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At least 307 records · Page 17Linked to original sources

PubMed2006

Psychophysical evaluation of calibration curve for diagnostic LCD monitor.

PURPOSE: In 1998, Digital Imaging Communications in Medicine (DICOM) proposed a calibration tool, the grayscale standard display function (GSDF), to obtain output consistency of radiographs. To our knowledge, there have been no previous reports of investigating the relation between perceptual linearity and detectability on a calibration curve. MATERIALS AND METHODS: To determine a suitable calibration curve for diagnostic liquid crystal display (LCD) monitors, the GSDF and Commission Internationale de l'Eclairage (CIE) curves were compared using psychophysical gradient delta and receiver operating characteristic (ROC) analysis for clinical images. RESULTS: We succeeded in expressing visually recognized contrast directly using delta instead of the just noticeable difference (JND) index of the DICOM standard. As a result, we found that the visually recognized contrast at low luminance areas on the LCD monitor calibrated by the CIE curve is higher than that calibrated by the GSDF curve. On the ROC analysis, there was no significant difference in tumor detectability between GSDF and CIE curves for clinical thoracic images. However, the area parameter Az of the CIE curve is superior to that of the GSDF curve. The detectability of tumor shadows in the thoracic region on clinical images using the CIE curve was superior to that using the GSDF curve owing to the high absolute value of delta in the low luminance range. CONCLUSION: We conclude that the CIE curve is the most suitable tool for calibrating diagnostic LCD monitors, rather than the GSDF curve.

Calibration↗

PubMed1993

Use of radial density plots to calibrate image magnification for frozen-hydrated specimens.

Accurate magnification calibration for transmission electron microscopy is best achieved with the use of appropriate standards and an objective calibration technique. We have developed a reliable method for calibrating the magnification of images from frozen-hydrated specimens. Invariant features in radial density plots of a standard are compared with the corresponding features in a "defocused" X-ray model of the same standard. Defocused X-ray models were generated to mimic the conditions of cryo-electron microscopy. The technique is demonstrated with polyoma virus, which was used as an internal standard to calibrate micrographs of bovine papilloma virus type 1 and bacteriophage phi X174. Calibrations of the micrographs were estimated to be accurate to 0.35%-0.5%. Accurate scaling of a three-dimensional structure allows additional calibrations to be made with radial density plots computed from two- or three-dimensional data.

Bacteriophages↗

PubMed1994

Sound calibration and distortion product otoacoustic emissions at high frequencies.

Distortion product otoacoustic emissions offer the potential for assessing inner ear function at high frequencies. However, commonly employed methods for calibrating the acoustic system used in these studies can lead to errors of +/- 20 dB or more in the estimate of eardrum sound pressure levels above 2-3 kHz [Siegel, J. Acoust. Soc. Am. 95, 2589-2597 (1994)]. We assessed the magnitude of these errors by measuring the distortion product emission 2f1-f2 (f1 < f2) in human subjects using either of two microphone locations to calibrate the stimulus. Either the emission probe microphone itself or a probe tube positioned near the eardrum were used in calibrations. The emissions collected with f1 in the vicinity of 5-7 kHz showed a pronounced peak in level relative to other stimulus frequencies when the emission probe was used for calibration. The peak at 5-7 kHz disappeared when the probe tube near the eardrum was used for calibration. The discrepancy in emission levels between the two calibration procedures was as large as 20 dB. The difference is attributed to the presence of standing waves in the ear canal. The systematic errors in estimating eardrum sound pressure level using the emission probe microphone undoubtedly contribute to the variability of emission measurements for high-frequency stimuli.

Acoustic Stimulation↗

PubMed2005

Calibrating Borg scale ratings of hand force exertion.

A study was conducted to assess the efficacy of calibrating subjective worker ratings of hand exertions to reduce error in estimates of applied force. Twenty volunteer subjects applied pinch and power grip forces corresponding to their perceptions of different Borg CR-10 scale levels using both "grip-to-scale" and "guided-grip" procedures. These data were used separately to define relationships between scale ratings and actual force application. Two gripping tasks were performed and corresponding subjective hand force ratings were calibrated using the grip-to-scale calibration data. Results showed that the mean estimation error for a 44.5 N (10 lb) power grip task was significantly reduced from 142.8 (+/-69.0) to 62.3 (+/-58.3) N. The guided-grip calibration method also significantly reduced rating error for the power grip task, however the estimates were biased toward zero. Neither calibration procedure improved rating accuracy of an 8.9 N (2 lb) pinch grip task. The study results indicate that calibration of hand force ratings using the grip-to-scale procedure may improve the accuracy of hand exertion measurements using the Borg CR-10 scale.

Adult↗

PubMed2006

Kr-81m calibration factor for the npl ionisation chamber.

A general method has been developed for the measurement of the activity concentration of 81mKr gas. Due to its short half-life, 13.1s, this gas has to be eluted from a 81Rb/81mKr generator. The 81Rb parent has a half-life of about 4.6 h. The calibration was done in two steps: firstly, a gamma-ray spectrometer was calibrated using 51Cr and 139Ce sources, nuclides with gamma-ray energies bracketing that of 81mKr (190.5 keV). The measurement geometry was equivalent to that of the 81mKr measurement; the sources were inserted into two collimated PTFE tubes in front of the gamma-ray detector. Secondly, a calibration factor for the NPL radionuclide calibrator was determined with a specially designed ionisation chamber insert. The 81mKr gas passed in front of the gamma-ray detector in PTFE tubing before and after entering the ionisation chamber. The calibration factor for 81mKr in the radionuclide calibrator with this geometry was independent of the gas flow rate within determined limits. The analytical calculations of the activity determination, uncertainties and measurement criteria are discussed.

Algorithms↗

PubMed2025

Calibration of additional computational tools expands ClinGen recommendation options for variant classification with PP3/BP4 criteria.

PURPOSE: We previously developed an approach to calibrate computational tools for clinical variant classification, updating recommendations for the reliable use of variant impact predictors to provide evidence strength up to Strong. A new generation of tools using distinctive approaches has since been released, and these methods must be independently calibrated for clinical application. METHODS: Using our local posterior probability-based calibration and our established data set of ClinVar pathogenic and benign variants, we determined the strength of evidence provided by 3 new tools (AlphaMissense, ESM1b, and VARITY) and calibrated scores meeting each evidence strength. RESULTS: All 3 tools reached the Strong level of evidence for variant pathogenicity and Moderate for benignity, although sometimes for few variants. Compared with previously recommended tools, these yielded at best only modest improvements in the trade-offs between evidence strength and false-positive predictions. CONCLUSION: At calibrated thresholds, 3 new computational predictors provided evidence for variant pathogenicity at similar strength to the 4 previously recommended predictors (and comparable with functional assays for some variants). This calibration broadens the scope of computational tools for application in clinical variant classification. Their new approaches offer promise for future advancement of the field.

Humans↗

PubMed2005

Calorimetric determination of amorphous content in lactose: a note on the preparation of calibration curves.

Calorimetric methods (isothermal or solution calorimetry) offer the ability to detect amorphous contents to 0.5% (w/w) or better in processed pharmaceuticals and calorimetric data are becoming more widely accepted in regulatory submissions. However, both methods require the construction of calibration curves, prepared using quantitative physical mixtures of entirely amorphous and entirely crystalline material. If the sample under investigation exists in two or more isomers or polymorphs, and the enthalpy of solution (solution calorimetry) or the enthalpy of crystallisation (isothermal calorimetry) are different for the isomers or polymorphs, then it must be ensured that the batch of material used to prepare the calibration samples has the same isomeric or polymorphic composition as the (processed) material to be tested. Here, we demonstrate the problems that may arise using lactose as a pharmaceutically important model substance. Calibration curves were prepared from solution calorimetry and isothermal gas perfusion calorimetry data using two batches of lactose (one predominantly anhydrous alpha-lactose and one predominantly beta-lactose). The calibration curves are shown to be significantly different for the two batches, and it is shown that quantification of the amorphous content of a processed sample of unknown isomeric composition is impossible, unless the calibration curve is prepared from the same batch of material as the processed sample. In addition, some of the other problems inherent in using isothermal gas perfusion calorimetry for amorphous content determination, such as wetting issues and the preparation of calibration standards that mimic processes samples, are discussed.

Calibration↗

PubMed2005

Discrimination and calibration of mortality risk prediction models in interventional cardiology.

OBJECTIVES: Using a local percutaneous coronary intervention (PCI) data repository, we sought to compare the performance of a number of local and well-known mortality models with respect to discrimination and calibration. BACKGROUND: Accurate risk prediction is important for a number of reasons including physician decision support, quality of care assessment, and patient education. Current evidence on the value of applying PCI risk models to individual cases drawn from a different population is controversial. METHODS: Data were collected from January 01, 2002 to September 30, 2004 on 5216 consecutive percutaneous coronary interventions at Brigham and Women's Hospital (Boston, MA). Logistic regression was used to create a local risk model for in-hospital mortality in these procedures, and a number of statistical methods were used to compare the discrimination and calibration of this new and old local risk models, as well as the Northern New England Cooperative Group, New York State (1992 and 1997), University of Michigan consortium, American College of Cardiology-National Cardiovascular Data Registry, and The Cleveland Clinic Foundation risk prediction models. Areas under the ROC (AUC) curves were used to evaluate discrimination, and the Hosmer-Lemeshow (HL) goodness-of-fit test and calibration curves assessed applicability of the models to individual cases. RESULTS: Multivariate risk factors included in the newly constructed local model were: age, prior intervention, diabetes, unstable angina, salvage versus elective procedure, cardiogenic shock, acute myocardial infarction (AMI), and left anterior descending artery intervention. The area under the ROC curve (AUC) was 0.929 (SE=0.017), and the p value for the Hosmer-Lemeshow (HL) goodness-of-fit was 0.473. This indicates good discrimination and calibration. Bootstrap re-sampling indicated AUC stability. Evaluation of the external models showed an AUC range from 0.82 to 0.90 indicating good discrimination across all models, but poor calibration (HL p value < or = 0.0001). CONCLUSIONS: Validation of AUC values across all models suggests that certain risk factors have remained important over the last decade. However, the lack of calibration suggests that small changes in patient populations and data collection methods quickly reduce the accuracy of patient level estimations over time. Possible solutions to this problem involve either recalibration of models using local data or development of new local models.

Angioplasty, Balloon, Coronary↗

PubMed2005

Calibration of EMG to force for knee muscles is applicable with submaximal voluntary contractions.

PURPOSE: In this study, the influence of using submaximal isokinetic contractions about the knee compared to maximal voluntary contractions as input to obtain the calibration of an EMG-force model for knee muscles is investigated. METHODS: Isokinetic knee flexion and extension contractions were performed by healthy subjects at five different velocities and at three contraction levels (100%, 75% and 50% of MVC). Joint angle, angular velocity, joint moment and surface EMG of five knee muscles were recorded. Individual calibration values were calculated according to [C.A.M. Doorenbosch, J. Harlaar, A clinically applicable EMG-force model to quantify active stabilization of the knee after a lesion of the anterior cruciate ligament, Clinical Biomechanics 18 (2003) 142-149] for each contraction level. RESULTS: First, the output of the model, calibrated with the 100% MVC was compared to the actually exerted net knee moment at the dynamometer. Normalized root mean square errors were calculated [A.L. Hof, C.A.N. Pronk, J.A. van Best, Comparison between EMG to force processing and kinetic analysis for the calf muscle moment in walking and stepping, Journal of Biomechanics 20 (1987) 167-187] to compare the estimated moments with the actually exerted moments. Mean RMSD errors ranged from 0.06 to 0.21 for extension and from 0.12 to 0.29 for flexion at the 100% trials. Subsequently, the calibration results of the 50% and 75% MVC calibration procedures were used. A standard signal, representing a random EMG level was used as input in the EMG force model, to compare the three models. Paired samples t-tests between the 100% MVC and the 75% MVC and 50% MVC, respectively, showed no significant differences (p>0.05). CONCLUSION: The application of submaximal contractions of larger than 50% MVC is suitable to calibrate a simple EMG to force model for knee extension and flexion. This means that in clinical practice, the EMG to force model can be applied by patients who cannot exert maximal force.

Adult↗

PubMed2006

Raman spectroscopy of coated pharmaceutical tablets and physical models for multivariate calibration to tablet coating thickness.

Raman spectra of a set of coated pharmaceutical tablets were analyzed for the purpose of calibrating the spectra to tablet coating thickness. Acetaminophen tablets were coated with a hydroxypropylmethylcellulose/polyethylene glycol film coating whose thickness was varied from 0 to 6% weight gain. Coatings were also prepared with two concentrations of TiO2 at several film thicknesses. The resulting spectral data set was analyzed using several different multivariate calibration procedures. The procedures examined in this study included spectral correction followed by target factor analysis, spectral correction with baseline subtraction followed by principal component regression, and first derivative computation followed by principal component regression. The results demonstrate that target factor analysis is a viable method for calibration of Raman spectra to tablet coating thickness. Calibration based on derivative spectra resulted in linear correlation that was equal to that of the results of target factor analysis for coatings without TiO2. However, target factor analysis was found to be superior to other methods when TiO2 was present in the tablet coatings. The effect of sample fluorescence on each of these chemometric methods was also examined. It was found that when photobleaching of fluorescent impurities due to exposure to the Raman excitation source was controlled, the tablet coating thickness could be calibrated to the intensity of the fluorescence signal. The results also demonstrate that for the samples examined here, calibration by target factor analysis is insensitive to variation in fluorescent intensity when the tablet coating emission spectrum is included in the matrix of target vectors.

Acetaminophen↗

PubMed2004

Calibration and validation of 6 DOFs instrumented spatial linkage for biomechanical applications. A practical approach.

A method for both calibration and validation of a 6 DOF electrogoniometer is presented. A 6 Revolute Instrumented Spatial Linkage (6R-ISL) and a three-dimensional digitizer (3DD) were used simultaneously to collect both static and continuous poses of unconstrained or constrained motions. Validation occurred using a calibrated ball-and-socket joint. A parametrical model of the 6R-ISL (i.e. Virtual Goniometer or VG) was designed using a standard multibody system geometry. Two approaches were used to adjust the VG parameters: a parametrical adjustment of the VG linkage geometry, and a functional adjustment of the potentiometer calibration curves (angle-voltage) in a predefined range of motion. After calibration, 6R-ISL accuracy was better than 1 mm and 1 degrees for translation and orientation, respectively. The functional method presented in this paper can be suggested as a practical approach, which allows on-line checking and calibration of 6R-ISL within the specific range of interest of a particular anatomical joint. In addition, improving the potentiometer calibration curves was less time consuming than the parametrical adjustment.

Algorithms↗

PubMed2005

A review of calibration techniques for freehand 3-D ultrasound systems.

Three-dimensional (3-D) ultrasound (US) is an emerging new technology with numerous clinical applications. Ultrasound probe calibration is an obligatory step to build 3-D volumes from 2-D images acquired in a freehand US system. The role of calibration is to find the mathematical transformation that converts the 2-D coordinates of pixels in the US image into 3-D coordinates in the frame of reference of a position sensor attached to the US probe. This article is a comprehensive review of what has been published in the field of US probe calibration for 3-D US. The article covers the topics of tracking technologies, US image acquisition, phantom design, speed of sound issues, feature extraction, least-squares minimization, temporal calibration, calibration evaluation techniques and phantom comparisons. The calibration phantoms and methods have also been classified in tables to give a better overview of the existing methods.

Algorithms↗

PubMed2005

A review of calibration techniques for freehand 3-D ultrasound systems.

Algorithms↗

PubMed2006

Rapid, easy and reliable calibration for freehand 3D ultrasound.

This paper presents improvements to the plane-based technique for calibrating freehand 3D ultrasound systems. The improvements are designed to make it easier for inexperienced users to perform plane-based calibration and to know that they have got a reliable result. In particular, we enable the calibration to be performed using water at room temperature while producing a result that is valid for average soft tissue and we show how it is possible to provide feedback on the reliability of the calibration using a metric based on the curvature of the calibration criterion function. We present comprehensive results showing that these innovations improve the precision of the calibration and offer useful feedback to the user.

Acoustics↗

PubMed1996

Significant reduction of the bias among commercial immunoassays for lipoprotein(a) after use of a uniform calibrator.

Despite the increasing interest in the measurements of lipoprotein(a) (Lp(a) in serum or plasma, at present there is no effective standardization for Lp(a) assays; the main problems to solve are represented either by the lack of a suitable primary standard or by the absence of a reliable and widely available reference method. A first step is hence the uniformity of calibration of different immunoassays. We calibrated three commercial immunoassays for Lp(a) (enzyme linked immunosorbent assay (ELISA), latex-enhanced immunonephelometric assay (LINA), and immunonephelometric assay (INA) with either proprietary standards or purified Lp(a) material obtained with a rapid and simple procedure. Final results of purified Lp(a) calibration were reported in terms of protein Lp(a) mass whereas we were able to quantify the exact protein concentration of our purified lipoprotein. The uniformity of the calibration of the different assays led to a significant improvement of regression slopes (from 1.88 to 0.90 ELISA vs. LINA, from 1.45 to 0.95 ELISA vs. INA and from 1.27 to 0.96 INA vs. LINA) and correlation coefficients (from 0.990 to 0.994 ELISA vs. LINA, from 0.987 to 0.990 ELISA vs. INA and from 0.985 to 0.987 INA vs. LINA). Furthermore, the significant differences among Lp(a) values obtained after calibration with proprietary standards were minimized, becoming non-significant in two out of three cases. In conclusion, we demonstrated that a better agreement of Lp(a) values obtained with different commercial assays could be simply reached by uniformity of calibration and by employing standards with values accurately measured.

Bias↗

PubMed2003

Explicit calibration method and specific device designed for stereoradiography.

The three-dimensional geometry of the human spine is noteworthy information that can be obtained by stereoradiographic methods. These methods are based on the identification of anatomical structures in several views which are obtained by rotation of a patient standing on a turntable. Calibration algorithms for computer vision or photogrammetry are well documented, but they generally yield calibration devices which are cumbersome for the use in clinical stereoradiography. This paper presents a calibration method adapted to a two-view stereoradiography calibration (frontal and lateral incidences) and based on a simplified geometric modeling of the radiological environment. The a priori knowledge yields four calibration equations related to the vertical and horizontal planes of both views, leading to a specific calibration procedure and device. Moreover this device is attached to the stereoradiographic system (directly integrated on the turntable) in order to facilitate clinical applications. A validation was performed on 26 dried lumbar vertebrae in order to evaluate clinical situation. The mean accuracy of the stereoradiographic reconstruction was 1.2mm.

Aged↗

PubMed2000

Validation of urea as an endogenous reference compound for the in vivo calibration of microdialysis probes.

Microdialysis is a widely used experimental technique, which offers the opportunity to measure drug and metabolite concentrations in the interstitial space fluid in animals and humans. However, microdialysis probes need to be calibrated in vivo to obtain a recovery factor, which describes the relative drug transfer across the membrane. Recently, novel time-saving calibration techniques, based on the use of reference compounds, have been developed. In particular, the use of endogenous urea levels has been advocated. In the present study we set out to validate the use of the urea reference technique for microdialysis probe calibration in healthy volunteers, employing glucose and paracetamol as model analytes. Urea calibration was compared with the results of two standard calibration techniques, i.e. the no net flux technique and the retrodialysis technique. For glucose, recovery values, calculated by the urea reference technique differed significantly from those values, which were assessed by the no net flux technique (p < 0.05), whereas for paracetamol recovery values did not differ significantly, albeit a high intramethod variability was observed (CV=66%). As a conclusion, we could not confirm the hypothesis that recovery values calculated by the urea reference technique provide equivalent results compared with standard calibration techniques.

Acetaminophen↗

PubMed2003

Calibration of ultrasonic hydrophone probes up to 100 MHz using time gating frequency analysis and finite amplitude waves.

A number of ultrasound imaging systems employs harmonic imaging to optimize the trade off between resolution and penetration depth and center frequencies as high as 15 MHz are now used in clinical practice. However, currently available measurement tools are not fully adequate to characterize the acoustic output of such nonlinear systems primarily due to the limited knowledge of the frequency responses beyond 20 MHz of the available piezoelectric hydrophone probes. In addition, ultrasound hydrophone probes need to be calibrated to eight times the center frequency of the imaging transducer. Time delay spectrometry (TDS) is capable of providing transduction factor of the probes beyond 20 MHz, however its use is in practice limited to 40 MHz. This paper describes a novel approach termed time gating frequency analysis (TGFA) that provides the transduction factor of the hydrophone probes in the frequency domain and significantly extends the quasi-continuous calibration of the probes up to 60 MHz. The verification of the TGFA data was performed using TDS calibration technique (up to 40 MHz) and a nonlinear calibration method (up to 100 MHz). The nonlinear technique was based on a novel wave propagation model capable of predicting the true pressure-time waveforms at virtually any point in the field. The spatial averaging effects introduced by the finite aperture hydrophones were also accounted for. TGFA calibration results were obtained for different PVDF probes, including needle and membrane designs with nominal diameters from 50 to 500 micro m. The results were compared with discrete calibration data obtained from an independent national laboratory and the overall uncertainty was determined to be +/-1.5 dB in the frequency range 40-60 MHz and less than +/-1 dB below 40 MHz.

Acoustics↗