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Social ecosystem health: confronting the complexity and emergence of infectious diseases.

The emergence and re-emergence of infectious diseases and their rapid dissemination worldwide are challenging national health systems, particularly in developing countries affected by extreme poverty and environmental degradation. The expectations that new vaccines and drugs and global surveillance would help reverse these trends have been frustrated thus far by the complexity of the epidemiological transition, despite promising prospects for the near future in biomolecular research and genetic engineering. This impasse raises crucial issues concerning conceptual frameworks supporting priority-setting, risk anticipation, and the transfer of science and technology's results to society. This article discusses these issues and the limitations of social and economic sciences on the one hand and ecology on the other as the main theoretical references of the health sciences in confronting the complexity of these issues on their own. The tension between these historically dissociated paradigms is discussed and a transdisciplinary approach is proposed, that of social ecosystem health, incorporating these distinct perspectives into a comprehensive framework.

Communicable Diseases, Emerging↗

PubMed2006

Transgenics and vertebrate cloning as tools for species conservation.

It has been suggested that transgenics and vertebrate cloning have a role to play in conservation. Now is the time to evaluate their risks and benefits, before these technologies are widely implemented in our field. Direct risks of transgenics include escape and introgression of transgenes into wild populations; weedy invasion by transgenic organisms; toxicity or pathogenicity of engineered organisms and their products; and human error in the field testing and tracking of transgenic organisms. Indirect risks include environmental effects of increased herbicide use; the danger that engineered organisms may aid the development of bioweapons; the likelihood that gene patenting will lead to the privatization of natural resources; and the diversion of support from less glamorous forms of conservation. Formal risk assessments are commonly used to evaluate transgenic procedures, but our incomplete understanding of both ecosystem processes and the action of transgenes renders most of these assessments scientifically and socially unjustified. Nevertheless, a few, low-risk applications of transgenics may be possible: for example, "super-sterile" ornamental cultivars. Vertebrate cloning poses little risk to the environment, but it can consume scarce conservation resources, and its chances of success in preserving species seem poor To date, the conservation benefits of transgenics and vertebrate cloning remain entirely theoretical, but many of the risks are known and documented. Conservation biologists should devote their research and energies to the established methods of conservation, none of which require transgenics or vertebrate cloning.

Animals↗

PubMed2006

Terpene synthases and the regulation, diversity and biological roles of terpene metabolism.

Terpene synthases are the primary enzymes in the formation of low-molecular-weight terpene metabolites. Rapid progress in the biochemical and molecular analysis of terpene synthases has allowed significant investigations of their evolution, structural and mechanistic properties, and regulation. The organization of terpene synthases in large gene families, their characteristic ability to form multiple products, and their spatial and temporal regulation during development and in response to biotic and abiotic factors contribute to the time-variable formation of a diverse group of terpene metabolites. The structural diversity and complexity of terpenes generates an enormous potential for mediating plant-environment interactions. Engineering the activities of terpene synthases provides opportunities for detailed functional evaluations of terpene metabolites in planta.

Alkyl and Aryl Transferases↗

PubMed2002

Experience with environmental issues in GM crop production and the likely future scenarios.

In the Cartagena Protocol on Biosafety, standards for risk assessment of genetically modified organisms (GMOs) have been set. The criteria and information basis for the risk assessment of GMOs have been modified by the EU Directive 2001/18/EC. Various approaches to further improve the criteria for environmental risk assessment of GMOs are described in this study. Reports on the ecological impacts of the cultivation of certain non-transgenic crop plants with novel or improved traits as analogy models to transgenic plants showed that the effects of agricultural practice can be at least equally important as the effects of gene transfer and invasiveness, although the latter currently play a major role in risk assessment of transgenic crops. Based on these results the applicability of the methodology of 'Life Cycle Analysis (LCA)' for genetically modified plants in comparison with conventionally bred and organically grown crop plants was evaluated. The methodology was regarded as applicable with some necessary future improvements. In current projects, the assessment of toxicology and allergenicity of GM crops are analysed, and suggestions for standardization are developed. Based on results and recommendations from these efforts there are still the challenges of how to operationalize the precautionary principle and how to take into account ecologically sensitive ecosystems, including centres of origin and centres of genetic diversity.

Agriculture↗

PubMed2005

Quantitative molecular assay for fingerprinting microbial communities of wastewater and estrogen-degrading consortia.

A quantitative fingerprinting method, called the real-time terminal restriction fragment length polymorphism (real-time-t-RFLP) assay, was developed for simultaneous determination of microbial diversity and abundance within a complex community. The real-time-t-RFLP assay was developed by incorporating the quantitative feature of real-time PCR and the fingerprinting feature of t-RFLP analysis. The assay was validated by using a model microbial community containing three pure strains, an Escherichia coli strain (gram negative), a Pseudomonas fluorescens strain (gram negative), and a Bacillus thuringiensis strain (gram positive). Subsequently, the real-time-t-RFLP assay was applied to and proven to be useful for environmental samples; the richness and abundance of species in microbial communities (expressed as the number of 16S rRNA gene copies of each ribotype per milliliter) of wastewater and estrogen-degrading consortia (enriched with 17alpha-estradiol, 17beta-estradiol, or estrone) were successfully characterized. The results of this study strongly suggested that the real-time-t-RFLP assay can be a powerful molecular tool for gaining insight into microbial communities in various engineered systems and natural habitats.

Bacillus thuringiensis↗

PubMed1996

A stringently controlled expression system for analysing lateral gene transfer between bacteria.

The lateral transfer of genetic information among microorganisms is a major force driving the outstanding adaptability of microbial communities to environmental changes. Until now little information has been obtained on gene transfer in natural ecosystems. We present here a genetic circuit for detecting and quantifying horizontal gene transfer from a defined donor microorganism to recipient organisms in the absence of selection for a recipient-specific phenotype. The system consists of an engineered lacZ (encoding beta-galactosidase) reporter gene whose expression is controlled by a synthetic regulatory element based on a fusion between the Pr promoter-operator from lambda bacteriophage and the 5' non-coding leader region of the inp gene encoding the IS 10 transposase function. Expression of this reporter cassette in the recombinant microorganism is completely shut down by two chromosomally encoded trans-acting repressors working at the level of transcription (the Cl-EK117 protein from the lambda phage), and at the level of translation (the antisense RNA-OUT of the IS 10 element). When the reporter element is transferred to a different host by any mechanism, it escapes repression and becomes expressed. The system was validated with Pseudo-monas putida, and conjugational transfer frequencies of the reporter element as low as 10(-6) were detected. The modular design and broad host range of the genetic circuit, in combination with biomarkers which permit real-time in situ detection, will facilitate the monitor-ing of gene flow in a non-disruptive manner within the environment.

Bacteria↗

PubMed2004

Growth of Phragmites australis (Cav.) Trin ex. Steudel in mine water treatment wetlands: effects of metal and nutrient uptake.

The abandoned mine of Shilbottle Colliery, Northumberland, UK is an example of acidic spoil heap discharge that contains elevated levels of many metals. Aerobic wetlands planted with the common reed, Phragmites australis, were constructed at the site to treat surface runoff from the spoil heap. The presence of a perched water table within the spoil heap resulted in the lower wetlands receiving acidic metal contaminated water from within the spoil heap while the upper wetland receives alkaline, uncontaminated surface runoff from the revegetated spoil. This unique situation enabled the comparison of metal uptake and growth of plants used in treatment schemes in two cognate wetlands. Results indicated a significant difference in plant growth between the two wetlands in terms of shoot height and seed production. Analyses of metal and nutrient concentrations within plant tissues provided the basis for three hypotheses to explain these differences: (i) the toxic effects of high levels of metals in shoot tissues, (ii) the inhibition of Ca (an essential nutrient) uptake by the presence of metals and H+ ions, and (iii) low concentrations of bioavailable nitrogen sources resulting in nitrogen deficiency. This has important implications for the engineering of constructed wetlands in terms of the potential success of plant establishment and vegetation development.

Aluminum↗

PubMed2004

Permafrost and infrastructure in the usa Basin (Northeast European Russia): possible impacts of global warming.

The relationship between permafrost conditions and the distribution of infrastructure in the Usa Basin, Northeast European Russia, is analyzed. About 75% of the Basin is underlain by permafrost terrain with various degrees of continuity (isolated patches to continuous permafrost). The region has a high level of urban and industrial development (e.g., towns, coal mines, hydrocarbon extraction sites, railway, pipelines). GIS-analyses indicate that about 60% of all infrastructure is located in the 'high risk' permafrost area, here defined as the zones of isolated to discontinuous permafrost (3-90% coverage) with 'warm' ground temperatures (0 to -2 degrees C). Ground monitoring, aerial photo interpretation, and permafrost modeling suggest a differential response to future global warming. Most of the permafrost-affected terrain will likely start to thaw within a few decades to a century. This forecast poses serious challenges to permafrost engineering and calls for long-term investments in adequate infrastructure that will pay back overtime.

Ecosystem↗

PubMed2005

[Ecological characteristics of phytoplankton in Suining tributary under bio-remediation].

Based on the analyses of phytoplankton community in the treated and untreated reaches of Suining tributary of Suzhou River, this paper studied the effects of bio-remediation on phytoplankton. As the result of the remediation, the density and Chl-a content of phytoplankton in treated reach were greatly declined, while the species number and Shannon-Wiener diversity index ascended obviously. The percentage of Chlorophyta and Baeillariophyta ascended, and some species indicating medium-and oligo-pollution were found. All of these illustrated that bio-remediation engineering might significantly benefit to the improvement of phytoplankton community structure and water quality.

Biodegradation, Environmental↗

PubMed2005

[Ecological protection and sustainable utilization of Erhai Lake, Yunnan].

Economic development and increase of population pressure have caused a series of ecological environmental problems of Erhai Lake. These problems include: (1) Quickening of eutrophication process, (2) Decrease of water level and water resources, (3) Habitat deterioration of lakeside zone, and (4) Overfishing and slow depletion of aboriginal fish. Pollutant loading of Erhai Lake is as follows: COD(Cr) 3 008 t x a(-1), TP 137.31 t x a(-1), TN 1 426.35 t x a(-1). According to the mestrophic target of water quality, loading of nitrogen and phosphorus is far above environmental capacity of Erhai Lake. Erhai Lake is now in a pivotal and hypersensitive period of trophic states change, and the position is very critical. Therefore, some countermeasures to solve the problems are presented as follows: (1) Defining the dominant functions of Erhai Lake, (2) Paying attention to the adjustment of the industrial structure and distribution in the course of urbanization, (3) Setting up lakeside zone reserve, (4) Strengthening the control of tourism pollution, (5) Properly adjusting the water level of Erhai Lake, and (6) Some ecological engineering measures for water resources protection in the basin should be taken through collecting and treating of urban sewages, ecological rehabilitating of the main inflowing rivers, constructing of ecological agricultures and improving of rural environment, ecological restoring of aquatic ecosystem, and soil and water conservation.

China↗

PubMed2004

Strategies for bioremediation of polychlorinated biphenyls.

Polychlorinated biphenyls (PCBs) are serious environmental pollutants that threaten both the natural ecosystem and human health. For remediation of environments contaminated with PCBs, several approaches that exploit the potential of microbes to degrade PCBs have been developed. These approaches include improvement of PCB solubilization and entry into the cell, pathway and enzyme engineering, and control of enzyme expression. In this mini-review, we briefly summarize these strategies and provide potentially useful knowledge for the further improvement of the bacterial breakdown of PCBs.

Bacteria↗

PubMed2001

Methyl tert-butyl ether (MTBE) degradation by a microbial consortium.

The widespread use of methyl tert-butyl ether (MTBE) as a gasoline additive has resulted in a large number of cases of groundwater contamination. Bioremediation is often proposed as the most promising alternative after treatment. However, MTBE biodegradation appears to be quite different from the biodegradation of usual gasoline contaminants such as benzene, toluene, ethyl benzene and xylene (BTEX). In the present paper, the characteristics of a consortium degrading MTBE in liquid cultures are presented and discussed. MTBE degradation rate was fast and followed zero order kinetics when added at 100 mg l(-1). The residual MTBE concentration in batch degradation experiments ranged from below the detection limit (1 microg l(-1)) to 50 microg l(-1). The specific activity of the consortium ranged from 7 to 52 mgMTBE g(dw)(-1) h(-1) (i.e. 19-141 mgCOD g(dw) (-1) h(-1)). Radioisotope experiments showed that 79% of the carbon-MTBE was converted to carbon-carbon dioxide. The consortium was also capable of degrading a variety of hydrocarbons, including tert-butyl alcohol (TBA), tert-amyl methyl ether (TAME) and gasoline constituents such as benzene, toluene, ethylbenzene and xylene (BTEX). The consortium was also characterized by a very slow growth rate (0.1 d(-1)), a low overall biomass yield (0.11 gdw g(-1)MTBE; i.e. 0.040 gdw gCOD(-1)), a high affinity for MTBE and a low affinity for oxygen, which may be a reason for the slow or absence of MTBE biodegradation in situ. Still, the results presented here show promising perspectives for engineering the in situ bioremediation of MTBE.

Bacteria↗

PubMed1956

Bilharziasis survey in British Somaliland, Eritrea, Ethiopia, Somalia, the Sudan, and Yemen.

A survey of bilharziasis and its vectors in certain countries of north-east Africa and of the Red Sea area, carried out between December 1951 and February 1952, is described within the framework of a review of the somewhat scattered and incomplete information already available on this subject in the literature. Clinical inquiry and microscopic examination of random stool and urine specimens were used to obtain data on the endemicity of the disease, and many samples of suspect mollusc vectors of Schistosoma haematobium and S. mansoni were collected from varied habitats and subsequently classified. A section on malacology discusses the difficulties of systematization of the African freshwater snails. The need for a fuller investigation of human incidence, particularly in the inland and highland districts, is stressed, and the author suggests measures for the control of vectors, sanitation of water channels, prophylaxis of the disease, health education and legislation, and biological and chemical research. He draws the conclusion that the future economy of these countries depends upon the joint efforts of the physician, the malacologist, the chemist, and the engineer in controlling the spread of bilharziasis from the highly endemic areas to regions where its incidence is still slight.

Africa, Eastern↗

PubMed1996

Possible Culex pipiens pallens control by improvement of flow rates in water channels of Saga City, southwest Japan.

Water levels and flow rates (no. censuses with flow/no. censuses per year) were analyzed for 208 mosquito-productive and 422 mosquito-free channel segments during 1986-88 in Saga City, southwest Japan. Mean water levels tended to be higher at mosquito-free segments than at mosquito-productive segments, but the differences were < 5 cm and usually not significant. Flow rates exceeded 80% at 60-67% of mosquito-free segments. In contrast, flow rates were < 20% at 49-62% of mosquito-productive segments. Expected flow speeds at cement-lined segments exceeded 20 cm/sec (a flow speed required for mosquito control) for water levels of > 15 cm. Most mosquito-productive segments had mean water levels of > 15 cm, indicating that water stagnancy at those segments was due not to low water levels but to their structure. Engineering is necessary to yield flow speeds high enough to prevent mosquito breeding at mosquito-productive segments. Alternatively, engineering to prevent wastewater discharge into open channels may improve water quality, leading to mosquito suppression through colonization of larvivorous predators.

Animals↗

PubMed1994

[Systematic concept and development model for the production base of Gynostemma pentaphyllum (Thunb.) Madino].

Based on the theories and methods of systematic engineering, the economic, ecological and social benefits of the whole set of regenerating techniques for Gynostemma pentaphyllum are evaluated comprehensively under the consideration of modern agroforestry and stereoscopic agriculture. As a result of the evaluation an optimal model of artificial complex ecosystem circulation for the agricultural-forestry-medicinal materials in the production base of Gynostemma pentaphyllum is selected.

Cost-Benefit Analysis↗

PubMed1993

Sustainable agriculture and integrated pest management in China.

In developed countries, emphasis is being switched from high productivity through the use of high inputs to ecologically sustainable agriculture. In developing countries such as China priority must be given to increasing food production while simultaneously trying to optimize sustainability. Achievements in plant protection are being countered by continued evolution of the pest ecosystem, in part driven by application of pesticides or the introduction of new crop varieties. Future management of the agricultural ecosystem requires the development of a method of 'super-long-term' prediction to evaluate possible consequences of different strategies of plant protection. Crop plants with durable resistance to pests must be derived by conventional breeding or by using biotechnology and genetic engineering. Genetic vulnerability can also be reduced by techniques such as gene rotation and mixed cropping. Biological control of plant pests shows promise but requires ecological study of the relationships among crop, pest and natural enemy. Implementation of sustainable pest management will need training and education of farmers, extension workers and policy makers to deliver new information in the developing countries.

Agriculture↗

PubMed2001

Development of river ecosystem models for Flemish watercourses: case studies in the Zwalm river basin.

Only recently, modelling has been accepted as an interesting and powerful tool to support river quality assessment and management. The 'River Invertebrate Prediction and Classification System' (RIVPACS), based on statistical modelling, was one of the first and best known systems in this context. RIVPACS was developed to classify macroinvertebrate community types and to predict the fauna expected to occur in different types of watercourses, based on a small number of environmental variables. The prediction is essentially a static 'target' of the fauna to be expected at a site with stated environmental features, in the absence of environmental stress. Therefore this system is rather limited to apply in river assessment and management. Models that offer a prediction of faunal responses to changes in environmental features (e.g. changes in discharge regime, dissolved oxygen level, ...) would be of considerable value for river management. In this context, models based on classification trees, artificial neural networks and fuzzy logic were developed and applied to predict macro-invertebrate communities in the Zwalm river basin located in Flanders, Belgium. Structural characteristics (meandering, substrate type, flow velocity, ...) and physical-chemical variables (dissolved oxygen, pH, ...) were used as inputs to predict the presence or absence of macroinvertebrate taxa in the headwaters and brooks of the Zwalm river basin. In total, data from 60 measurement sites were available. Reliability and particular strengths and weaknesses of these techniques were compared and evaluated. Classification trees performed in general well to predict the absence or presence of the different macroinvertebrate taxa and allowed also to deduct general relations from the dataset. Models based on artificial neural networks (ANNS) were also good in predicting the macroinvertebrate communities at the different sites. Sensitivity analyses related to ANNs allowed to study the impact of the input variables on the presence or absence of macroinvertebrate taxa and to determine the major variables that affect the ecosystem quality and should be taken under direct consideration in the management of river basins. Performance of the fuzzy logic models was significantly related to the methods that were used to set up the membership functions and the reliability of the information that was available. Fuzzy logic did not perform as well as the other two techniques with regard to short term predictions. Fuzzy logic appeared to be better and more robust for long term predictions, because of the easy and pragmatic integration of general expert knowledge and data derived rules in the transparent inference engine. The overall conclusion of our study is that all three techniques, classification trees, artificial neural networks and fuzzy logic appeared to be reliable to predict macroinvertebrate communities in polluted streams.

Animals↗

PubMed2006

Spatial effects favour the evolution of niche construction.

We present an individual-based, spatial implementation of an existing two-locus population genetic model of niche construction. Our analysis reveals that, across a broad range of conditions, niche-construction traits can drive themselves to fixation by simultaneously generating selection that favours 'recipient' trait alleles and linkage disequilibrium between niche-construction and recipient trait alleles. The effect of spatiality is key, since it is the local, resource-mediated interaction between recipient and niche-constructing loci which gives rise to gene linkage. Spatial clustering effects point to a possible mechanism by which an initially rare recipient trait whose selection depends on niche construction could establish in an otherwise hostile environment. The same mechanism could also lead to the spread of an established niche-constructing colony. Similar phenomena are observed in the spatial modelling of two species 'engineering webs'. Here, the activities of two niche-constructing species can combine to drive a particular recipient trait to fixation, or in certain circumstances, maintain the presence of polymorphisms through the preservation of otherwise deleterious alleles. This may have some relevance to ecosystem stability and the maintenance of genetic variation, where the frequencies of key resources are affected by the niche-constructing activities of more than one species. Our model suggests that the stability of multi-species webs in natural populations may increase as the complexity of species-environment interactions increases.

Biological Evolution↗