Visual pattern analysis in machines and animals.
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Animals↗
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Favored patterns in spike trains. I. Detection.
Traditional spike-train analysis methods cannot identify patterns of firing that occur frequently but at arbitrary times. It is appropriate to search for recurring patterns because such patterns could be used for information transfer. In this paper, we present two methods for identifying "favored patterns" --patterns that occur more often than is reasonably expected at random. The quantized Monte Carlo method identifies and establishes significance for favored patterns whose detailed timing may vary but that do not have extra or missing spikes. The template method identifies favored patterns whose occurrences may have extra or missing spikes. This method is useful when employed after the results of the first method are known. Studies with simulated spike trains containing known interpolated patterns are used to establish the sensitivity and accuracy of the quantized Monte Carlo method. Certain trends with regard to parameters of the detected patterns and of the analysis methods are described. Application of these methods to neurophysiological data has shown that a large proportion of spike trains have favored patterns. These findings are described in the accompanying paper (3).
Action Potentials↗
Neural activity in cortical area MST of alert monkey during ocular following responses.
1. We studied response properties of neurons in the superior temporal sulcus (STS) of behaving monkeys that discharged during brief, sudden movements of a large-field visual stimulus, eliciting ocular following. Most neurons responded to movements of a large-field visual stimulus with directional selectivity, preferring high stimulus speeds. Neurons were mostly recorded in the medial superior temporal area (MST) (187/250) and the middle temporal area (MT) (57/250). Further response properties were studied in the MST neurons. 2. Response latencies were measured when a large-field random dot pattern was moved in the preferred direction and preferred speed for each neuron. Eighty percent (120/150) of the neurons were activated < 50 ms after the onset of the stimulus motion. In most cases (89%, 134/150), increased firing rates started before the eye movements, with 59% (88/150) starting > 10 ms before the eye movements. 3. The relationship between the latency of neuronal responses and that of eye movements was studied in 59 neurons by changing the stimulus speed systematically (10-160 degrees/s). The latencies of both neuronal and ocular responses decreased as stimulus speed increased. As a result, the time difference between the response latencies for neuronal and ocular responses varied little with changes in stimulus speed. 4. Blurring of the random dot pattern, by interposing a sheet of ground glass, increased the latency of both neuronal responses and eye movements. 5. With the use of a check pattern instead of random dots, both neuronal and ocular responses began to decrease rapidly when the temporal frequency of the visual stimulus exceeded 20 Hz. At 40 Hz the neurons showed a distinctive burst-and-pause firing pattern, and the eye movements showed signs of oscillation. 6. The response properties of the MST neurons during ocular following were similar to those of the dorsolateral pontine nucleus (DLPN) neurons, reported previously. Our results indicate that the MST neurons may provide visual information to the DLPN neurons and may play a role in eliciting ocular following. 7. Responses during smooth-pursuit eye movement were studied in 55 MST neurons. Each of these neurons responded to the moving large-field visual stimulus, which elicited ocular following, and 40 of these neurons were activated during smooth pursuit in the dark. Response latencies during smooth pursuit were long in those neurons having different directional preferences during smooth pursuit and ocular following but were short for those having the same directional preferences during smooth pursuit and ocular following.(ABSTRACT TRUNCATED AT 400 WORDS)
Animals↗
Saccade target selection in visual search: accuracy improves when more distractors are present.
We report four experiments with search displays of Gabor patches. Our aim was to study the accuracy of gaze control in search tasks. In Experiment 1, a target was presented with a single distractor Gabor of a different spatial frequency on the same axis. Subjects could locate the target with the first saccade if the distractor was more distant, but when the distractor was between the fixation point and the target, the first saccade landed much closer to the distractor. In Experiment 2, the number of display items was increased to 16 in a double ring configuration. With this configuration, first saccades were accurately directed to the target, even when there was an intervening distractor in exactly the same configuration as in Experiment 1. Experiment 3 suggested that the improvement in accuracy was not due to distractor homogeneity but rather may be attributable to the increased first saccade latency with the ring configuration. In the final experiment, latency was shown to covary with saccade accuracy. The results are related to a general framework whereby the presence of distractors operates to hold fixation for a longer period of time, thus allowing a greater period of visual processing and more accurate eye movements.
Adult↗
Pattern motion integration in infants.
To investigate the development of motion integration in infants, we used an eye movement technique to measure subjects' ability to track leftward versus rightward pattern motion in a stimulus consisting of a field of spatially segregated moving gratings. Each grating moved in one of two oblique directions, with the two directions interleaved across the display. When spatially integrated, pattern motion for these paired component motions was either rightward or leftward. To control for the possibility that horizontal eye movements elicited by this stimulus were due to the horizontal motion vector present in each obliquely moving grating, we also measured responses to a field where every grating moved in the same oblique direction. The difference in performance between the integration stimulus and this control stimulus was taken as a measure of integration. Data from 2-, 3-, 4-, and 5-month-old infants revealed significant motion integration, suggesting that higher order motion areas, such as the middle temporal area (MT) may develop at a relatively early age. In addition, the integration effect decreased consistently and significantly with age (p <.005), suggesting a reduction in the spatial extent of motion integration over the course of development.
Adult↗
Perception of color and material properties in complex scenes.
How do human observers estimate the location, form, and color of objects? Accurate estimation is challenging because the light arriving at the eyes depends not only on object properties, but also on the spectra and spatial layout of the light sources (Nassau, 1983; Foley et al., 1990). How well the visual system separates illuminant and object properties to achieve a stable representation has traditionally been studied under the rubric of color and lightness constancy. Most previous work used very simple stimuli, typically a few diffusely illuminated surfaces arranged perpendicular to the line of sight. Over the past several years, however, there has been an evident increase of interest in expanding the conceptualization of this area to incorporate effects that emerge only for complex, typically three-dimensional, scenes. The current issue features papers that represent various manifestations of this interest. One line of research investigates how the three-dimensional layout of a scene affects the perception of lightness and color. Although the current work has long-standing antecedents (e.g. Mach, 1886/1959; Hochberg and Beck, 1954; Gilchrist, 1980), methodological advances in i) experimentation with real illuminated objects (e.g. Brainard et. al, 1987; Rutherford and Brainard, 2002; Ripamonti et al., 2004; Robilotto and Zaidi, 2004), ii) the use of sophisticated graphics simulations (e.g. Yang and Maloney, 1999; Fleming, Dror, & Adelson, 2003; Boyaci, Maloney, & Hersh, 2003; Delahunt and Brainard, 2004), iii) the design of hybrid systems that combine real objects with image-based graphics and video projection (Ling and Hurlbert, 2004), and iv) psychophysical procedures (Maloney and Yang, 2003; Obein, Knoblauch, & Vienot, 2004) have opened the door for systematic exploration of a wider range of phenomena. Recent papers include work on how well vision compensates for changes in surface orientation (Boyaci et al., 2003; Ripamonti et al., 2004), how effectively it discounts inter-reflections among nearby surfaces (Bloj, Kersten, & Hurlbert, 1999; Doerschner, Boyaci, & Maloney, 2004; Delahunt and Brainard, 2004), and how the visual system effectively estimates the spectral properties and spatial layout of the illuminant in three-dimensional scenes (Kraft & Brainard, 1999; Yang & Maloney, 1999; Boyaci, Maloney, & Hersh, 2003; Bloj et al., 2004; Boyaci, Doerschner, & Maloney, 2004; Khang and Zaidi, 2004). The second thread that leads to papers in the current issue is a focus on the functional utility of color and lightness perception -- the idea that these percepts inform us about the properties of objects rather than those of light spectra. This focus resulted in a renaissance of research in color constancy over the past two decades, with particular progress being made in the development of computational models that explore how, in principle, object surface properties can be estimated from image data. As with the experimental lines, early work focused on simple scene geometries (for reviews see Hurlbert, 1998; Maloney, 1999) but consideration has recently expanded to three-dimensional configurations (Adelson and Pentland, 1996; Yang and Maloney, 1999; Bell and Freeman, 2001; Dror, Willsky, & Adelson, 2004) Of particular interest has been the elaboration of purely computational formulations into parametric models of human performance (e.g. Brainard Brunt, & Speigle, 1997; Brainard Kraft, & Longere, 2003; Boyaci et al., 2003; Doerschner et al., 2004; Boyaci et al., 2004; Bloj et al., 2004), tests of how well the visual system exploits image information identified in computational studies (Yang and Maloney, 2001; Delahunt and Brainard, 2004; Smithson and Zaidi, 2004), investigations of how well the visual system recovers perceptual correlates of material properties other than diffuse surface reflectance, such as gloss and translucency (Lu, Koenderink, & Kappers, 2000; Fleming et al., 2003; Pont & Koenderink, 2003; Obein et al., 2004), as well as how geometric aspects of surface reflectance interact with the perception of shape (Fleming et al., 2003).
Color Perception↗
A literature-based similarity metric for biological processes.
BACKGROUND: Recent analyses in systems biology pursue the discovery of functional modules within the cell. Recognition of such modules requires the integrative analysis of genome-wide experimental data together with available functional schemes. In this line, methods to bridge the gap between the abstract definitions of cellular processes in current schemes and the interlinked nature of biological networks are required. RESULTS: This work explores the use of the scientific literature to establish potential relationships among cellular processes. To this end we have used a document based similarity method to compute pair-wise similarities of the biological processes described in the Gene Ontology (GO). The method has been applied to the biological processes annotated for the Saccharomyces cerevisiae genome. We compared our results with similarities obtained with two ontology-based metrics, as well as with gene product annotation relationships. We show that the literature-based metric conserves most direct ontological relationships, while reveals biologically sounded similarities that are not obtained using ontology-based metrics and/or genome annotation. CONCLUSION: The scientific literature is a valuable source of information from which to compute similarities among biological processes. The associations discovered by literature analysis are a valuable complement to those encoded in existing functional schemes, and those that arise by genome annotation. These similarities can be used to conveniently map the interlinked structure of cellular processes in a particular organism.
Databases, Bibliographic↗
Effects of pattern, spatial frequency, number, and rate of stimulus presentation on the accuracy of detection.
Brief trains of pulsed stimuli were used to assess whether magnocellular or parvocellular visual pathways could be differentiated perceptually. Trains of either one to four sine-wave, square-wave, or checkerboard gratings were presented at three temporal and two spatial frequencies to six observers. The task of the observer was to report the perceived number of stimuli (gratings) in a train. The difference between actual number and perceived number of gratings was recorded as an error score. It was found that neither the pattern nor the spatial frequency of the gratings significantly affected perceptual accuracy. On the other hand, the number of gratings in a train and the interstimulus interval between gratings produced significant differences. Perceptual accuracy was greater when lower numbers of gratings in a train were presented with longer interstimulus intervals. The observers typically reported fewer stimuli than were presented. The source of the discrepancy is discussed in terms of a light adaptive process initiated in the retina.
Adolescent↗
Pattern of cortical activity, degree of synchronization, binocular fusion, and binocular rivalry.
The synchronization hypothesis is the likely idea for the binding problem in the brain. Here we tested whether the theory is applicable for the occurrence of either binocular fusion or binocular rivalry. We first showed patterns of activated patches in V1 with proceeding from fusion to rivalry on the basis of Hubel and Wiesel's 1979 illustration. We then assumed that the strength of synchrony between the patches in the left-eye and right-eye ocular dominance columns is a crucial determinant for the divergence between fusion and rivalry. By using the strength of fusion between the paired images as a measure of degree of synchrony, we confirm the assumption about interocular vision and the synchronization hypothesis as well.
Form Perception↗
Local pattern electroretinograms and ganglion cell activity in the turtle eye.
1. Local electroretinograms and spike activity from ganglion cells were recorded from an eye cup preparation of the turtle retina. The responses were elicited with striped and plaid stimulus patterns. 2. The results obtained with the two forms of recording were highly similar. Both depended on the spatial phase of the pattern with respect to the recording electrode. Both had maximal response at the same stimulus spatial frequency. 3. The optimum spatial frequency (both for maximum electroretinogram amplitudes and spike discharge rates) shifted to lower values with the administration of the GABA antagonist, picrotoxin. 4. The low frequency falloff associated with this spatial tuning may point to a mechanism of lateral interactions common to the local electroretinogram and spike responses.
Animals↗
Neural correlates of successful encoding identified using functional magnetic resonance imaging.
Neural activity that occurs during the creation of a new memory trace can be observed using functional magnetic resonance imaging (fMRI). Event-related designs have been used to demonstrate that activity in prefrontal and medial temporal lobe areas is associated with successful memory storage. Here we contrasted activity associated with encoding success and encoding effort. Participants viewed a series of 150 words but attempted to remember only half of them. Encoding effort was manipulated using a cue in the form of a letter (R or F) presented after each word to instruct participants either to remember or to forget that word. Increased activity in left inferior prefrontal cortex was observed when words were followed by the cue to remember. In contrast, increased left medial temporal lobe activity was observed for words that were successfully recalled later. These results show that fMRI correlates of the intention to encode a word are different from fMRI correlates of whether that encoding is successful. Prefrontal activation was strongly associated with intentional verbal encoding, whereas left medial temporal activation was crucial for the encoding that actually led to successful memory on the subsequent test.
Adolescent↗
Biomimetic machine vision system.
Real-time application of digital imaging for use in machine vision systems has proven to be prohibitive when used within control systems that employ low-power single processors without compromising the scope of vision or resolution of captured images. Development of a real-time machine analog vision system is the focus of research taking place at the University of Wyoming. This new vision system is based upon the biological vision system of the common house fly. Development of a single sensor is accomplished, representing a single facet of the fly's eye. This new sensor is then incorporated into an array of sensors capable of detecting objects and tracking motion in 2-D space. This system "preprocesses" incoming image data resulting in minimal data processing to determine the location of a target object. Due to the nature of the sensors in the array, hyperacuity is achieved thereby eliminating resolutions issues found in digital vision systems. In this paper, we will discuss the biological traits of the fly eye and the specific traits that led to the development of this machine vision system. We will also discuss the process of developing an analog based sensor that mimics the characteristics of interest in the biological vision system. This paper will conclude with a discussion of how an array of these sensors can be applied toward solving real-world machine vision issues.
Algorithms↗
Visual-evoked response binocular summation in normal and strabismic infants. Defining the critical period.
Pattern visual-evoked response binocular summation (VERBS) was recorded in normal infants, between the ages of 1-58 months, and in similar-aged esotropic infants before and at various times after corrective surgery. The normal subjects had no significant VERBS at 1.5 months of age, developed a rapid acceleration of VERBS between 1.5-3 months, and then gradually declined in VERBS from 3-58 months. The peak of the VERBS by age function at 3 months was well in the facilitation range (greater than 2.0) and corresponded to the general age range for the onset of binocular eye alignment, fusion, and stereopsis. The results from the early-onset esotropic patients revealed a similar function to that found in normal subjects; however, the function was triggered by surgical eye alignment. The peak of the VERBS function for esotropic subjects was lower than normal, and the initial rise was less rapid. It is proposed that the VERBS function reflects the human critical period for the development of binocular vision. In this framework, data from both infant developmental studies and adult studies were clarified.
Adolescent↗
[Measurement of visual acuity using visual evoked potentials obtained by stimulation by reversal of checker-board sight (pattern)].
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Evoked Potentials↗
[The objectivation of auditory and optical imaginations in the electroencephalogramm (author's transl)].
This study describes two new DC-potentials, which are related to auditory or optical imagination. The "auditory imagination potential" (AIP) is a negative DC-shift on the vertex lasting during the whole period of an auditory imagination. During an optical imagination there is a similar negative DC-shift in the ocipital region only. These "imagination potentials" can be already recognized in the "raw-EEG" by means of a special experimental technique. The magnitude of amplitudes correlates with the degree of concentration of the subject. In the case of intense imaginations potentials with amplitudes up to 20 muV and a duration of some seconds are recorded. The comparison between the vertex and the occipital lead permits the examination of the alternate occurence of auditory and optical conscious processes. The "imagination potentials" (AIP and OIP) are not related to any external stimulation or motor reaction and represent modality-specific EEG-correlates of cognitive, conscious processes (memory and imagination). Their significance for the "objective audiometry" is discussed.
Acoustics↗
Critical problems in spatial vision.
In recent years the study of spatial vision seems to have come almost full circle. Localized stimuli (such as lines, bars, and edges) were abandoned in favor of textured patterns (such as sinusoidal gratings), a trend that was accelerated by the discovery that gratings of sufficiently different spatial frequencies or orientations (stimuli localized in the Fourier domain) were detected independently. This led to various attempts to model form vision in terms of spatial frequency analysis. More recently there has been a shift toward models that include, once again, the local aspects of spatial processing; this trend is more consistent with both retinal and cortical physiology. (Still surviving is the notion of a complete set of orthonormal basis functions, but not sinusoidal ones.) Other important developments include attempts to model spatiotemporal interaction, and the discovery that spatial processing takes on an entirely different character in the absence of any temporal variation (i.e., when the retinal image is stabilized). We attempt to trace these developments in terms of a selected group of representative studies, which we examine in some depth.
Biomedical Engineering↗
Short-term reorganization of the cortical network? Some questions from visual psychophysics.
Research into visual system function requires the use of test stimuli as (would-be) neutral probes. Although the risk of transient 'fatigue' is well recognized, e.g. in relation to dark adaptation, we tend otherwise to assume that the system will respond reversibly to stimuli within normal physiological limits. It is on this assumption that gratings of near-parallel lines, for example, are commonly used to determine both physiological and psychophysical response characteristics. This paper reviews evidence suggesting that certain classes of visual stimuli, including gratings in particular, can induce a short-term cooperative reorganization of the visual network that leaves it far from normal in its responsiveness to other inputs. It is suggested that the resulting abnormalities may help to shape our ideas as to the cooperative ensemble properties of cortical neuronal network.
Animals↗
Evolution of nervous systems and psychiatry: consequences of the vertical and horizontal duality of the evolutionary process.
Jacksonian views of brain evolution where new levels "add on" and become higher levels of integration "keeping down" the lower levels are examined. The hierarchical organization is contrasted with modern views of the evolution of nervous systems. These emphasize the "separation or factorization of different aspects of input into distinct processing channels, a factor which appears to be a generalized one in the evolution of brains and a necessary condition to adapt to a varying environment." The advantages of the latter view--vertical and horizontal development--for the interpretation of functional organization of nervous systems are discussed. The view that normal and pathological conditions do not form a continuum, but constitute qualitatively different phenomena, is presented and given support because of recent developments in neuroscience.
Animals↗