Evolution in tooth developmental biology: of morphology and molecules.
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Amino Acid Sequence↗
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Bird breeder's disease: a rare diagnosis in young children.
UNLABELLED: Bird breeder's lung disease is the most common form of hypersensitivity pneumonitis and is a rare entity in young children. We report three cases of children under 7 years of age in whom this diagnosis was confirmed early in the course of the disease. Three children aged 4.4 to 6.5 years presented with dry cough lasting for more than 1 month, dyspnoea, variable loss of appetite, weight loss, fatigue, fever and mild signs of respiratory distress. Chest X-ray films and CT scans showed a bilateral micronodular infiltrate. All three patients had strongly suggestive bronchoalveolar lavage fluid findings with lymphocytosis; two had elevated cell counts and decreased CD4/CD8 ratios. Lung biopsy confirmed the diagnosis in all children. Contact with allergens was identified in all children: two had spent holidays close to a farm in the previous month and one was living next to a pigeon house. In all children, avian precipitins were positive. The symptoms rapidly resolved after allergen avoidance and treatment with oral prednisone. Corticoid treatment was given between 11 and 15 weeks. One child relapsed and required long-term low-dose corticotherapy for 1 year. Lung function tests were normal in all three patients, 3.9 to 5.7 years after diagnosis. CONCLUSION: Bird breeder's lung disease is a rare entity but should be considered in young children presenting long lasting cough. While rapid allergen exclusion and start of treatment can avoid the evolution into irreversible lung fibrosis, clinical and biological evolution should be monitored carefully even after stopping corticoid treatment because of the possibility of relapse.
Animals↗
The powers and pitfalls of parsimony.
Parsimony analysis is a powerful tool for the study of biological evolution. It is used to construct phylogenetic trees, to evaluate alternative hypotheses objectively, and to study evolutionary pattern and process. Yet, as comparative data sets expand, the pitfalls of parsimony analysis are catching experts and novices alike.
Animals↗
[Experimental and histological analysis of histogenesis and tissue regeneration (some results of the 20th century and perspectives on further research)].
The article is devoted to theoretical analysis of certain achievements in the area of cellular and tissue biology. Evolutional laws of tissue development, theory of divergent differentiation of histological structures, conception of cellular-differon tissue organization, formulated earlier were completely suitable for analysis of processes of development and regeneration of living systems at different structural levels of organization. System-forming plasmalemmas, receptor-transductor and adaptive properties were related to most important characteristics of living systems that can be experimentally histologically analysed. Morphofunctional signs of differons and histions and tissue classifications were considered.
Adaptation, Physiological↗
[Gerontology and physico-chemical dietology].
The thermodynamic theory of biological evolution and aging of living beings makes it possible to propose the individual anti-aging diets on the basis of physical chemical estimations. In some cases it is possible to recommend the special drugs and dietary supplements against the different diseases too.
Aging↗
Prions: an evolutionary perspective.
Studies in both prion-due diseases in mammals and some non-Mendelian hereditary processes in yeasts have demonstrated that certain proteins are able to transmit structural information and self-replication. This induces the corresponding conformational changes in other proteins with identical or similar sequences. This ability of proteins may have been very useful during prebiotic chemical evolution, prior to the establishment of the genetic code. During this stage, proteins (proteinoids) must have molded and selected their structural folding units through direct interaction with the environment. The proteinoids that acquired the ability to propagate their conformations (which we refer to as conformons) would have acted as reservoirs and transmitters of a given structural information and hence could have acted as selectors for conformational changes. Despite the great advantage that arose from the establishment of the genetic code, the ability to propagate conformational changes did not necessarily disappear. Depending on the degree of involvement of this capacity in biological evolution, we propose two not mutually exclusive hypotheses: (i) extant prions could be an atavism of ancestral conformons, which would have co-evolved with cells, and (ii) the evolution of conformons would have produced cellular proteins, able to transmit structural information, and, in some cases, participating in certain processes of regulation and epigenesis. Therefore, prions could also be seen as conformons of a conventional infectious agent (or one that co-evolved with it independently) that, after a longer or shorter adaptive period, would have interacted with conformons from the host cells.
Biological Evolution↗
Eigen model as a quantum spin chain: exact dynamics.
We map the Eigen model of biological evolution [Naturwissenschaften 58, 465 (1971)] into a quantum spin model with non-Hermitian Hamiltonian. Based on such a connection, we derive exact relaxation periods for the Eigen model to approach static energy landscape from various initial conditions. We also study a simple case of dynamic fitness function.
Biological Evolution↗
Erasmus Darwin, Herbert Spencer, and the origins of the evolutionary worldview in British provincial scientific culture, 1770-1850.
The significance of Herbert Spencer's evolutionary philosophy has been generally recognized for over a century, as the familiarity of his phrase "survival of the fittest" indicates, yet accounts of the origins of his system still tend to follow too closely his own description, written many decades later. This essay argues that Spencer's own interpretation of his intellectual development gives an inadequate impression of the debt he owed to provincial scientific culture and its institutions. Most important, it shows that his evolutionism was originally stimulated by his association with the Derby philosophical community, for it was through this group--of which his father, who also appears to have espoused a deistic evolutionary theory, was a member--that he was first exposed to progressive Englightenment social and educational philosophies and to the evolutionary worldview of Erasmus Darwin, the first president of the Derby Philosophical Society. Darwin's scheme was the first to incorporate biological evolution, associationist psychology, evolutionary geology, and cosmological developmentalism. Spencer's own implicit denials of the link with Darwin are shown to be implausible in the face of Darwin's continuing influence on the Derby savants, the product of insecurity in his later years when he feared for his reputation as Lamarckism became increasingly untenable.
Biological Evolution↗
Emerging out of nature into history: the plurality of the sciences.
The idea of a 'theory of everything' is inconsistent with a natural feature of biological evolution: the spontaneous emergence of composite entities with completely new properties. At successively higher levels of complexity, from elementary particles and chemical molecules, through unicellular and multicellular organisms, to self-aware human beings and their cultural institutions, we find systems obeying entirely novel principles. The behaviour of such systems is not predictable from the properties of their constituents, so distinct 'languages' are required to describe them scientifically. The plurality of our sciences is thus an irreducible feature of the universe we live in. In particular, the reversible time coordinate of mathematical physics cannot cope with the natural 'path dependence' of biology. In the human sciences this extends into the imagined future as well as the remembered past. Furthermore, science nowadays usually arises in localized social contexts, where the 'logic of the situation' is continually being transformed by the emergence of cultural novelties such as unpredictable technological innovations. Thus, scientific knowledge cannot be restricted to generalized synchronic models, but involves historical narratives of specific events and unforeseen circumstances.
Adaptation, Physiological↗
[The information-energy concept of the origin of the psyche].
An attempt is made to understand the origin of psyche on the basis of natural sciences as a result of biological evolution. Organization and control of the artificial systems is based on purely informational, or formal interaction, while in the living organisms the basis is informational-energetic, or conceptual interaction. This type of interaction is the basis of self-organization of the living systems at all levels. It is suggested that the principle of self-organization is crucial for emergence of mind.
Animals↗
From monkey-like action recognition to human language: an evolutionary framework for neurolinguistics.
The article analyzes the neural and functional grounding of language skills as well as their emergence in hominid evolution, hypothesizing stages leading from abilities known to exist in monkeys and apes and presumed to exist in our hominid ancestors right through to modern spoken and signed languages. The starting point is the observation that both premotor area F5 in monkeys and Broca's area in humans contain a "mirror system" active for both execution and observation of manual actions, and that F5 and Broca's area are homologous brain regions. This grounded the mirror system hypothesis of Rizzolatti and Arbib (1998) which offers the mirror system for grasping as a key neural "missing link" between the abilities of our nonhuman ancestors of 20 million years ago and modern human language, with manual gestures rather than a system for vocal communication providing the initial seed for this evolutionary process. The present article, however, goes "beyond the mirror" to offer hypotheses on evolutionary changes within and outside the mirror systems which may have occurred to equip Homo sapiens with a language-ready brain. Crucial to the early stages of this progression is the mirror system for grasping and its extension to permit imitation. Imitation is seen as evolving via a so-called simple system such as that found in chimpanzees (which allows imitation of complex "object-oriented" sequences but only as the result of extensive practice) to a so-called complex system found in humans (which allows rapid imitation even of complex sequences, under appropriate conditions) which supports pantomime. This is hypothesized to have provided the substrate for the development of protosign, a combinatorially open repertoire of manual gestures, which then provides the scaffolding for the emergence of protospeech (which thus owes little to nonhuman vocalizations), with protosign and protospeech then developing in an expanding spiral. It is argued that these stages involve biological evolution of both brain and body. By contrast, it is argued that the progression from protosign and protospeech to languages with full-blown syntax and compositional semantics was a historical phenomenon in the development of Homo sapiens, involving few if any further biological changes.
Animal Communication↗
The role of microbial mats in the production of reduced gases on the early Earth.
The advent of oxygenic photosynthesis on Earth may have increased global biological productivity by a factor of 100-1,000 (ref. 1), profoundly affecting both geochemical and biological evolution. Much of this new productivity probably occurred in microbial mats, which incorporate a range of photosynthetic and anaerobic microorganisms in extremely close physical proximity. The potential contribution of these systems to global biogeochemical change would have depended on the nature of the interactions among these mat microorganisms. Here we report that in modern, cyanobacteria-dominated mats from hypersaline environments in Guerrero Negro, Mexico, photosynthetic microorganisms generate H2 and CO-gases that provide a basis for direct chemical interactions with neighbouring chemotrophic and heterotrophic microbes. We also observe an unexpected flux of CH4, which is probably related to H2-based alteration of the redox potential within the mats. These fluxes would have been most important during the nearly 2-billion-year period during which photosynthetic mats contributed substantially to biological productivity-and hence, to biogeochemistry-on Earth. In particular, the large fluxes of H2 that we observe could, with subsequent escape to space, represent a potentially important mechanism for oxidation of the primitive oceans and atmosphere.
Atmosphere↗
Dual nature of the genome: genes for the individual life and genes for the evolutionary progress of the population.
Biological evolution is here postulated to be driven coordinately by the products of specific evolution genes and by non-genetic elements such as the intrinsic properties of matter and random encounter with environmental factors. Evolution genes are supposed to have their own evolutionary history in which second-order selection was exerted at the population level. The products of evolution genes can act as generators of genetic variations and/or as modulators of the frequency of genetic variation. Three major natural strategies, each with a number of specific mechanisms contribute to the overall spontaneous production of genetic variants. Each of these three strategies contributes its own specific quality to genetic variation. The difficulties of experimentally investigating these strategies and a wider discussion of some of the postulates within the scientific community are outlined. Finally, the general relevance of the postulated duality of the genome for our world view is briefly mentioned.
Animals↗
[Phase transition in lipids and the problem of homoiothermia].
Why such a high stability of temperature is necessary for warm-blooded animals? Why the range of body temperatures of various warm-blooded species is several-fold narrower than the range of environmental temperatures? What were the physicochemical factors that determined such results of the biological evolution? A hypothesis presented in this short communication provides answers to these basic questions of the problem of homoiothermia. The hypothesis implies that the Ca(2+)-induced chain-ordering phase transition in the lipid component of synaptic membranes plays a key role at the last step of the mechanism of synaptic transmission, namely, the step of neurotransmitter release. The physicochemical substantiation of a possible molecular mechanism of the release involving the phase transition is presented, and the main kinetic and evolutionary issues of the mechanism are considered in brief.
Animals↗
Scientific meaning of meanings: quests for discoveries concerning our cultural ills.
This paper outlines pioneering concepts of fundamental physical and emotional features of the human brain which served as primary operators. These have developed during the past 10,000 years, giving rise to our present global megacultures and their various ancestral culture progenitors. Essential points are these: (1) Biological evolution endowed the human brain (quite inadvertently and unintentionally) with enormous latent powers for complex and sophisticated abstract ratiocinations. (2) Magnitudes of these latent powers grew exponentially with linear enlargements of brain size during the evolution of the genetic ancestors of Homo sapiens sapiens (Hss) during the past 3 million years, but these latent powers never materialized in utilized forms within the environmental contexts in which they evolved. (3) These sophisticated, abstract ratiocinations, both latent powers and operative forms in today's Hss brain, are divided between two major categories: utilitarian thinking and nonutilitarian thinking. (4) These two different types of thinking processes are carried out within separate, different regional combinations of neuronal biochemical entities within the same individual brain. (5) Sensitivities of abstract, sophisticated ratiocination processes within the human brain to influences from communication interactions with other human brains are exponentially greater in comparison with any other species of central nervous system in the earth's biosphere. This makes the brain population density the utmost critical factor, and determines the character of human thought within interacting populations of brains at a given time and place within a particular culture. (6) Abrupt increases of sedentary brain population densities, unnaturally greater by orders of magnitude than those that existed previously in biological evolutionary contexts, were engendered by the inauguration of agricultural practices 10,000 years ago. This enabled latent powers of the human brain used for complex and sophisticated abstract ratiocinations to become manifest in materialized forms of usage within relatively large groups of humans living i certain regions of the earth. (7) Thinking processes of the utilitarian category within brains living in such regions guided and dominated the development of sophisticated and complex social hierarchies and institutions, forms of communication, technologies, and cultures since that time. This dominating factor relegated thinking processes within the nonutilitarian categories of those brains to subservient roles during those developments. (8) Nonutilitarian abstracts ratiocinations possess a potential for proper adjudication and guidance of utilitarian abstract ratiocinations in the latter's development of culture. However, lack of the former's proper role in cultural developments since the beginning of the Holocene interglacial era has resulted in the imprisonment of Hss as aliens in an intellectual hell on a foreign planet.
Animals↗
Mind as a force field: comments on a new interactionistic hypothesis.
The survival and development of consciousness in biological evolution call for an explanation. An interactionistic mind-brain theory seems to have the greatest explanatory value in this context. An interpretation of an interactionistic hypothesis, recently proposed by Karl Popper, is discussed both theoretically and based on recent experimental data. In the interpretation, the distinction between the conscious mind and the brain is seen as a division into what is subjective and what is objective, and not as an ontological distinction between something immaterial and something material. The interactionistic hypothesis is based on similarities between minds and physical forces. The conscious mind is understood to interact with randomly spontaneous spatio-temporal patterns of action potentials through an electromagnetic field. Consequences and suggestions for future studies are discussed.
Action Potentials↗
Impacts and evolution: future prospects.
The discipline of astrobiology includes the dynamics of biological evolution. One of the major ways that the cosmos influences life is through the catastrophic environmental disruptions caused when comets and asteroids collide with a planet. We now recognize that such impacts have caused mass extinctions and played a major role in determining the evolution of life on Earth. The time-averaged impact flux as a function of projectile energy can be derived from lunar cratering statistics as well as the current population of near Earth asteroids (NEAs). Effects of impacts of various energies can be modeled, using data from historic impacts [such as the Cretaceous-Tertiary (KT) impactor 65 million years ago] and the observed 1994 bombardment of Jupiter by fragments of Comet Shoemaker-Levy 9. It is of particular interest to find from such models that the terrestrial environment is highly vulnerable to perturbation from impacts, so that even such a small event as the KT impact (by a projectile 10-15 km in diameter) can lead to a mass extinction. Similar considerations allow us to model the effects of still smaller (and much more likely) impacts, down to the size of the asteroid that exploded over Tunguska in 1908 (energy approximately 10 megatons). Combining the impact flux with estimates of environmental and ecological effects reveals that the greatest contemporary hazard is associated with impactors near 1 million megatons in energy (approximately 2 km in diameter for an asteroid). The current impact hazard is significant relative to other natural hazards, and arguments can be developed to illuminate a variety of public policy issues. The first priority in any plan for defense against impactors is to survey the population of Earth-crossing NEAs and project their orbits forward in time. This is the purpose of the Spaceguard Survey, which has already found more than half of the NEAs >1 km in diameter. If there is an NEA on a collision course with Earth, it can be discovered and the impact predicted with decades or more of warning. It is then possible to consider how to deflect or disrupt the NEA. Unlike other natural hazards, the impact risk can be largely eliminated, given sufficient advanced knowledge to take action against the threatening projectile.
Directed Molecular Evolution↗
Did dinosaurs have megakaryocytes? New ideas about platelets and their progenitors.
Biological evolution has struggled to produce mechanisms that can limit blood loss following injury. In humans and other mammals, control of blood loss (hemostasis) is achieved through a combination of plasma proteins, most of which are made in the liver, and platelets, anucleate blood cells that are produced in the bone marrow by megakaryocytes. Much has been learned about the underlying mechanisms, but much remains to be determined. The articles in this series review current ideas about the production of megakaryocytes from undifferentiated hematopoietic precursors, the steps by which megakaryocytes produce platelets, and the molecular mechanisms within platelets that make hemostasis possible. The underlying theme that connects the articles is the intense investigation of a complex system that keeps humans from bleeding to death, but at the same time exposes us to increased risk of thrombosis and vascular disease.
Animals↗