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At least 361 records · Page 20Linked to original sources
PubMed2005

Binding of harvested bacterial exopolymers to the surface of calcite.

Biologically produced exopolysaccharides (EPS) affect calcite dissolution and precipitation. In this study, natural alkaliphilic microbial isolates were collected from biofilms on historic limestone. The isolates were screened for their ability to produce significant quantities of EPS in cultures. The most productive isolates were identified by 16S rRNA sequence analysis as a close relative of Bacillus cereus. EPS with different chemical structures were harvested from the isolates. Isothermal titration calorimetry (ITC) was used to quantify the thermodynamics of binding by the harvested EPS to calcite. The binding was described by a Langmuir adsorption isotherm. Characterization of the EPS showed that binding strength to calcite depended on the chemical nature of the polymer.

Bacillus cereus↗
PubMed2001

An enzyme-based in situ hybridisation method for the identification of Streptococcus suis.

A method for enzyme-based in situ hybridisation of Streptococcus suis was developed. It enables the light microscopic localization of bacterial ribosomal RNA (rRNA) in formalin-fixed paraffin-embedded tissues. A unique sequence in the 16S rRNA of S. suis was targeted. Different pretreatment protocols were applied to facilitate probe penetration and multiple detection systems were tested. The results were compared to those obtained by immunohistochemistry. Pretreatment was necessary to obtain a signal by in situ hybridisation. The use of proteinase-K pretreatment was optimal regarding sensitivity and preservation of tissue morphology. A strong specific in situ hybridisation signal was achieved in tissue sections containing S. suis in microcolonies and the microanatomy of the surrounding tissue was easily assessed. However, the signal distribution differed from that found immunohistochemically and low-grade infection could not be detected by in situ hybridisation. These findings were interpreted as reflecting the physiological state of the bacteria. Thus, this method could prove useful in future studies of the infection pathogenesis.

Animals↗
PubMed1990

Transcriptional silencing and thermoregulation of gene expression in Escherichia coli.

Expression of specific adhesive properties by bacteria in general seems to be regulated to fit the environmental conditions. An example is the transcriptional regulation of digalactoside-specific binding by uropathogenic strains of Escherichia coli. The fimbrial structures (pili) on the bacterial surface carry the adhesin and are present during growth at 37 degrees C but are not produced by cells at lower temperatures, such as 25 degrees C. Thermoregulation of expression is due to temperature-dependent transcription of a regulatory cistron in the pilus-adhesin gene cluster. We have now identified and characterized a new regulatory locus (drdX) and show that a histone-like bacterial protein has an important role in this novel example of thermoregulation of transcription.

Adhesins, Bacterial↗
PubMedDate not supplied

SAR11 clade dominates ocean surface bacterioplankton communities.

The most abundant class of bacterial ribosomal RNA genes detected in seawater DNA by gene cloning belongs to SAR11-an alpha-proteobacterial clade. Other than indications of their prevalence in seawater, little is known about these organisms. Here we report quantitative measurements of the cellular abundance of the SAR11 clade in northwestern Sargasso Sea waters to 3,000 m and in Oregon coastal surface waters. On average, the SAR11 clade accounts for a third of the cells present in surface waters and nearly a fifth of the cells present in the mesopelagic zone. In some regions, members of the SAR11 clade represent as much as 50% of the total surface microbial community and 25% of the subeuphotic microbial community. By extrapolation, we estimate that globally there are 2.4 x 10(28) SAR11 cells in the oceans, half of which are located in the euphotic zone. Although the biogeochemical role of the SAR11 clade remains uncertain, these data support the conclusion that this microbial group is among the most successful organisms on Earth.

Alphaproteobacteria↗