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PubMed1991

Isolation and nucleotide sequence of the Thiobacillus ferrooxidans genes for the small and large subunits of ribulose 1,5-bisphosphate carboxylase/oxygenase.

The genes encoding for the large (rbcL) and small (rbcS) subunits of ribulose-1,5-bisphosphate carboxylase (RuBisCO) were cloned from the obligate autotroph Thiobacillus ferrooxidans, a bacterium involved in the bioleaching of minerals. Nucleotide sequence analysis of the cloned DNA showed that the two coding regions are separated by a 30-bp intergenic region, the smallest described for the RuBisCO genes. The rbcL and rbcS genes encode polypeptides of 473 and 118 amino acids, respectively. Comparison of the nucleotide and amino acid sequences with those of the genes for rbcL and rbcS found in other species demonstrated that the T. ferrooxidans genes have the closest degree of identity with those of Chromatium vinosum and of Alvinoconcha hessleri endosymbiont. Both T. ferrooxidans enzyme subunits contain all the conserved amino acids that are known to participate in the catalytic process or in holoenzyme assembly.

Amino Acid Sequence↗

PubMedDate not supplied

[Attachment of Sulfobacillus thermosulfidooxidans cells to the surface of sulfide minerals].

The behaviour of Sulfobacillus thermosulfidooxidans cells in cultures growing at 50 degrees C in the autotrophic conditions with intensive stirring of the medium was studied by phase-contrast and electron microscopy. The following compounds (at a concentration of 1%) were used as an energy source: pyrite, chalcopyrite, arsenopyrite, antimonite, galenite, sphalerite, and copper-zinc-pyrite ore. A considerable part of cells was found to be attached to the surface of crystals in the course of oxidation of the above sulfide minerals. Adhesion of cells to the surface of minerals was accomplished by means of abundant slime formation. The cell produced slime at the highest rate by those parts of its surface which was adjacent to the mineral. Apparently, the chemoreceptor apparatus of the cell was involved in the process of adhesion. Appendages of an unknown nature were found in cells growing on pyrite. Presumably, cells are anchored to the surface of minerals by these structures.

Microscopy, Electron↗

PubMed2005

Controversies on the origin of life.

Different viewpoints, many with deep philosophical and historical roots, have shaped the scientific study of the origin of life. Some of these argue that primeval life was based on simple anaerobic microorganisms able to use a wide inventory of abiotic organic materials (i.e. a heterotrophic origin), whereas others invoke a more sophisticated organization, one that thrived on simple inorganic molecules (i.e. an autotrophic origin). While many scientists assume that life started as a self-replicative molecule, the first gene, a primitive self-catalytic metabolic network has also been proposed as a starting point. Even the emergence of the cell itself is a contentious issue: did boundaries and compartments appear early or late during life's origin? Starting with a recent definition of life, based on concepts of autonomy and open-ended evolution, it is proposed here that, firstly, organic molecules self-organized in a primordial metabolism located inside protocells. The flow of matter and energy across those early molecular systems allowed the generation of more ordered states, forming the cradle of the first genetic records. Thus, the origin of life was a process initiated within ecologically interconnected autonomous compartments that evolved into cells with hereditary and true Darwinian evolutionary capabilities. In other words, the individual existence of life preceded its historical-collective dimension.

Biological Evolution↗

PubMed1969

Microbial dissimilatory sulfur cycle in acid mine water.

Ferric, sulfate, and hydrogen ions are produced from pyritic minerals associated with coal as a result of autotrophic bacterial metabolism. Water carrying these ions accumulated behind a porous dam composed of wood dust originating at a log-cutting mill. As water seeped through the porous dam, it was enriched in organic nutrients which then supported growth and metabolism of heterotrophic bacteria in the water downstream from the dam. The heterotrophic microflora within and below the sawdust dam included dissimilatory sulfate-reducing anaerobic bacteria which reduce sulfate to sulfide. The sulfide produced caused the chemical reduction of ferric to ferrous ion, and black FeS precipitate was deposited on the pond bottom. A net increase in the pH of the lower pond water was observed when compared to the upper pond water. Microbial activity in the wood dust was demonstrated, and a sequence of cellulose degradation processes was inferred on the basis of sugar accumulation in mixed cultures in the laboratory, ultimately yielding fermentation products which serve as nutrients for sulfate-reducing bacteria. Some of the microorganisms were isolated and characterized. The biochemical and growth characteristics of pure culture isolates were generally consistent with observed reactions in the acidic environment, with the exception of sulfate-reducing bacteria. Mixed cultures which contained sulfate-reducing bacteria reduced sulfate at pH 3.0 in the laboratory with sawdust as the only nutrient. Pure cultures of sulfate-reducing bacteria isolated from the mixed cultures did not reduce sulfate below pH 5.5.

Bacteria↗

PubMed2006

Biosolids from two-stage bioleaching could produce compost for unrestricted use.

A biological process, called BIOSOL, developed in our laboratory, efficiently reduces metals and reduces pathogenic indicator bacteria in sewage sludges in a single-stage system to levels meeting Ontario Ministry of the Environment (OME) requirements for land application of biosolids. Since the requirements for unrestricted use of compost are 10 to 50 times (depending on the metal involved) more restrictive than those for land application, this study was carried out to determine whether the efficiency of the BIOSOL system could be increased to meet the more stringent limitations required for compost. A two-stage modified BIOSOL system was successfully operated for a period of 4% months, at 30 degrees C, treating anaerobically digested sludge from the Guelph Wastewater Treatment Plant. Elemental sulphur (4g l(-1)) was the energy source for the autotrophic bacteria (thiobacilli). The pH, metals (Cd, Cr, Cu, Pb and Zn), and sulphate were used to evaluate system effectiveness. At an HRT of 8 days in each solubilization tank, and a S*-concentration of 4g l(-1), sulphur oxidation efficiency was about 70%, while the metal removals were: Cd 90%, Cr 93%, Cu 96%, Pb 67% and Zn 98%. The finished product (biosolids) met the OME requirements for metal concentrations for producing compost or fertilizer for unrestricted use. The reduction of pathogenic indicator organisms was demonstrated in earlier studies.

Biodegradation, Environmental↗

PubMed1997

Stable-Isotope Analysis of a Combined Nitrification-Denitrification Sustained by Thermophilic Methanotrophs under Low-Oxygen Conditions.

To simulate growth conditions experienced by microbiota at O(inf2)-limited interfaces of organic matter in compost, an experimental system capable of maintaining dual limitations of oxygen and carbon for extended periods, i.e., a pO(inf2)-auxostat, has been used. (sup15)N tracer studies on thermophilic (53(deg)C) decomposition processes occurring in manure-straw aggregates showed the emission of dinitrogen gas from the reactor as a result of simultaneous nitrification and denitrification at low pO(inf2) values (0.1 to 2.0%, vol/vol). The N loss was confirmed by nitrogen budget studies of the system. Depending on the imposed pO(inf2), 0.6 to 1.4 mmol of N/day (i.e., 20 to 40% of input N) was emitted as N(inf2). When the pO(inf2) was raised, the rates of both nitrification and denitrification increased instantaneously, indicating that ammonia oxidation was limited by oxygen. In auxostats permanently running at pO(inf2) >= 2% (vol/vol), the free ammonium pool was almost completely oxidized and was converted to nitrite plus nitrate and N(inf2) gas. Labelling of the auxostat with [(sup13)C]carbonate was conducted to reveal whether nitrification was of autotrophic or heterotrophic origin. Incorporation of (sup13)CO(inf2) into population-specific cellular compounds was evaluated by profiling the saponifiable phospholipid fatty acids (FAs) by using capillary gas chromatography and subsequently analyzing the (sup13)C/(sup12)C ratios of the individual FAs, after their combustion to CO(inf2), by isotope ratio mass spectrometry. Apart from the observed label incorporation into FAs originating from a microflora belonging to the genus Methylococcus (type X group), supporting nitrification of a methylotrophic nature, this analysis also corroborated the absence of truly autotrophic nitrifying populations. Nevertheless, the extent to which ammonia oxidation continued to exist in this thermophilic community suggested that a major energy gain could be associated with it.

Journal Article↗

PubMed2005

Oxygen-limited autotrophic nitrification-denitrification (OLAND) in a rotating biological contactor treating high-salinity wastewater.

A lab-scale rotating biological contactor (RBC) reactor operated under OLAND conditions was slowly adapted during 178 days to increasing salt concentrations going up to 30 g NaCl L(-1). The reactor performed well during this experimental period. However, the removal capacity of the reactor was lower under high-salinity conditions. A removal efficiency of 84% was achieved at a N loading rate of 725 mg N L(-1) d(-1) and a salt concentration of 30 g L(-1). The effect of salt shock loading and adaptation to 30 g NaCl L(-1) on the specific nitritation and anammox activity of the biomass was investigated in short-term batch experiments. A salt shock loading of 30 g L(-1) caused a 43% decrease in specific nitritation activity and 96% loss of specific anammox activity compared to reference biomass (not exposed to salt). The salt-adapted biomass (3-4 weeks) showed a specific nitritation activity that was 23% lower, and a specific anammox activity that was 58% lower, compared to the reference biomass. Overall, these results demonstrate that the OLAND process can have the potential to treat ammonium-rich brines after adaptation to high salinity.

Biodegradation, Environmental↗

PubMed1990

Catabolic thiosulfate disproportionation and carbon dioxide reduction in strain DCB-1, a reductively dechlorinating anaerobe.

Strain DCB-1 is a strict anaerobe capable of reductive dehalogenation. We elucidated metabolic processes in DCB-1 which may be related to dehalogenation and which further characterize the organism physiologically. Sulfoxy anions and CO2 were used by DCB-1 as catabolic electron acceptors. With suitable electron donors, sulfate and thiosulfate were reduced to sulfide. Sulfate and thiosulfate supported growth with formate or hydrogen as the electron donor and thus are probably respiratory electron acceptors. Other electron donors supporting growth with sulfate were CO, lactate, pyruvate, butyrate, and 3-methoxybenzoate. Thiosulfate also supported growth without an additional electron donor, being disproportionated to sulfide and sulfate. In the absence of other electron acceptors, CO2 reduction to acetate plus cell material was coupled to pyruvate oxidation to acetate plus CO2. Pyruvate could not be fermented without an electron acceptor. Carbon monoxide dehydrogenase activity was found in whole cells, indicating that CO2 reduction probably occurred via the acetyl coenzyme A pathway. Autotrophic growth occurred on H2 plus thiosulfate or sulfate. Diazotrophic growth occurred, and whole cells had nitrogenase activity. On the basis of these physiological characteristics, DCB-1 is a thiosulfate-disproportionating bacterium unlike those previously described.

Acetates↗

PubMed2005

Sulfide removal in wastewater from petrochemical industries by autotrophic denitrification.

An alternative flowchart for the biological removal of hydrogen sulfide from oil-refining wastewater is presented; autotrophic denitrification in a multi-stage treatment plant was utilized. A pilot-scale plant was fed with a mixture of the following constituents: (a) original wastewater from an oil refining industry (b), the effluent of the existing nitrification-stage treatment plant and (c) sulfide in the form of Na2S. Anoxic sulfide to sulfate oxidation, with nitrate as a terminal electron acceptor, proved very successful, as incoming concentrations of 110 mg S2-/L were totally converted to SO(4)2-. At complete denitrification, the concentration of S2- in the reactor effluent was less than 0.1mg/L. Fluctuating S2- concentration in the feed could be tolerated without any problems, as the accumulated sulfide in the effluent of the denitrification stage is oxidized aerobically in a subsequent activated-sludge treatment stage. This alternative new treatment scheme was further introduced at the refinery's wastewater processing plant. Thus, complete H2S removal is now accomplished by the combination of the proposed biological method and the existing stripping with CO2. As a result, stripping, and thus its cost, is reduced by 70%.

Chemical Industry↗

PubMed1998

Ammonium removal by the oxygen-limited autotrophic nitrification-denitrification system

The present lab-scale research reveals the potential of implementation of an oxygen-limited autotrophic nitrification-denitrification (OLAND) system with normal nitrifying sludge as the biocatalyst for the removal of nitrogen from nitrogen-rich wastewater in one step. In a sequential batch reactor, synthetic wastewater containing 1 g of NH4+-N liter-1 and minerals was treated. Oxygen supply to the reactor was double-controlled with a pH controller and a timer. At a volumetric loading rate (Bv) of 0. 13 g of NH4+-N liter-1 day-1, about 22% of the fed NH4+-N was converted to NO2--N or NO3--N, 38% remained as NH4+-N, and the other 40% was removed mainly as N2. The specific removal rate of nitrogen was on the order of 50 mg of N liter-1 day-1, corresponding to 16 mg of N g of volatile suspended solids-1 day-1. The microorganisms which catalyzed the OLAND process are assumed to be normal nitrifiers dominated by ammonium oxidizers. The loss of nitrogen in the OLAND system is presumed to occur via the oxidation of NH4+ to N2 with NO2- as the electron acceptor. Hydroxylamine stimulated the removal of NH4+ and NO2-. Hydroxylamine oxidoreductase (HAO) or an HAO-related enzyme might be responsible for the loss of nitrogen.

Journal Article↗

PubMed1997

Acetogenic bacteria: what are the in situ consequences of their diverse metabolic versatilities?

The four decades of the now classic studies by Harland G. Wood and Lars G. Ljungdahl lead to the resolution of the autotrophic acetyl-CoA 'Wood/Ljungdahl' pathway of acetogenesis. This pathway is the hallmark of acetogens, but is also used by other bacteria, including methanogens and sulfate-reducing bacteria, for both catabolic and anabolic purposes. Thus, the pathway is wide spread in nature and plays an important role in the global turnover of carbon. Because most historical studies with acetogens focused on the biochemistry of the acetyl-CoA pathway, the metabolic diversity and ecology of acetogens remained largely unexplored for many years. Although acetogens were initially conceived to be a somewhat obscure bacteriological group with limited metabolic capabilities, it is now clear that acctogens are arguably the most metabolically diverse group of obligate anaerobes characterized to date. Their anaerobic metabolic arsenal includes the capacity to oxidize diverse substrates, including aromatic, C1, C2, and halogenated compounds, and engage a large number of alternative energy-conserving, terminal electron-accepting processes, including classic fermentations and the dissimilation of inorganic nitrogen. In this regard, one might consider acetogens on a collective basis as the pseudomonads of obligate anaerobes. By virtue of their diverse metabolic talents, acetogens can be found in essentially all habitats. This review evaluates the metabolic versatilities of acetogens relative to both the engagement (regulation) of the acetyl-CoA pathway and the ecological roles likely played by this bacteriogical group.

Acetic Acid↗

PubMed2001

Bacterially mediated precipitation in marine stromatolites.

Stromatolites are laminated, lithified (CaCO3) sedimentary deposits formed by precipitation and/or sediment accretion by cyanobacterial-bacterial mat communities. Stromatolites have been associated with these communities as far back as the Precambrian era some 2+ billion years ago. The means by which microbial communities mediate the precipitation processes have remained unclear, and are the subject of considerable debate and speculation. Two alternative explanations for microbially mediated precipitation include: (i) cyanobacterial photosynthesis increases pH in a system supersaturated in respect of CaCO3, resulting in CaCO3 precipitation and then laminated lithification, and (ii) decomposition of cyanobacterial extracellular organic matter (e.g. sheaths, mucilage and organic acids) by microheterotrophs leads to release of organic-bound Ca2+ ions and CaCO3 precipitation. We evaluated these explanations by examining metabolically active, lithifying stromatolitic mat communities from Highborne Cay, Bahamas, using microautoradiography. Microautoradiographic detection of 14CO2 fixation and 3H organic matter (D-glucose and an amino acid mixture) utilization by photosynthetically active cyanobacteria and microheterotrophs, combined with community-level uptake experiments, indicate that bacteria, rather than cyanobacteria are the dominant sites of CaCO3 deposition. In the oligotrophic waters in which stromatolites exist, microheterotrophs are reliant on the photosynthetic community as a main source of organic matter. Therefore, autotrophic production indirectly controls microbially mediated precipitation and stromatolite formation in these shallow marine environments.

Bacteria↗

PubMed2000

Origin and evolution of the mitochondrial proteome.

The endosymbiotic theory for the origin of mitochondria requires substantial modification. The three identifiable ancestral sources to the proteome of mitochondria are proteins descended from the ancestral alpha-proteobacteria symbiont, proteins with no homology to bacterial orthologs, and diverse proteins with bacterial affinities not derived from alpha-proteobacteria. Random mutations in the form of deletions large and small seem to have eliminated nonessential genes from the endosymbiont-mitochondrial genome lineages. This process, together with the transfer of genes from the endosymbiont-mitochondrial genome to nuclei, has led to a marked reduction in the size of mitochondrial genomes. All proteins of bacterial descent that are encoded by nuclear genes were probably transferred by the same mechanism, involving the disintegration of mitochondria or bacteria by the intracellular membranous vacuoles of cells to release nucleic acid fragments that transform the nuclear genome. This ongoing process has intermittently introduced bacterial genes to nuclear genomes. The genomes of the last common ancestor of all organisms, in particular of mitochondria, encoded cytochrome oxidase homologues. There are no phylogenetic indications either in the mitochondrial proteome or in the nuclear genomes that the initial or subsequent function of the ancestor to the mitochondria was anaerobic. In contrast, there are indications that relatively advanced eukaryotes adapted to anaerobiosis by dismantling their mitochondria and refitting them as hydrogenosomes. Accordingly, a continuous history of aerobic respiration seems to have been the fate of most mitochondrial lineages. The initial phases of this history may have involved aerobic respiration by the symbiont functioning as a scavenger of toxic oxygen. The transition to mitochondria capable of active ATP export to the host cell seems to have required recruitment of eukaryotic ATP transport proteins from the nucleus. The identity of the ancestral host of the alpha-proteobacterial endosymbiont is unclear, but there is no indication that it was an autotroph. There are no indications of a specific alpha-proteobacterial origin to genes for glycolysis. In the absence of data to the contrary, it is assumed that the ancestral host cell was a heterotroph.

Alphaproteobacteria↗

PubMed2001

Correlations of structure and electronic properties from EPR spectroscopy of hydroxylamine oxidoreductase.

Hydroxylamine oxidoreductase (HAO) from the autotrophic nitrifying bacterium Nitrosomonas europaea catalyzes the oxidation of NH(2)OH to HNO(2). The enzyme contains eight hemes per subunit which participate in catalytic function and electron transport. The structure of the enzyme shows a unique spatial arrangement of the eight hemes, subsets of which are now observed in four other proteins. The spatial arrangement displays three types of diheme pairing motifs. At least four of the eight hemes are electronically coupled in two distinguishable pairs and one of these pairs is at the active site of the enzyme. Here, the use of quantitative simulation of the EPR signals allows determination of exchange couplings, and assignments of signals and reduction potentials to hemes of the crystal structure. The absence of any obvious heme-to-heme bonding pathway in the crystal structure suggests that the observed exchange interactions are derived from direct electronic overlap of porphyrin orbitals. This provides evidence for heme pairs which function as biological two-electron redox centers in electron-transfer processes.

Catalysis↗

PubMed1999

[Stable oxygen and carbon isotopes in biological studies].

Biogenic chemical elements in the Earth biosphere are presented both by light and heavy stable isotopes (16O and 18O, 12C and 13C). Because of inequality of these isotopes the light ones dominate in the exchange processes between the animate and inanimate nature and this leads to changes in the ratios of isotope modifications in the environment. A comparatively constant isotopic composition of the Earth atmosphere is primarily maintained by water. It is the heavy carbon isotope that inputs to the most isotope-heavy compounds such as marine carbonates within the atmosphere--hydrosphere system. As in nature, biogenic isotopes fractionate inside hermetically sealed habitats with the regenerative life-support systems; however, the mechanism of relative stability of the isotope composition is unknown. The problem of providing the best isotopic composition of biogenic chemical elements aboard manned space vehicles was first raised by Yu.Ye.Sinyak and A.I. Grigoriev in 1996. The review contains the data on the levels of oxygen isotopes and photosynthetically generated oxygen in water pools in different regions of the Earth. discussion of the ratios of the oxygen and carbon isotopes in the atmospheric carbon dioxide, and the range of isotopes variations and presumed "sites" of isotopes fractionating in cellular structures of autotrophs. The wealth of literary findings effectuates the conclusion that artificial environments for humans should reproduce the natural relationships and variations of biogenic isotopes. Yet, what biogenic isotopes ratios are desirable aboard manned space vehicles can be determined in extensive investigations of the effects of various modifications of stable isotopes on humans with due account for the unfavourable factors of space flight.

Biology↗

PubMed2005

A novel membrane bioreactor enhanced by effective microorganisms for the treatment of domestic wastewater.

The activated sludge membrane bioreactor (MBR) has been shown to have some advantages for the processing and reclamation of domestic wastewater. We hypothesized that certain microorganisms, chosen for their abilities to decompose the chemical components of raw sewage, would, when coupled with the MBR, significantly improve the stability and efficiency of this system. We selected environmental bacterial strains which oxidize ammonia and nitrites and produce protease, amylase, and cellulase for the development and testing of a novel biologically enhanced MBR (eMBR). We compared the eMBR with the activated sludge MBR. With the eMBR, the average values of effluent quality were: chemical oxygen demand (COD), 40 mg/l(average efficiency of removal 90.0%); and NH(4) (+)-N, 0.66 mg/l(average efficiency of removal 99.4%). Effluent qualities met the standard and were stable during the entire 90 days of this study. For the activated sludge MBR, the COD removal rate was 91.7%, and the NH(4) (+)-N removal (94.8%) was less than that of the eMBR. Start-up time for the eMBR was only 24-48 h, much shorter than the 7-8 days required to initiate function of the standard MBR. The biomass concentrations of total heterotrophic bacteria and autotrophic bacteria in the eMBR did not fluctuate significantly during the course of the study. Various kinds of microorganisms will establish an ecological balance in the reactor. Compared with the activated sludge MBR, the eMBR not only produced an excellent and stable quality of effluent but also resulted in a shorter time to start-up and significantly improved the efficiency of NH(4) (+)-N removal.

Bacteria↗

PubMed2002

Characterization of an autotrophic sulfide-oxidizing marine Arcobacter sp. that produces filamentous sulfur.

A coastal marine sulfide-oxidizing autotrophic bacterium produces hydrophilic filamentous sulfur as a novel metabolic end product. Phylogenetic analysis placed the organism in the genus Arcobacter in the epsilon subdivision of the Proteobacteria. This motile vibrioid organism can be considered difficult to grow, preferring to grow under microaerophilic conditions in flowing systems in which a sulfide-oxygen gradient has been established. Purified cell cultures were maintained by using this approach. Essentially all 4',6-diamidino-2-phenylindole dihydrochloride-stained cells in a flowing reactor system hybridized with Arcobacter-specific probes as well as with a probe specific for the sequence obtained from reactor-grown cells. The proposed provisional name for the coastal isolate is "Candidatus Arcobacter sulfidicus." For cells cultured in a flowing reactor system, the sulfide optimum was higher than and the CO(2) fixation activity was as high as or higher than those reported for other sulfur oxidizers, such as Thiomicrospira spp. Cells associated with filamentous sulfur material demonstrated nitrogen fixation capability. No ribulose 1,5-bisphosphate carboxylase/oxygenase could be detected on the basis of radioisotopic activity or by Western blotting techniques, suggesting an alternative pathway of CO(2) fixation. The process of microbial filamentous sulfur formation has been documented in a number of marine environments where both sulfide and oxygen are available. Filamentous sulfur formation by "Candidatus Arcobacter sulfidicus" or similar strains may be an ecologically important process, contributing significantly to primary production in such environments.

Arcobacter↗

PubMed2005

Significance of instream autotrophs in trophic dynamics of the Upper Mississippi River.

Trophic dynamics of large river-floodplain ecosystems are still not well understood despite development of several conceptual models over the last 25 years. To help resolve questions about the relative contribution of algal and detrital organic matter to food webs in the Upper Mississippi River, we (1) separated living and detrital components of ultrafine and fine transported organic matter (UTOM and FTOM, respectively) by colloidal silica centrifugation; (2) identified stable isotope signatures (delta(13)C and delta(15)N) for these two portions of transported organic matter and other potential organic matter sources; and (3) employed a multiple source, dual-isotope mixing model to determine the relative contribution of major energy sources to primary consumers and the potential contribution of basal sources to the biomass of secondary consumers. The delta(13)C and delta(15)N of living and detrital fractions of UTOM and FTOM were distinct, indicating clear differences in isotopic composition of the algal and detrital fractions of transported organic matter. Living and detrital transported organic matter also differed from other potential organic matter sources by either delta(13)C or delta(15)N. A six-source mixing model using both delta(13)C and delta(15)N indicated that algal transported organic matter was the major resource assimilated by primary consumers. The contribution of detrital transported organic matter was small in most cases, but there were a small number of taxa for which it could potentially contribute to more than half the assimilated diet. Colloidal dissolved organic matter, which includes heterotrophic bacteria, accounted for only a small fraction of the organic matter assimilated by most primary consumers, indicating that coupling between microbial processes and metazoan production is minimal. Terrestrial C(3) litter from the floodplain forest floor and aquatic macrophytes were also relatively unimportant to the assimilated diet of primary consumers. Application of the mixing model to compare basal source isotopic ratios to secondary consumers revealed that most organic matter moving from primary to secondary consumers originated from algal TOM. Our findings indicate that autochthonous organic matter is the major energy source supporting metazoan production in the main channel of this large river, at least during the summer. This study joins a number of other investigations performed globally that indicate organic matter originating from instream production of sestonic and benthic microalgae is a major driver in the trophic dynamics of large river ecosystems.

Animals↗