measures, comparisons were made between means of these scores. Where baseline means were reported, differences between treatment and control were determined to assess possible bias. Where mean change from baseline was reported, this was used in preference to post-treatment scores for meta-analyses or forest plots. As meta-analysis was possible for only one outcome (Childhood Autism Rating Scale), it was impossible to use sensitivity or subgroup analyses to assess impact of study quality, clinical differences in the intervention, or clinically relevant differences between groups, such as age or presence of gastrointestinal symptoms. MAIN RESULTS: Twenty-five established standardised outcome measures were reported to assess core features of autism, communication, behaviour, visio-spatial skills, affect and adverse events within fourteen included studies. No more than four studies used any one outcome measure similarly. Outcomes were reported between three and six weeks. RCTs of efficacy of secretin in autism have not shown improvements for core features of autism. AUTHORS' CONCLUSIONS: There is no evidence that single or multiple dose intravenous secretin is effective and as such it should not currently be recommended or administered as a treatment for autism. Further experimental assessment of secretin's effectiveness for autism can only be justified if methodological problems of existing research can be overcome.

Autistic Disorder↗

PubMed2006

[Volumetric measurement of human orbit by means of computed tomographic analysis based on CT scanning digital data].

OBJECTIVE: To establish and elucidate a feasible method by CT-scanning-based computed tomographic analysis for the volumetric measurement of orbit. METHODS: In this study, 19 dry intact dried skulls were used. CT digital data with continuous 0.625 mm transaxial sections was available for each and was inputted a professional tomographic analysis software in DICOM format. Subsequent to the orbital borderline lined on each of continuous axial images, software automatically generated three-dimensional orbital image and gave a value of orbital volume. In mean while, handicraft measurement of orbital volume was carried out for each and obtained another group of orbital volume value. Statistical analysis was made to test possible difference between two measurements. RESULTS: It was demonstrated that volumetric measurement by means of computed tomographic software had a accuracy of the 1.38%. Right and left orbital volumes were found to have a mean difference of 0.3 ml (0-1.4 ml). CONCLUSIONS: CT data-based computed tomographic analysis is a reliable method to measure orbital volume, which could be potentially used to determine the alternation of orbital volume after fracture.

Female↗

PubMed2000

[Composition by size, age and growth of Litopenaeus vannamei (Natantia: Penaeidae), in Mar Neutro lagoon, Oaxaca-Chiapas, Mexico].

The commercial catches of white shrimp Litopenaeus vannamei were sampled (May through November 1996) in the Mar Muerto lagoon located between Oaxaca and Chiapas states, Mexico. To measure it's growth rate at the innermost portions of this system, 16,378 length and weight records were obtained. Length fluctuated between 11 and 145 mm, and weights between 0.1 and 26.3 g. The minimum mean size for recruitment to the exploited phase is 45 mm. Organisms leave the lagunar system for recruitment to the marine zone 83-120 mm/length, at an age of 1.5-4.5 months. Analysis of modal progression detected 13 generations inside the lagoon. The growth rates ranged between 0.13 and 1.27 mm/day, with a mean of 0.64 mm/day. The asintotic lengths fluctuated between 105 and 159 mm with a mean of 136 mm, while the asintotic weight fluctuated between 8 and 23 gr with a mean of 15 gr. The parameters of the von Bertalanfy growth model are: L infinity = 136 mm, P infinity = 15 gr, k = 0.0161 mm and to = 5 mm. Both, L infinity and P infinity doesn't represent, at least in this case, the asintótics sizes and weights that the species reach inside the system, but should be interpret like the means sizes and weight that should have the organisms at the time to leave it.

Animals↗

PubMed2001

Environmental initiative prioritization with a Delphi approach: a case study.

India is fast finding its place in the industrialized world and that is beginning to raise its environmental consciousness. The Delphi technique was used to prioritize specific needs and articulate a sustainable urban improvement strategy for the city of Mumbai (formerly Bombay). The Delphi technique is a means of achieving consensual validity among raters by providing them feedback regarding other raters' responses. Mumbai has several indigenous environmental groups that were tapped for activists and leaders; the study was conducted using ten environmentalists. In the initial phases the responses resulted in a range of possible program alternatives. The last two stages helped to seek out information that generated a consensus on the part of the respondent group. Statistical analysis methods included a hierarchical cluster analysis, mean, median, mode, and percent of agreement calculations using SPSS software. The face-to-face discussion in phase 4 clarified some issues and helped the group as a whole to outline the strategy for putting in place the essential elements of a framework to improve the quality of life in an urban environment.

Adult↗

PubMed2004

Variability analysis of the respiratory volume based on non-linear prediction methods.

This work proposed and studied a method of automatically classifying respiratory volume signals as high or low variability by means of non-linear analysis of the respiratory volume. The analysis used volume signals generated by the respiratory system to construct a model of its dynamics and to estimate the quality of the predictions made with the model. Different methods of prediction evaluation, prediction horizons and embedding dimensions were also analysed. Assessment of the method was made using a database that contained 40 respiratory volume signals classified using clinical criteria into two classes: low or high variability. The results obtained using the method of surrogate data provided evidence of non-linear determinism in the respiratory volume signals. A discriminant analysis carried out using non-linear prediction variables classified the respiratory volume signals with an accuracy of 95%.

Humans↗

PubMed1996

A computer-controlled apparatus for measuring and analysing myoclonic jerk activity in guinea pigs.

Guinea pigs respond to 5-hydroxytryptophan (5-HTP) with a complex behavioural syndrome which includes distinctive whole-body jerks (myoclonic jerks). These are species-specific, involve all major muscle groups, are highly rhythmic and can occur with relatively high frequency (1-2/s). Current methods of quantifying the response, which rely on observer ratings are unsatisfactory. We report the development of a fully automated, PC-based system for detecting and analysing myoclonic jerks. Floor-mounted accelerometers generate a movement signal and detection is performed by an algorithm based on a detailed analysis of the topography of myoclonic jerk responses. The system can monitor the output from 10 purpose-built test enclosures and it provides for pseudorandom treatment allocation, flexible control of experimental parameters and automated data output to a spreadsheet which generates appropriate graphs, statistical summaries and data analysis. This robust response provides a useful means of exploring the role of novel 5-HT receptor subtypes in guinea-pig behaviour.

Algorithms↗

PubMed2005

The effect of maternal and grandmaternal age in benign and high temperature environments.

Maternal age is known to be of importance for the fitness of the offspring. Few studies have, however, been able to analyse this phenomenon as an isolated effect without confounding effects through genetic variation. This difficulty can be circumvented by working with parthenogenetic organisms. We investigated the effect of maternal and grandmaternal age on wing traits, pupal survival and developmental instability (DI) in both a benign and a high temperature environment using two different parthenogenetic strains of Drosophila mercatorum. Both the maternal and grandmaternal age was found to influence all the traits. Two opposing factors seem to shape the effects of maternal age. Senescence in older mothers leads to a reduction in offspring fitness, whereas, plastic responses lead to more competitive and stress resistant offspring from older mothers. The relative importance of these factors is trait specific and is influenced by environmental factors. DI is mostly influenced by senescence whereas wing sizes are influenced mostly by plastic responses towards higher competition. This means that any analysis of fitness should take age composition of at least two generations into account.

Aging↗