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PubMed2002

Mössbauer study of the three-coordinate planar Fe(II) thiolate complex [Fe(SR)(3)](-) (R = C(6)H(2)-2,4,6-tBu(3)): model for the trigonal iron sites of the MoFe(7)S(9):homocitrate cofactor of nitrogenase.

The cofactor (M-center) of the MoFe protein of nitrogenase, a MoFe(7)S(9):homocitrate cluster, contains six Fe sites with a (distorted) trigonal sulfido coordination. These sites exhibit unusually small quadrupole splittings, Delta E(Q) approximately 0.7 mm/s, and isomer shifts, delta approximately 0.41 mm/s. Mössbauer and ENDOR studies have provided the magnetic hyperfine tensors of all iron sites in the S = 3/2 state M(N). To assess the intrinsic zero-field splittings and hyperfine parameters of the cofactor sites, we have studied with Mössbauer spectroscopy two salts of the three-coordinated Fe(II) thiolate complex [Fe(SR)(3)](-) (R = C(6)H(2)-2,4,6-tBu(3)). One of the salts, [Ph(4)P][Fe(SR)(3)] x 2MeCN x C(7)H(8), 1, has a planar geometry with idealized C(3h) symmetry. This S = 2 complex has an axial zero-field splitting with D = +10.2 cm(-1). The magnetic hyperfine tensor components A(x) = A(y) = -7.5 MHz and A(z) = -29.5 MHz reflect an orbital ground state with d(z(2)) symmetry. A(iso) = (A(x) +A(y) +A(z))/3 = -14.9 MHz, which includes the contact interaction (kappa P = -21.9 MHz) and an orbital contribution (+7 MHz), which is substantially smaller than A(iso) approximately -22 MHz of the tetrahedral Fe(II)(S-R)(4) sites of both rubredoxin and [PPh(4)](2)[Fe(II)(SPh)(4)]. The largest component of the electric field gradient (EFG) tensor is negative, as expected for a d(z(2)) orbital. However, Delta E(Q) = -0.83 mm/s, which is smaller than expected for a high-spin ferrous site. This reduction can be attributed to a ligand contribution, which in planar complexes provides a large positive EFG component perpendicular to the ligand plane. The isomer shift of 1, delta = 0.56 mm/s, approaches the delta-values reported for the six trigonal cofactor sites. The parameters of 1 and their importance for the cofactor cluster of nitrogenase are discussed.

Iron↗

PubMed2002

Structure of the deoxymyoglobin model [Fe(TPP)(2-MeHIm)] reveals unusual porphyrin core distortions.

The preparation and characterization of the deoxymyoglobin model (2-methylimidazole)(tetraphenylporphinato)iron(II) is described. The preparation and crystallization from chlorobenzene leads to a new crystalline phase that has been structurally characterized. The complex is the most ordered example of a deoxymyoglobin model yet characterized. The X-ray structure determination reveals a number of distortions both in the iron coordination group and in the porphyrin core that result from the steric bulk of the axial ligand. Some of these distortions have been noted previously in related species; however, the demonstration of porphyrin core distortions and an asymmetry in the Fe-N(p) bond distances are new observations. These may have functional significance for this important type of heme protein coordination group. The new structure emphasizes that high-spin iron(II) porphyrinate derivatives display substantial structural pliability with significant variations in iron atom displacements, porphyrin core hole size, and axial and equatorial Fe-N bond lengths. The new complex has also been characterized by zero-field and applied field magnetic Mössbauer spectroscopy. Mössbauer parameters are characteristic for high-spin iron, although they also reveal an extremely rhombic site for iron(II). Crystal data at 130 K for [Fe(TPP)(2-MeHIm)].1.5C(6)H(5)Cl: a = 12.334(3) A, b = 13.515(6) A, c = 14.241(7) A, alpha = 70.62(3) degrees, beta = 88.29(2) degrees, gamma = 88.24(3) degrees, triclinic, space group, P, V = 2238(2) A(3), Z = 2.

Crystallography, X-Ray↗

PubMed2002

Modeling dioxygen-activating centers in non-heme diiron enzymes: carboxylate shifts in diiron(II) complexes supported by sterically hindered carboxylate ligands.

General synthetic routes are described for a series of diiron(II) complexes supported by sterically demanding carboxylate ligands 2,6-di(p-tolyl)benzoate (Ar(Tol)CO(2)(-)) and 2,6-di(4-fluorophenyl)benzoate (Ar(4-FPh)CO(2)(-)). The interlocking nature of the m-terphenyl units in self-assembled [Fe(2)(mu-O(2)CAr(Tol))(2)(O(2)CAr(Tol))(2)L(2)] (L = C(5)H(5)N (4); 1-MeIm (5)) promotes the formation of coordination geometries analogous to those of the non-heme diiron cores in the enzymes RNR-R2 and Delta 9D. Magnetic susceptibility and Mössbauer studies of 4 and 5 revealed properties consistent with weak antiferromagnetic coupling between the high-spin iron(II) centers. Structural studies of several derivatives obtained by ligand substitution reactions demonstrated that the [Fe(2)(O(2)CAr')(4)L(2)] (Ar' = Ar(Tol); Ar(4-FPh)) module is geometrically flexible. Details of ligand migration within the tetracarboxylate diiron core, facilitated by carboxylate shifts, were probed by solution variable-temperature (19)F NMR spectroscopic studies of [Fe(2)(mu-O(2)CAr(4-FPh))(2)-(O(2)CAr(4-FPh))(2)(THF)(2)] (8) and [Fe(2)(mu-O(2)CAr(4-FPh))(4)(4-(t)BuC(5)H(4)N)(2)] (12). Dynamic motion in the primary coordination sphere controls the positioning of open sites and regulates the access of exogenous ligands, processes that also occur in non-heme diiron enzymes during catalysis.

Argon↗

PubMed2002

Determination of antiferromagnetic exchange coupling in the tetrahedral thiolate-bridged diferrous complex [Fe2(SEt)6]2-.

Protein-bound iron-sulfur clusters and their synthetic analogues are characterized by tetrahedral metal sites, multiple oxidation levels, and exchange coupling. The recent attainment of several all-ferrous protein clusters and the presence of sulfide- and thiolate-bridged sites in the all-ferrous state of the nitrogenase P-cluster provides an imperative for determination of exchange coupling between tetrahedral Fe(II) sites with sulfur bridges. The cluster in the previously reported compound (Et(4)N)(2)[Fe(2)(SEt)(6)] is centrosymmetric with distorted tetrahedral coordination and a planar Fe(2)(mu-SEt)(2) bridge unit. The compound is diamagnetic at 4.2 K, indicating antiferromagnetic coupling. The lower limit J > 80 cm(-)(1) (H = JS(1).S(2)) is obtained by Mössbauer spectroscopy. Analysis of magnetic susceptibility data affords J = 165 +/- 15 cm(-)(1). It is noteworthy that the J value of the diferrous pair obtained here is comparable to the J values reported for the mixed-valence state of plant-type Fe(2)S(2) ferredoxins. The near temperature independence of the quadrupole splitting (DeltaE(Q) = 3.25 mm/s at 4.2 K and 3.20 mm/s at 180 K) indicates that no excited orbital states are appreciably populated at temperatures less than 300 K. The paramagnetism arises solely from thermal population of the S = 1 state of the spin ladder. This work provides the only measure of antiferromagnetic coupling by Fe(II) pairs in a tetrahedral sulfur environment.

Catalysis↗

PubMed2003

Synthesis and reactions of cubane-type iron-sulfur-phosphine clusters, including soluble clusters of nuclearities 8 and 16.

A family of soluble, reduced iron-sulfur clusters with nuclearities 4, 8, and 16 having tertiary phosphine ligation and based on the Fe(4)S(4) cubane-type structural motif has been synthesized. The results of this investigation substantially extend and improve the results of our original work on iron-sulfur-phosphine clusters (Goh, C.; Segal, B. M.; Huang, J.; Long, J. R.; Holm, R. H. J. Am. Chem. Soc. 1996, 118, 11844). A general property of this cluster family is facile phosphine substitution. The clusters [Fe(4)S(4)(PR(3))(4)](+) are precursors to monosubstituted [Fe(4)S(4)(PR(3))(3)X] (X = Cl-, RS-), homoleptic [Fe(4)S(4)(SR)(4)](3-), and all-ferrous monocubanes [Fe(4)S(4)(PR(3))(4)] (R = Pr(i), Cy, Bu(t); generated in solution). In turn, [Fe(4)S(4)(PPr(i)()(3))(3)(SSiPh(3))] and [Fe(4)S(4)(PPr(i)(3))(4)] can be transformed into the dicubanes [Fe(8)S(8)(PPr(i)()(3))(4)(SSiPh(3))(2)] and [Fe(8)S(8)(PPr(i)((3))(6)], respectively. Further, the tetracubanes [Fe(16)S(16)(PR(3))(8)] are also accessible from [Fe(4)S(4)(PR(3))(4)] under different conditions. X-ray structures are described for [Fe(4)S(4)(PCy(3))(3)X] (X = Cl-, PhS-), [Fe(8)S(8)(PPr(i)(3))(4)(SSiPh(3))(2)], [Fe(8)S(8)(PPr(i)()(3))(6)], and [Fe(16)S(16)(PCy(3))(8)]. The monosubstituted clusters show different distortions of the [Fe(4)S(4)](+) cores from idealized cubic symmetry. The dicubanes possess edge-bridged double cubane structures with an Fe(2)(mu(4)-S)(2) bridge rhomb and idealized C(2)(h)() symmetry. The ready cleavage of these clusters into single cubanes is considered a probable consequence of strained bond angles at the mu(4)-S atoms. Tetracubanes contain four individual cubanes, each of which is implicated in two bridge rhombs so as to generate a cyclic structure of idealized D(4) symmetry. Redox properties and Mössbauer spectroscopic parameters are reported. The species [Fe(4)S(4)(PR(3))(4)] (in solution), [Fe(8)S(8)(PR(3))(6)], and [Fe(16)S(16)(PR(3))(8)] are the only synthetic all-ferrous clusters with tetrahedral iron sites that have been isolated. Their utility as precursors to other highly reduced iron-sulfur clusters is under investigation.

Azotobacter vinelandii↗

PubMed2002

Mössbauer study of reduced rubredoxin as purified and in whole cells. Structural correlation analysis of spin Hamiltonian parameters.

The [Fe(II)(Cys)(4)](2-) site of rubredoxin from Clostridium pasteurianum (Rd(red)) has been studied by Mössbauer spectroscopy in both purified protein and whole cells of Escherichia coli overproducing it. Excellent fits were obtained to an S = 2 spin Hamiltonian for D = 5.7(3) cm(-1), E/D = 0.25(2), delta = 0.70(3) mm/s, DeltaE(Q) = -3.25(2) mm/s, eta = 0.75(5), A(x) = -20.1(7) MHz, A(y) = -11.3(2) MHz, and A(z) = -33.4(14) MHz. These parameters were analyzed with crystal-field theory for the (5)D manifold of iron(II), revealing a d(z(2)) orbital ground state that is admixed by approximately 0.21 d(x(2) - y(2)). The spin-Hamiltonian parameters are consistent within the (5)D theory, apart from the zero-field splitting parameter, D. This problem was solved by extending the crystal-field treatment with spin-orbit coupling to spin-triplet d-d excited states of the iron. Theoretical estimates are given for the spin-triplet (D(T)) and spin-quintet contributions (D(Q)) to D based on excitation energies derived from time-dependent density functional theory, TD-DFT. The computational results were interpreted in terms of crystal-field theory, yielding the Racah parameters B = 682 cm(-1) and C = 2583 cm(-1). The theoretical analysis gives the relative magnitudes D(Q):D(T):D(ss) = 51%: 42%:7% (D(ss) originates from spin-spin interaction). The DFT analysis corroborates the pivotal role of the torsion angles (omega(i)) of the C-S(i) bonds in shaping the electronic structure of the iron(II) site. Rd(red) in overexpressing whole cells accounts for 60% of the Mössbauer absorption. The Rd(red) spectra from whole cells are virtually identical to those of the purified protein. By using the theoretical omega dependence of the spin Hamiltonian parameters, the torsions for Rd(red) in whole cells and purified protein samples are estimated to be the same within 2 degrees. These findings establish Mössbauer spectroscopy as a structural tool for investigating iron sites in whole cells.

Algorithms↗

PubMed2004

A structural and Mössbauer study of complexes with Fe(2)(micro-O(H))(2) cores: stepwise oxidation from Fe(II)(micro-OH)(2)Fe(II) through Fe(II)(micro-OH)(2)Fe(III) to Fe(III)(micro-O)(micro-OH)Fe(III).

Dinuclear non-heme iron clusters containing oxo, hydroxo, or carboxylato bridges are found in a number of enzymes involved in O(2) metabolism such as methane monooxygenase, ribonucleotide reductase, and fatty acid desaturases. Efforts to model structural and/or functional features of the protein-bound clusters have prompted the preparation and study of complexes that contain Fe(micro-O(H))(2)Fe cores. Here we report the structures and spectroscopic properties of a family of diiron complexes with the same tetradentate N4 ligand in one ligand topology, namely [(alpha-BPMCN)(2)Fe(II)(2)(micro-OH)(2)](CF(3)SO(3))(2) (1), [(alpha-BPMCN)(2)Fe(II)Fe(III)(micro-OH)(2)](CF(3)SO(3))(3) (2), and [(alpha-BPMCN)(2)Fe(III)(2)(micro-O)(micro-OH)](CF(3)SO(3))(3) (3) (BPMCN = N,N'-dimethyl-N,N'-bis(2-pyridylmethyl)-trans-1,2-diaminocyclohexane). Stepwise one-electron oxidations of 1 to 2 and then to 3 demonstrate the versatility of the Fe(micro-O(H))(2)Fe diamond core to support a number of oxidation states with little structural rearrangement. Insight into the electronic structure of 1, 2', and 3 has been obtained from a detailed Mössbauer investigation (2' differs from 2 in having a different complement of counterions). Mixed-valence complex 2' is ferromagnetically coupled, with J = -15 +/- 5 cm(-)(1) (H = JS(1).S(2)). For the S = (9)/(2) ground multiplet we have determined the zero-field splitting parameter, D(9/2) = -1.5 +/- 0.1 cm(-)(1), and the hyperfine parameters of the ferric and ferrous sites. For T < 12 K, the S = (9)/(2) multiplet has uncommon relaxation behavior. Thus, M(S) = -(9)/(2) <--> M(S) = +(9)/(2) ground state transition is slow while deltaM(S) = +/-1 transitions between equally signed M(S) levels are fast on the time scale of Mössbauer spectroscopy. Below 100 K, complex 2' is trapped in the Fe(1)(III)Fe(2)(II) ground state; above this temperature, it exhibits thermally assisted electron hopping into the state Fe(1)(II)Fe(2)(III). The temperature dependence of the isomer shifts was corrected for second-order Doppler shift, obtained from the study of diferrous 1. The resultant true shifts were analyzed in a two-state hopping model. The diferric complex 3 is antiferromagnetically coupled with J = 90 +/- 15 cm(-)(1), estimated from a variable-temperature Mössbauer analysis.

Binding Sites↗

PubMed2004

Synthesis and spectroscopy of micro-oxo (O(2)(-))-bridged heme/non-heme diiron complexes: models for the active site of nitric oxide reductase.

In this paper, we describe the synthesis and study of a series of heme/non-heme Fe-O-Fe' complexes supported by a porphyrin and the tripodal nitrogen ligand TMPA [TMPA = tris(2-pyridylmethyl)amine]. The complete synthesis of [((6)L)Fe-O-Fe(X)](+) (1) (X = OMe(-) or Cl(-), 69:31 ratio), where (6)L is the dianion of 5-(o-O-[(N,N-bis(2-pyridylmethyl)-2-(6-methoxyl)pyridinemethanamine)phenyl]-10,15,20-tris(2,6-difluorophenyl)porphine, is reported. The crystal structure for 1.PF(6) reveals an intramolecular heme/non-heme diferric complex bridged by an Fe-O-Fe' moiety; 90 degree angle (Fe-O-Fe') = 166.7(3) degrees, and d(Fe.Fe') = 3.556 A. Crystal data for C(70)H(57)ClF(12)Fe(2)N(8)O(3)P (1.PF(6)): triclinic, Ponemacr;, a = 13.185(3) A, b = 14.590 (3) A, c = 16.885(4) A, alpha = 104.219(4) degrees, beta = 91.572(4) degrees, gamma = 107.907(4) degrees, V = 2977.3(11) A(3), Z = 2, T = 150(2) K. Complex 1 (where X = Cl(-)) is further characterized by UV-vis (lambda(max) = 328, 416 (Soret), 569 nm), (1)H NMR (delta 27-24 [TMPA -CH(2)-], 16.1 [pyrrole-H], 15.2-10.5 [PY-3H, PY-5H], 7.9-7.2 [m- and p-phenyl-H], 6.9-5.8 [PY-4H] ppm), resonance Raman (nu(as)(Fe-O-Fe') 844 cm(-)(1)), and Mössbauer (delta(Fe) = 0.47, 0.41 mm/s; deltaE(A) = 1.59, 0.55 mm/s; 80 K) spectroscopies, MALDI-TOF mass spectrometry (m/z 1202), and SQUID susceptometry (J = - 114.82 cm(-)(1), S = 0). We have also synthesized a series of 3-, 4-, and 5-methyl-substituted as well as selectively deuterated TMPA(Fe') complexes and condensed these with the hydroxo complex (F(8))FeOH or (F(8)-d(8))FeOH to yield "untethered" Fe-O-Fe' analogues. Along with selective deuteration of the methylene hydrogens in TMPA, complete (1)H NMR spectroscopic assignments for 1 have been accomplished. The magnetic properties of several of the untethered complexes and a comparison to those of 1 are also presented. Complex 1 and related species represent good structural and spectroscopic models for the heme/non-heme diiron active site in the enzyme nitric oxide reductase.

Binding Sites↗

PubMed2004

Iron(II) carboxylate complexes based on a tetraimidazole ligand as models of the photosynthetic non-heme ferrous sites: synthesis, crystal structure, and Mössbauer and magnetic studies.

The preparations, X-ray structures, and detailed physical characterization are presented for new complexes involving an iron(II) center, a tetraimidazole ligand (TIM), and different carboxylates. [Fe(TIM)(C(6)H(5)CH(2)CO(2))](ClO(4)) (1) crystallizes in the Pbca space group with a = 10.8947(13), b = 20.343(2), and c = 22.833(3) A, Z = 8, and V = 5060.6(11) A(3). [Fe(TIM)(CH(3)CO(2))](ClO(4)) (2) crystallizes in the Ia space group with a = 17.117(2), b = 10.3358(12), and c = 25.658(3) A, beta = 90.301(13) degrees, Z = 8, and V = 4539.5(9) A(3). In both structures, the iron(II) is hexacoordinated to the four N(imidazole) donors of the TIM ligand and the two O donors of a bidentate carboxylate. The flexibility of the carboxylate bidentate coordination, symmetrical or more or less asymmetrical, associated with the steric demand of the TIM ligand results in a remarkable versatility of the Fe(II)N(4)O(2) coordination geometry. The diversity in carboxylate bidentate coordination modes has allowed us to clearly show the importance of the structural and electronic effects, through IR and Mössbauer spectroscopy, of this apparently tenuous carboxylate shift. Comparison of the structural and Mössbauer properties of these complexes with the non-heme ferrous site of photosynthetic systems (i) shows that the metric parameters of site 2b, including the symmetrically chelated bidentate carboxylate, are closer to those of the non-heme ferrous site in the bacterial reaction centers of Rhodopseudomonas viridis and R. sphaeroides and (ii) suggests that the ligand environment of the non-heme ferrous center of PS 2 is close to the axially distorted octahedral symmetry resulting from an asymmetrical bidentate coordination of the -CO(2) motif, as in complex 1.

Animals↗

PubMed2005

Normal-mode analysis of FeCl4- and Fe2S2Cl42- via vibrational mössbauer, resonance Raman, and FT-IR spectroscopies.

[NEt(4)][FeCl(4)], [P(C(6)H(5))(4)][FeCl(4)], and [NEt(4)](2)[Fe(2)S(2)Cl(4)] have been examined using (57)Fe nuclear resonance vibrational spectroscopy (NRVS). These complexes serve as simple models for Fe-S clusters in metalloproteins. The (57)Fe partial vibrational density of states (PVDOS) spectra were interpreted by computation of the normal modes assuming Urey-Bradley force fields, using additional information from infrared and Raman spectra. Previously published force constants were used as initial values; the new constraints from NRVS frequencies and amplitudes were then used to refine the force field parameters in a nonlinear least-squares analysis. The normal-mode calculations were able to quantitatively reproduce both the frequencies and the amplitudes of the intramolecular-mode (57)Fe PVDOS. The optimized force constants for bending, stretching, and nonbonded interactions agree well with previously reported values. In addition, the NRVS technique also allowed clear observation of anion-cation lattice modes below 100 cm(-1) that are nontrivial to observe by conventional spectroscopies. These features were successfully reproduced, either by assuming whole-body motions of point-mass anions and cations or by simulations using all of the atoms in the unit cell. The advantages of a combined NRVS, Raman, and IR approach to characterization of Fe-S complexes are discussed.

Algorithms↗

PubMed2005

Spectroscopic approaches to elucidating novel iron-sulfur chemistry in the "radical-Sam" protein superfamily.

Electron paramagnetic resonance (EPR), electron-nuclear double resonance (ENDOR), and Mössbauer spectroscopies and other physical methods have provided important new insights into the radical-SAM superfamily of proteins, which use iron-sulfur clusters and S-adenosylmethionine to initiate H atom abstraction reactions. This remarkable chemistry involves the generation of the extremely reactive 5'-deoxyadenosyl radical, the same radical intermediate utilized in B12-dependent reactions. Although early speculation focused on the possibility of an organometallic intermediate in radical-SAM reactions, current evidence points to novel chemistry involving a site-differentiated [4Fe-4S] cluster. The focus of this forum article is on one member of the radical-SAM superfamily, pyruvate formate-lyase activating enzyme, and how physical methods, primarily EPR and ENDOR spectroscopies, are contributing to our understanding of its structure and mechanism. New ENDOR data supporting coordination of the methionine moiety of SAM to the unique site of the [4Fe-4S]2+/+ cluster are presented.

Binding Sites↗

PubMed2005

Rapid freeze-quench 57Fe Mössbauer spectroscopy: monitoring changes of an iron-containing active site during a biochemical reaction.

Nuclear gamma resonance spectroscopy, also known as Mössbauer spectroscopy, is a technique that probes transitions between the nuclear ground state and a low-lying nuclear excited state. The nucleus most amenable to Mössbauer spectroscopy is 57Fe, and 57Fe Mössbauer spectroscopy provides detailed information about the chemical environment and electronic structure of iron. Iron is by far the most structurally and functionally diverse metal ion in biology, and 57Fe Mössbauer spectroscopy has played an important role in the elucidation of its biochemistry. In this article, we give a brief introduction to the technique and then focus on two recent exciting developments pertaining to the application of 57Fe Mössbauer spectroscopy in biochemistry. The first is the use of the rapid freeze-quench method in conjunction with Mössbauer spectroscopy to monitor changes at the Fe site during a biochemical reaction. This method has allowed for trapping and subsequent detailed spectroscopic characterization of reactive intermediates and thus has provided unique insight into the reaction mechanisms of Fe-containing enzymes. We outline the methodology using two examples: (1) oxygen activation by the non-heme diiron enzymes and (2) oxygen activation by taurine:alpha-ketoglutarate dioxygenase (TauD). The second development concerns the calculation of Mössbauer parameters using density functional theory (DFT) methods. By using the example of TauD, we show that comparison of experimental Mössbauer parameters with those obtained from calculations on model systems can be used to provide insight into the structure of a reaction intermediate.

Binding Sites↗

PubMed2006

Effect of N-methylation of macrocyclic amine ligands on the spin state of iron(III): a tale of two fluoro complexes.

Syntheses and characterization of [(cyclamacetate)FeF]PF6 (1) and the corresponding N-methylated complex [(trimethylcyclamacetate)FeF]PF6 (3) are presented. Compound 1 is prepared in good yields from the analogous chloro complex, whereas 3 is prepared by hydrolysis of the oxo-bridged diiron compound (Me3cyclam-acetate)Fe-O-FeCl3 (2) in the presence of PF(6) anions. Magnetic susceptibility and spectroscopic data including electron paramagnetic resonance and Mössbauer spectra indicate that 1 contains low-spin Fe(III) (S = 1/2), while 3 is high spin (S = 5/2). Both octahedral fluoro complexes were investigated theoretically by density functional theory in order to determine why the spin states of the two molecules are different. Energies calculated using the B3LYP functional correctly predict 1 to have a low-spin S = 1/2 ground state and 3 to be high spin, regardless of whether a solvation model is included. The difference between 1 and 3 is most likely a combination of steric effects caused by the N-methyl groups, which compel the Fe-N bond distances to be longer in 3 than they ordinarily would be, and also electronic effects, which cause the N-methylated ligand to be a weaker sigma donor than its nonmethylated counterpart.

Amines↗

PubMed2006

Hexanuclear iron(III) salicylaldoximato complexes presenting the [Fe6(mu3-O)2(mu2-OR)2]12+ core: syntheses, crystal structures, and spectroscopic and magnetic characterization.

The use of salicylaldehyde oxime (H2salox) in iron(III) carboxylate chemistry has yielded two new hexanuclear compounds [Fe6(mu3-O)2(O2CPh)10(salox)2(L)2].xMeCN.yH2O [L = MeCONH2, x = 6, y = 0 (1); L = H2O, x = 2, y = 3 (2)]. Compound 1 crystallizes in the triclinic space group P with (at 25 degrees C) a = 13.210(8) A, b = 13.87(1) A, c = 17.04(1) A, alpha = 105.79(2) degrees , beta = 96.72(2) degrees , gamma = 116.69(2) degrees , V = 2578.17(2) A(3), and Z = 1. Compound 2 crystallizes in the monoclinic space group C2/c with (at 25 degrees C) a = 21.81(1) A, b = 17.93(1) A, c = 27.72(1) A, beta = 111.70(2) degrees , V = 10070(10) A(3), and Z = 4. Complexes 1 and 2 contain the [Fe6(mu3-O)2(mu2-OR)2]12+ core and can be considered as two [Fe3(mu3-O)] triangular subunits linked by two mu2-oximato O atoms of the salox2- ligands, which show the less common mu3:eta1:eta2:eta1 coordination mode. The benzoato ligands are coordinated through the usual syn,syn-mu2:eta1:eta1 mode. The terminal MeCONH2 ligand in 1 is the hydrolysis product of the acetonitrile solvent in the presence of the metal ions. Mössbauer spectra from powdered samples of 2 give rise to two well-resolved doublets with an average isomer shift consistent with that of high-spin Fe(III) ions. The two doublets, at an approximate 1:2 ratio, are characterized by different quadrupole splittings and are assigned to the nonequivalent Fe(III) ions of the cluster. Magnetic measurements of 2 in the 2-300 K temperature range reveal antiferromagnetic interactions between the Fe(III) ions, stabilizing an S = 0 ground state. NMR relaxation data have been used to investigate the energy separation between the low-lying states, and the results are in agreement with the susceptibility data.

Chemistry, Inorganic↗

PubMed2006

Electronic, magnetic, and structural characterization of the five-coordinate, high-spin iron(II) nitrato complex [Fe(TpivPP)(NO3)]-.

The preparation and characterization of the five-coordinate iron(II) porphyrinate derivative [Fe(TpivPP)(NO3)]- (TpivPP = picket-fence porphyrin) is described. Structural and magnetic susceptibility data support a high-spin state (S = 2) assignment for this species. The anionic axial nitrate ligand is O-bound, through a single O atom, with an Fe-O bond length of 2.069(4) A. The planar nitrate ligand bisects a N(p)-Fe-N(p) angle. The average Fe-N(p) bond length is 2.070(16) A. The Fe atom is located 0.49 A out of the 24-atom mean porphyrin plane toward the nitrate ligand. From solid-state Mössbauer data, the isomer shift of 0.98 mm/s at 77 K is entirely consistent with high-spin iron(II). However the quadrupole splitting of 3.59 mm/s at 77 K is unusually high for iron(II), S = 2 systems but within the range of other five-coordinate high-spin ferrous complexes with a single anionic axial ligand. Crystal data for [K(222)][Fe(TpivPP)(NO3)] x C6H5Cl: a = 17.888 (5) A, b = 21.500 (10) A, c = 22.514 (11) A, beta = 100.32 (3) degrees, monoclinic, space group P2(1)/n, V = 8519 A3, Z = 4.

Iron↗

PubMed2006

Structure-function correlations in Iron(II) tris(pyrazolyl)borate spin-state crossover complexes.

Iron(II) poly(pyrazolyl)borate complexes have been investigated to determine the impact of substituent effects, intramolecular ligand distortions, and intermolecular supramolecular structures on the spin-state crossover (SCO) behavior. The molecular structure of Fe[HB(3,4,5-Me3pz)3]2 (pz = pyrazolyl ring), a complex known to remain high spin when the temperature is lowered, reveals that this complex has an intramolecular ring-twist distortion that is not observed in analogous complexes that do exhibit a SCO at low temperatures, thus indicating that this distortion greatly influences the properties of these complexes. The structure of Fe[B(3-(cy)Prpz)4]2.(CH3OH) ((cy)Pr = cyclopropyl ring) at 294 K has two independent molecules in the unit cell, both of which are high spin; only one of these high-spin iron(II) sites, the site with the lesser ring-twist distortion, is observed to be low-spin iron(II) in the 90 K structure. A careful evaluation of the supramolecular structures of these complexes and several similar complexes reported previously revealed no strong correlation between the supramolecular packing forces and their SCO behavior. Magnetic and Mössbauer spectral measurements on Fe[B(3-(cy)Prpz)4]2 and Fe[HB(3-(cy)Prpz)3]2 indicate that both complexes exhibit a partial SCO from fully high-spin iron(II) at higher temperatures, respectively, to a 50:50 high-spin/low-spin mixture of iron(II) below 100 K. These results may be understood, in the former case, by the differences in ring-twisting and, in the latter case, by a phase transition; in all complexes in which a phase transition is observed, this change dominates the SCO behavior. A comparison of the Mössbauer spectral properties of these two complexes and of Fe[HB(3-Mepz)3]2 with that of other complexes reveals correlations between the Mössbauer-effect isomer shift and the average Fe-N bond distance and between the quadrupole splitting and the average FeN-NB intraligand dihedral torsion angles and the distortion of the average N-Fe-N intraligand bond angles.

Borates↗

PubMed2006

Low-spin bis(2-methylimidazole)(octaethylporphyrinato)iron(III) chloride (perp-[Fe(OEP)(2-MeHIm)(2)]Cl): a consequence of hydrogen bonding?

The synthesis and characterization of low-spin bis(2-methylimidazole)(octaethylporphyrinato)iron(III) chloride (perp[Fe(OEP)(2-MeHIm)2]Cl) is reported. The structure shows that the cation is a low-spin species with two imidazole ligands having a relative perpendicular orientation. The porphyrin core is very ruffled, which leads to shortened equatorial bonds of 1.974(4) A and slightly elongated axial Fe-N bond lengths of 2.005(10) A that are about 0.02 A shorter and 0.03 A longer, respectively, in comparison to bis-imidazole ligated iron(III) species with parallel oriented axial ligands. A one-dimensional hydrogen-bond chain is formed between chloride anions and uncoordinated imidazole nitrogen atoms. Compared with paral-[Fe(OEP)(2-MeHIm)2]ClO4, hydrogen bonding may play an important role in the differences in the two structures. Mössbauer spectra show broadened quadrupole doublets with quadrupole splittings of 1.81 mm/s at RT and 1.94 mm/s at 20 K. The isomer shift ranges from 0.26 to 0.36 mm/s. These confirm that the title complex is a low-spin iron(III) species with the ground state (dxy)2(dxz,dyz)3. Crystal data: monoclinic, space group P2(1)/c, a = 14.066(3) A, b, 20.883(4) A, c = 19.245(4) A, beta = 109.67 degrees , and Z = 4.

Crystallography, X-Ray↗

PubMed2001

Rational reprogramming of the R2 subunit of Escherichia coli ribonucleotide reductase into a self-hydroxylating monooxygenase.

The outcome of O2 activation at the diiron(II) cluster in the R2 subunit of Escherichia coli (class I) ribonucleotide reductase has been rationally altered from the normal tyrosyl radical (Y122*) production to self-hydroxylation of a phenylalanine side-chain by two amino acid substitutions that leave intact the (histidine)2-(carboxylate)4 ligand set characteristic of the diiron-carboxylate family. Iron ligand Asp (D) 84 was replaced with Glu (E), the amino acid found in the cognate position of the structurally similar diiron-carboxylate protein, methane monooxygenase hydroxylase (MMOH). We previously showed that this substitution allows accumulation of a mu-1,2-peroxodiiron(III) intermediate, which does not accumulate in the wild-type (wt) protein and is probably a structural homologue of intermediate P (H(peroxo)) in O2 activation by MMOH. In addition, the near-surface residue Trp (W) 48 was replaced with Phe (F), blocking transfer of the "extra" electron that occurs in wt R2 during formation of the formally Fe(III)Fe(IV) cluster X. Decay of the mu-1,2-peroxodiiron(III) complex in R2-W48F/D84E gives an initial brown product, which contains very little Y122* and which converts very slowly (t1/2 approximately 7 h) upon incubation at 0 degrees C to an intensely purple final product. X-ray crystallographic analysis of the purple product indicates that F208 has undergone epsilon-hydroxylation and the resulting phenol has shifted significantly to become a ligand to Fe2 of the diiron cluster. Resonance Raman (RR) spectra of the purple product generated with 16O2 or 18O2 show appropriate isotopic sensitivity in bands assigned to O-phenyl and Fe-O-phenyl vibrational modes, confirming that the oxygen of the Fe(III)-phenolate species is derived from O2. Chemical analysis, experiments involving interception of the hydroxylating intermediate with exogenous reductant, and Mössbauer and EXAFS characterization of the brown and purple species establish that F208 hydroxylation occurs during decay of the peroxo complex and formation of the initial brown product. The slow transition to the purple Fe(III)-phenolate species is ascribed to a ligand rearrangement in which mu-O2- is lost and the F208-derived phenolate coordinates. The reprogramming to F208 monooxygenase requires both amino acid substitutions, as very little epsilon-hydroxyphenylalanine is formed and pathways leading to Y122* formation predominate in both R2-D84E and R2-W48F.

Amino Acid Substitution↗