SEARCH · PubMed Health

Results for “Biodegradation, Environmental”

Explore indexed PubMed citations for clinical trials, systematic reviews and public health research. Read source abstracts and follow each citation to its original PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 325 records · Page 18Linked to original sources

PubMed2006

Microbial diversity in hypersaline wastewater: the example of tanneries.

In contrast to conventional wastewater treatment plants and saline environments, little is known regarding the microbial diversity of hypersaline wastewater. In this study, the microbial communities of a hypersaline tannery effluent, and those of three treatment systems operating with the tannery effluent, were investigated using 16S rDNA phylogenetic markers. The comparative analysis of 377 bacterial sequences revealed the high diversity of this type of hypersaline environment, clustering within 193 phylotypes (> or = 97% similarity) and covering 14 of the 52 divisions of the bacterial domain, i.e. Proteobacteria, Bacteroidetes, Firmicutes, Actinobacteria, Chlorobi, Planctomycetes, Spirochaetes, Synergistes, Chloroflexi, Thermotogae, Verrucomicrobia, OP3, OP11 and TM7. Most of the phylotypes were related to halophilic and pollutant-degrading bacteria. Using statistical analysis, the diversity of this type of environment was compared to that of other environmental samples selected on the basis of their salinity, oxygen content and organic load.

Bacteria↗

PubMed1986

Effects of pH on the environmental fate of [14C]aldicarb in an aquatic microcosm.

The role of pH in determining the environmental fate of [14C]aldicarb was examined in an aquatic microcosm. Only minor amounts of the radiochemical were absorbed by aquatic organisms at any pH. Of the radioactivity absorbed, greater than 75% was rapidly metabolized and incorporated into tissues. Minor differences in the in vivo spectrum of aldicarb and metabolites as a function of pH were discerned for fish; the quantitative and qualitative distribution of aldicarb and its metabolites was identical for the other organisms across the pH levels. The most notable difference in metabolite spectrum appearing in the water as a function of pH was the absence of aldicarb sulfone at pH 4 on Day 6. In contrast, aldicarb sulfoxide was found as the major metabolite and aldicarb was completely lacking at all three pH levels. Since aldicarb sulfoxide is biologically active, disappearance of the parent compound does not eliminate hazard. The general effects of pH on the environmental fate of aldicarb are negligible on Day 6 but may be more pronounced at other time periods.

Aldicarb↗

PubMed2005

Enhanced uptake of As, Zn, and Cu by Vetiveria zizanioides and Zea mays using chelating agents.

Vetiveria zizaniodes (vetiver) is commonly known for its effectiveness in soil and sediment erosion control. It can tolerate to extreme soil conditions and produce a high biomass even growing in contaminated areas. Zea mays (maize) can also produce a very high biomass with a fast growth rate and possesses some degree of metal tolerance. A greenhouse study was conducted to investigate the feasibility of using vetiver and maize for remediation of arsenic (As)-, zinc (Zn-), and copper (Cu)-amended soils and evaluate the effects of chelating agents on metal uptake by these plants. Vetiver had a better growth (dry weight yield of root and shoot) than maize under different treatment conditions. The effects of different chelating agents on As, Zn, and Cu extraction from soil to soil solution were studied. Among the nine chelating agents used, it was noted that 20 mmol NTA could maximize As and Zn bioavailability, while 20 mmol HEIDA could maximize Cu bioavailability in the soil solution. The surge time in maximizing metal uptake ranged from 16 to 20 days which indicated that timing on plant harvest was an important factor in enhanced metal accumulation. In general, vetiver was a more suitable plant species than maize in terms of phytoextraction of metals from metal-contaminated soil. Application of NTA in As-amended soil and HEIDA in Cu-amended soil at the rate of 20 mmol kg(-1) increased 3-4-fold of As and Cu in shoot of both plants, whereas application of NTA (20 mmol kg(-1)) increased 37- and 1.5-fold of Zn accumulation in shoot of vetiver and maize, respectively. The potential environmental risk of metal mobility caused by chelating agents used for phytoextraction should not be overlooked.

Arsenic↗

PubMed2001

A review of the environmental fate and aquatic effects of a series of C4 and C8 oxo-process chemicals.

Environmental fate and aquatic effects data were examined for a series of C4 (butyl acetate, 1-butanol, isobutyl alcohol) and C8 (2-ethylhexanol and 2-ethylhexanoic acid) oxo-process chemicals. Manufacturing of these chemicals requires enclosed equipment, so environmental releases are generally limited to volatilization during their use, handling or transport. C4 compounds are more soluble and volatile, and would bind to soil and sediment to a lesser extent than C8 compounds. All five compounds were readily biodegradable based on OECD and APHA tests conducted up to 28 days. Atmospheric photo-oxidation half-lives range from 0.43 to 3.8 days. Toxicity data show that all five compounds pose generally low concern to fish, invertebrates, algae, and microorganisms. Overall, the data show that inadvertent releases of these compounds into the environment would be rapidly biodegraded in soil and water, volatilize to the atmosphere subject to photo-oxidation, while any residues remaining in water would pose a negligible threat to aquatic life.

1-Butanol↗

PubMed2003

Biological treatment process of air loaded with an ammonia and hydrogen sulfide mixture.

The physico-chemical characteristics of granulated sludge lead us to develop its use as a packing material in air biofiltration. Then, the aim of this study is to investigate the potential of unit systems packed with this support in terms of ammonia and hydrogen sulfide emissions treatment. Two laboratory scale pilot biofilters were used. A volumetric load of 680 g H2S m(-3) empty bed day(-1) and 85 g NH3 m(-3) empty bed day(-1) was applied for eight weeks to a unit called BGSn (column packed with granulated sludge and mainly supplied with hydrogen sulfide); a volumetric load of 170 g H2S m(-3) empty bed day(-1) and 340 g NH3 m(-3) empty bed day(-1) was applied for eight weeks to the other called BGNs (column packed with granulated sludge and mainly supplied with ammonia). Ammonia and hydrogen sulfide elimination occur in the biofilters simultaneously. The hydrogen sulphide and ammonia removal efficiencies reached are very high: 100% and 80% for BGSn; 100% and 80% for BGNs respectively. Hydrogen sulfide is oxidized into sulphate and sulfur. The ammonia oxidation products are nitrite and nitrate. The nitrogen error mass balance is high for BGSn (60%) and BGNs (36%). This result could be explained by the denitrification process which would have occurred in anaerobic zones. High percentages of ammonia or hydrogen sulfide are oxidized on the first half of the column. The oxidation of high amounts of hydrogen sulfide would involve some environmental stress on nitrifying bacterial growth and activity.

Air Pollutants↗

PubMedDate not supplied

Degradation half-life times of PCDDs, PCDFs and PCBs for environmental fate modeling.

Literature search of the knowledge on the degradation of persistent organic pollutants (POPs) in environmental compartments air, water, soil and sediment was done in purpose to find properties of POPs of interest for modeling. One degradation process, hydrolysis (chemical degradation), was omitted as negligibly slow for POPs studied. The other two, photolysis and biodegradation processes, were considered separately in purpose to develop estimation procedures. The estimates can be given as pseudo first-order rate constants kP for photolysis and kB for biodegradation. For each compartment, an overall degradation rate is k(tot) = kP + kB and lifetime t(1/2) = ln 2/k(tot). The latter values, lifetimes in each compartment, will be used as input parameters to the Baltic Sea model.

Benzofurans↗

PubMed2003

Microbial degradation of illicit drugs, their precursors, and manufacturing by-products: implications for clandestine drug laboratory investigation and environmental assessment.

Chemicals associated with clandestine drug laboratories are often disposed of covertly into soil, sewerage systems, or public waste management facilities. There are two significant issues relating to such dumps of materials; they might contain valuable evidence as to drug manufacture, and they might be a source of pollution. This study presents initial findings in relation to the impact microorganisms from environmental sources have upon drugs, their precursors, and manufacturing by-products. The aim of this study was to identify which chemicals associated with clandestine drug laboratories persist in the environment in order to allow forensic drug chemists to link discarded residues with the method of manufacture, and to allow the environmental impact of clandestine drug laboratories to be assessed accurately. When exposed to soil microorganisms, phenyl-2-propanone (P2P) was rapidly metabolized into mixtures of 1-phenyl-2-propanol, 1-phenyl-1,2-propanedione, 1-hydroxy-1-phenyl-2-propanone, 2-hydroxy-1-phenyl-1-propanone, and the two diastereoisomers of 1-phenyl-1,2-propanediol. On the other hand, when exposed under the same conditions, methylamphetamine sulphate (MAS) remained virtually unchanged. Implications relating to evidence gathering for forensic purposes and to environmental assessment of clandestine drug laboratories are discussed.

2-Propanol↗

PubMed1996

Bioaugmentation as a soil bioremediation approach.

The debate over the efficacy of bioaugmentation rages on, with research continuing to demonstrate that its advantages for soil bioremediation are difficult to predict; however, when it works, the results are often very encouraging. The difficulties arise from, among others, the diversity of the microorganisms used, environmental heterogeneity, and variations in the influence of critical parameters (e.g. humidity, microbial predation and "bioavailability') which, unfortunately, are not even always identified.

Biodegradation, Environmental↗

PubMed2006

Bacterial diversity in the active stage of a bioremediation system for mineral oil hydrocarbon-contaminated soils.

Soils contaminated with mineral oil hydrocarbons are often cleaned in off-site bioremediation systems. In order to find out which bacteria are active during the degradation phase in such systems, the diversity of the active microflora in a degrading soil remediation system was investigated by small-subunit (SSU) rRNA analysis. Two sequential RNA extracts from one soil sample were generated by a procedure incorporating bead beating. Both extracts were analysed separately by generating individual SSU rDNA clone libraries from cDNA of the two extracts. The sequencing results showed moderate diversity. The two clone libraries were dominated by Gammaproteobacteria, especially Pseudomonas spp. Alphaproteobacteria and Betaproteobacteria were two other large groups in the clone libraries. Actinobacteria, Firmicutes, Bacteroidetes and Epsilonproteobacteria were detected in lower numbers. The obtained sequences were predominantly related to genera for which cultivated representatives have been described, but were often clustered together in the phylogenetic tree, and the sequences that were most similar were originally obtained from soils and not from pure cultures. Most of the dominant genera in the clone libraries, e.g. Pseudomonas, Acinetobacter, Sphingomonas, Acidovorax and Thiobacillus, had already been detected in (mineral oil hydrocarbon) contaminated environmental samples. The occurrence of the genera Zymomonas and Rhodoferax was novel in mineral oil hydrocarbon-contaminated soil.

Bacteria↗

PubMed1992

Styrene formation by the decomposition by Pichia carsonii of trans-cinnamic acid added to a ground fish product.

It is not well known how the formation of styrene by microorganisms can occur in foods. In this study, we described and characterized the production of styrene by a yeast isolated from chikuwa fish paste. The styrene was not detected in fresh and normal food products nor in the food package's plastic film. The food containing styrene contained cinnamic acid as an antimicrobial agent and spice, and it was contaminated by 5.4 x 10(6) CFU of a yeast per gram. On the basis of morphological and biochemical features, the yeast isolated was determined to be a strain of Pichia carsonii, now designated strain CHI. Strain CHI, which was able to grow on cinnamic acid, had the ability to form styrene from trans-cinnamic acid via trans-p-coumaric and caffeic acids. The MIC of trans-cinnamic acid against strain CHI was 230 micrograms/ml. Strain CHI thrived well at pH 5.0 and 26.0 degrees C and was tolerant to 20% NaCl. Styrene was subsequently produced in ground fish meat containing cinnamic acid into which strain CHI had been inoculated. The yeast was found to be an environmental contaminant in food processing plants of the chikuwa manufacturer.

Biodegradation, Environmental↗

PubMed1995

Biological degradation of resin acids in wood chips by wood-inhabiting fungi.

Resin acids in many pulp mill effluents are primary sources of toxicity to fish. Inconsistent biological detoxification of chlorinated and nonchlorinated resin acids in secondary treatment of pulp mill effluents is a continuing source of concern. An alternative approach to effluent detoxification is to remove or modify the toxic compounds present in wood chips prior to pulping. Results from experiments in which lodgepole pine sapwood chips were inoculated with several fungal candidates indicate that the total resin acid content can be reduced by up to 67% after fungal growth. Such a treatment could be an efficient and environmentally acceptable way for deresinating wood chips and so decreasing the toxicity of pulp mill effluents.

Biodegradation, Environmental↗

PubMed2006

Whole-genome analysis of the methyl tert-butyl ether-degrading beta-proteobacterium Methylibium petroleiphilum PM1.

Methylibium petroleiphilum PM1 is a methylotroph distinguished by its ability to completely metabolize the fuel oxygenate methyl tert-butyl ether (MTBE). Strain PM1 also degrades aromatic (benzene, toluene, and xylene) and straight-chain (C(5) to C(12)) hydrocarbons present in petroleum products. Whole-genome analysis of PM1 revealed an approximately 4-Mb circular chromosome and an approximately 600-kb megaplasmid, containing 3,831 and 646 genes, respectively. Aromatic hydrocarbon and alkane degradation, metal resistance, and methylotrophy are encoded on the chromosome. The megaplasmid contains an unusual t-RNA island, numerous insertion sequences, and large repeated elements, including a 40-kb region also present on the chromosome and a 29-kb tandem repeat encoding phosphonate transport and cobalamin biosynthesis. The megaplasmid also codes for alkane degradation and was shown to play an essential role in MTBE degradation through plasmid-curing experiments. Discrepancies between the insertion sequence element distribution patterns, the distributions of best BLASTP hits among major phylogenetic groups, and the G+C contents of the chromosome (69.2%) and plasmid (66%), together with comparative genome hybridization experiments, suggest that the plasmid was recently acquired and apparently carries the genetic information responsible for PM1's ability to degrade MTBE. Comparative genomic hybridization analysis with two PM1-like MTBE-degrading environmental isolates (approximately 99% identical 16S rRNA gene sequences) showed that the plasmid was highly conserved (ca. 99% identical), whereas the chromosomes were too diverse to conduct resequencing analysis. PM1's genome sequence provides a foundation for investigating MTBE biodegradation and exploring the genetic regulation of multiple biodegradation pathways in M. petroleiphilum and other MTBE-degrading beta-proteobacteria.

Base Sequence↗

PubMed1992

Molecular mechanisms of genetic adaptation to xenobiotic compounds.

Microorganisms in the environment can often adapt to use xenobiotic chemicals as novel growth and energy substrates. Specialized enzyme systems and metabolic pathways for the degradation of man-made compounds such as chlorobiphenyls and chlorobenzenes have been found in microorganisms isolated from geographically separated areas of the world. The genetic characterization of an increasing number of aerobic pathways for degradation of (substituted) aromatic compounds in different bacteria has made it possible to compare the similarities in genetic organization and in sequence which exist between genes and proteins of these specialized catabolic routes and more common pathways. These data suggest that discrete modules containing clusters of genes have been combined in different ways in the various catabolic pathways. Sequence information further suggests divergence of catabolic genes coding for specialized enzymes in the degradation of xenobiotic chemicals. An important question will be to find whether these specialized enzymes evolved from more common isozymes only after the introduction of xenobiotic chemicals into the environment. Evidence is presented that a range of genetic mechanisms, such as gene transfer, mutational drift, and genetic recombination and transposition, can accelerate the evolution of catabolic pathways in bacteria. However, there is virtually no information concerning the rates at which these mechanisms are operating in bacteria living in nature and the response of such rates to the presence of potential (xenobiotic) substrates. Quantitative data on the genetic processes in the natural environment and on the effect of environmental parameters on the rate of evolution are needed.

Adaptation, Biological↗

PubMed2004

Assessment of intra-species diversity among strains of Acinetobacter baumannii isolated from sites contaminated with petroleum hydrocarbons.

A total of 96 crude oil-degrading bacterial strains were isolated from 5 geographically diverse sites in India that were contaminated with different types of petroleum hydrocarbons. The strains were identified by sequencing the genes that encode for 16S rRNA. Out of the 96 isolates, 25 strains were identified as Acinetobacter baumannii and selected for the study. All of the selected strains could degrade the total petroleum hydrocarbon fractions of crude oil. These 25 strains were biochemically profiled and grouped into 8 phenovars on the basis of multivariate analysis of their substrate utilization profiles. PCR-based DNA fingerprinting was performed using intergenic repetitive DNA sequences, which divided the selected 25 strains into 7 specific genomic clusters. tRNA intergenic spacer length polymorphism was performed to determine the intra-species relatedness among these 25 strains. It delineated the strains into 8 genomic groups. The present study detected specific variants among the A. baumannii strains with differential degradation capacities for different fractions of crude oil. This could play a significant role in in situ bioremediation. The study also revealed the impact of environmental factors that cause intra-species diversity within the selected strains of A. baumannii.

Acinetobacter baumannii↗

PubMed2002

Methane and leachate pollutant emission potential from various fractions of municipal solid waste (MSW): effects of source separation and aerobic treatment.

The effects of source-separation of putrescibles as well as aerobic pre-treatment and landfill aeration on the pollutant emission potential of methane and leachate pollutants were studied in the fresh (PFMSW) and composted (CPFMSW) source-separated putrescible fraction of municipal solid waste, and in the grey waste, and in lysimeter landfilled grey waste and ten-year-old unsorted MSW from our landfill lysimeter study. After 0, 23 and 51 days, an aerobic lysimeter experiment, an elution test and biochemical methane potential (BMP) test was done on samples. PFMSW had high methane (CH4) potential (410 m(3) CH4 t(-1)TS) as well as a high amount of ammonium-nitrogen (3.6 kg NH4-N) was eluted, whereas CPFMSW produced 41 m(3) CH4 t(-1)TS and 2.0 kg NH4-N t(-1)TS. A high nitrogen elution potential was found in the grey waste (2.1 kg NH4-N t(-1)TS). Aeration for 51 days in lysimeters reduced CH4 potential by more than 68% for the PFMSW and CPFMSW samples, whereas for the lysimeter landfilled grey waste the reduction was 50% indicating the potential of aeration for CH4 emission reduction. The effective separation and biological treatment of the PFMSW are important in reducing the environmental impacts of waste management, especially for minimising the methane potential of MSW fractions.

Bacteria, Aerobic↗

PubMed2002

Process performance assessment of algae-based and duckweed-based wastewater treatment systems.

A pilot plant experiment was carried out to assess differences in environmental conditions and treatment performance in two systems for wastewater treatment: algae-based ponds (ABP) and duckweed-based (Lemna gibba) ponds (DBP). Each system consisted of a sequence of 4 equal ponds in series and was fed with a constant flow rate of partially treated wastewater from Birzeit University. Physico-chemical parameters and the removal of organic matter, nutrients and faecal coliforms were monitored within each treatment system over a period of 12 months. The results show clear differences in the environmental conditions. In ABP significantly (P>0.05) higher pH and DO values were observed than in DBP. DBP were more efficient in removal of organic matter (BOD and TSS) than ABP. The faecal coliform reduction was higher in ABP. However, the quality of the effluent from the third and fourth duckweed pond (total retention time of 21 and 28 days) did not exceed the WHO-criteria for unrestricted irrigation during both the summer and winter period, respectively. During the summer period, the average total nitrogen was reduced more in ABP (80%) than in DBP (55%). Lower values were measured during the winter period. Seasonal nitrogen reductions of the two systems were significantly different (P>0.05). In DBP, 33% and 15% of the total nitrogen was recovered into plant biomass and removed from the system via duckweed harvesting during the summer and winter period, respectively. This study showed that there were differences in the environmental conditions and treatment efficiencies between the two systems.

Biodegradation, Environmental↗

PubMed2005

The anaerobic treatment approach towards a more sustainable and robust environmental protection.

Anaerobic biological degradation processes (AnDe), when properly integrated with complementary biological and physical methods, constitute the ideal route to a sustainable protection of the life environment. However unfortunately for a smooth implementation of AnDe-processes drastic conceptual innovations are urgently needed in the field of environment protection; the present highly centralized approach in the public sanitation sector (CENSA) need to be substituted by a concept that focuses on optimal decentralization, problem prevention, self-sufficiency, resource recovery and reuse, with coupling to agriculture practices at or nearby the location (DESAR). Although a variety of excellent DESAR-based systems already are available and anaerobic digestion and treatment methods have found successful full-scale application for waste and wastewater treatment, there still is potential to improve these systems. Interesting questions to be elucidated are the effect of trace elements and macro-nutrients, the sludge immobilization phenomenon and the effect of environmental factors like temperature, pressure, mixing. Therefore tentatively a lot of challenging interdisciplinary research is waiting to attain further profitable innovations.

Agriculture↗

PubMed1998

A review of the environmental fate, effects, and exposures of bisphenol A.

Bisphenol A (CAS 85-05-7) may be released into the environment through its use and handling, and permitted discharges. BPA is moderately soluble (120 to 300 mg/L at pH 7), may adsorb to sediment (Koc 314 to 1524), has low volatility, and is not persistent based on its rapid biodegradation in acclimated wastewater treatment plants and receiving waters (half-lives 2.5 to 4 days). BPA is "slightly to moderately" toxic (algal EC50 of 1000 micrograms/L) and has low potential for bioaccumulation in aquatic organisms (BCFs 5 to 68). The chronic NOEC for Daphnia magna is > 3146 micrograms/L. Surface water concentrations are at least one to several orders of magnitude lower than chronic effects, with most levels nondetected.

Air Pollutants, Occupational↗