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At least 379 records · Page 21Linked to original sources

PubMed2006

Assessing effects of stress across levels of biological organization using an aquatic ecosystem health index.

Multimetric approaches typically consider only one level of biological organization to assess the effects of environmental stressors on the health of aquatic ecosystems. The present study applied integrative star-plot analysis to evaluate effects of stressors over several levels of biological organization ranging from the sub-organism to the community level at study sites subjected to different levels of contaminant stress. An aquatic ecosystem health index (AEHI), based on the sum of all the star-plot areas over these levels of biological organization, was developed to reflect an integrative and holistic assessment of stressors on ecosystem health. Star-plot areas ranged from 1.96 at a reference site to 0.79-1.08 at sites located at increasing distances downstream from a pulp mill discharge. The values of the AEHI were positively correlated with the index of biotic integrity (IBI) scores (Pearson's r=0.824). The AEHI can be used to evaluate the overall health status of aquatic systems, to identify those levels of biological organization that have the greatest response to environmental stressors, and to help identify possible causes of observed effects. Results from this study suggest that the AEHI approach can avoid false-negative responses that can occur from assessing effects at only one level of biological organization.

Animals↗

PubMed2004

Modeling transport and deposition of contaminants to ecosystems of concern: a case study for the Laurentian Great Lakes.

Transfer efficiency (TE) is introduced as a model output that can be used to characterize the relative ability of chemicals to be transported in the environment and deposited to specific target ecosystems. We illustrate this concept by applying the Berkeley-Trent North American contaminant fate model (BETR North America) to identify organic chemicals with properties that result in efficient atmospheric transport and deposition to the Laurentian Great Lakes. By systematically applying the model to hypothetical organic chemicals that span a wide range of environmental partitioning properties, we identify combinations of properties that favor efficient transport and deposition to the Lakes. Five classes of chemicals are identified based on dominant transport and deposition pathways, and specific examples of chemicals in each class are identified and discussed. The role of vegetation in scavenging chemicals from the atmosphere is assessed, and found to have a negligible influence on transfer efficiency to the Great Lakes. Results indicate chemicals with octanol-water (K(ow)) and air-water (K(aw)) partition coefficients in the range of 10(5)-10(7) and 10(-4)-10(-1) combine efficient transport and deposition to the Great Lakes with potential for biaccumulation in the aquatic food web once they are deposited. A method of estimating the time scale for atmospheric transport and deposition process is suggested, and the effects of degrading reactions in the atmosphere and meteorological conditions on transport efficiency of different classes of chemicals are discussed. In total, this approach provides a method of identifying chemicals that are subject to long-range transport and deposition to specific target ecosystems as a result of their partitioning and persistence characteristics. Supported by an appropriate contaminant fate model, the approach can be applied to any target ecosystem of concern.

Air Pollutants↗

PubMed2004

In situ and laboratory bioassays to evaluate the impact of effluent discharges on receiving aquatic ecosystems.

Effluents are a main source of direct and often continuous input of pollutants into aquatic ecosystems with long-term implications on ecosystem functioning. Therefore, the study of the effects of effluent exposure on organisms, populations or communities within the framework of impact assessment has a high ecological relevance. The aim of this study was to assess the toxicological impact of two effluents, one household wastewater treatment effluent (Effluent 1) and one industrial effluent (Effluent 2), on the receiving aquatic ecosystem using two test species under both in situ and laboratory conditions. Zebra mussel (Dreissena polymorpha) and common carp (Cyprinus carpio) were exposed under laboratory conditions in an online monitoring flow-through system (receiving different concentrations of Effluent 2) and under in situ conditions along the pollution gradient established by these two effluent discharges. Bioassays focussed on growth and condition related endpoints (i.e. condition, growth, lipid budget), since these are key functional processes within organisms and populations. Under laboratory conditions, increasing concentrations of the industrial effluent (Effluent 2) had a negative effect on both zebra mussel and carp energy reserves and condition. Under in situ conditions, the same negative impact of Effluent 2 was observed for zebra mussels, while Effluent 1 had no apparent effect on exposed zebra mussels. Carp growth and condition, on the other hand, were significantly increased at the discharge sites of both effluents when compared to the reference site, probably due to differences in food availability. The results indicate that a combination of in situ and laboratory exposures can illustrate how ecological processes influence bioassay studies. The incorporation of indirect, ecological effects, like changes in food availability, provides considerable benefit in understanding and predicting effects of effluents on selected species under realistic exposure conditions.

Animals↗

PubMed2004

Bacterial diversity and ecosystem function of filamentous microbial mats from aphotic (cave) sulfidic springs dominated by chemolithoautotrophic "Epsilonproteobacteria".

Filamentous microbial mats from three aphotic sulfidic springs in Lower Kane Cave, Wyoming, were assessed with regard to bacterial diversity, community structure, and ecosystem function using a 16S rDNA-based phylogenetic approach combined with elemental content and stable carbon isotope ratio analyses. The most prevalent mat morphotype consisted of white filament bundles, with low C:N ratios (3.5-5.4) and high sulfur content (16.1-51.2%). White filament bundles and two other mat morphotypes had organic carbon isotope values (mean delta13C=-34.7 per thousand, 1sigma=3.6) consistent with chemolithoautotrophic carbon fixation from a dissolved inorganic carbon reservoir (cave water, mean delta13C=-7.4 per thousand for two springs, n=8). Bacterial diversity was low overall in the clone libraries, and the most abundant taxonomic group was affiliated with the "Epsilonproteobacteria" (68%), with other bacterial sequences affiliated with Gammaproteobacteria (12.2%), Betaproteobacteria (11.7%), Deltaproteobacteria (0.8%), and the Acidobacterium (5.6%) and Bacteriodetes/Chlorobi (1.7%) divisions. Six distinct epsilonproteobacterial taxonomic groups were identified from the microbial mats. Epsilonproteobacterial and bacterial group abundances and community structure shifted from the spring orifices downstream, corresponding to changes in dissolved sulfide and oxygen concentrations and metabolic requirements of certain bacterial groups. Most of the clone sequences for epsilonproteobacterial groups were retrieved from areas with high sulfide and low oxygen concentrations, whereas Thiothrix spp. and Thiobacillus spp. had higher retrieved clone abundances where conditions of low sulfide and high oxygen concentrations were measured. Genetic and metabolic diversity among the "Epsilonproteobacteria" maximizes overall cave ecosystem function, and these organisms play a significant role in providing chemolithoautotrophic energy to the otherwise nutrient-poor cave habitat. Our results demonstrate that sulfur cycling supports subsurface ecosystems through chemolithoautotrophy and expand the evolutionary and ecological views of "Epsilonproteobacteria" in terrestrial habitats.

Biodiversity↗

PubMed2005

Phylogeny of Proteobacteria and Bacteroidetes from oxic habitats of a tidal flat ecosystem.

Bacteria of the phyla Proteobacteria and Bacteroidetes are known to be the most prominent heterotrophic organisms in marine surface waters. In order to investigate the occurrence of these phyla in a coastal environment, the tidal flat ecosystem German Wadden Sea, we analyzed a clone library of PCR-amplified and sequenced 16S rRNA gene fragments and isolated 46 new strains affiliated with these phyla from the water column with various polymers and complex media as substrates. The phylogenetic affiliation of these strains was analyzed on the basis of sequenced 16S rRNA gene fragments. Subsequently, a comprehensive phylogenetic analysis of Proteobacteria and Bacteroidetes including available sequences from oxic habitats of earlier studies of this ecosystem was performed. Sequences of the earlier studies were derived from isolation approaches and from denaturing gradient gel electrophoresis (DGGE) analyses of environmental samples and high dilution steps of MPN (most probable number) cultures. The majority of the 265 sequences included in this analysis affiliated with alpha-Proteobacteria (45.3%), gamma-Proteobacteria (31.7%), and Bacteroidetes (16.2%). Almost 7% belong to the delta-Proteobacteria and several of these clones affiliated with the Myxococcales, a group comprising obligate aerobic organisms. Within the alpha- and gamma-Proteobacteria specific clusters were identified including isolates from high dilution steps of dilution cultures and/or clones from the clone library or DGGE gels, implying a high abundance of some of these organisms. Within the gamma-Proteobacteria a new cluster is proposed, which consists of marine surface-attached organisms. This SAMMIC (Surface Attached Marine MICrobes) cluster comprises only uncultured phylotypes and exhibits a global distribution. Overall, the analysis indicates that Proteobacteria and Bacteroidetes of the Wadden Sea have a surprisingly high diversity, presumably a result of the signature of this ecosystem as a melting pot at the land-sea interface and comprising a great habitat variety.

Bacteroidetes↗

PubMed2004

Emergence of community structure in terrestrial mammal-dominated ecosystems.

We present a paper that combines empirical and theoretical research about the trophic organization of biological communities. Some regularities are observed in the analysis of the relationship between the trophic structure (how the species are distributed among a set of feeding groups) of a number of African large mammal communities and the type of ecosystem. Different types of ecosystems are characterized by specific patterns in the trophic structure of the mammal community. In order to explain the origin of these patterns, we propose a model defining the underlying dynamic of mammal-dominated ecosystems. The main aim of this study is to show that it is possible to obtain a dynamic explanation of those patterns. The model is shown to spontaneously define different types of structures in community organization, related to those observed. We propose a model that could help to explain the correlation between different environmental factors and the abundance or diversity of herbivores, and which establishes a general mechanism that makes it possible to understand how some rules constrain the assembly of the communities. In addition, the proposed model leads us to see how biological communities can operate in an integrated way, which allows for the acceptance of their changes on large time-scales as evolutionary. In summary, we suggest that communities are unitary structures with coherent properties that result from the self-organizing dynamic of the whole system.

Animals↗

PubMed2006

Sustainable ecosystem management using optimal control theory: part 2 (stochastic systems).

Sustainable development of ecosystems through external ecosystem management is assuming importance for the environmentalists. To that effect, previous work by the authors looked at the option of manipulating population dynamics of the species in an ecosystem to achieve sustainability. Fisher information is used as the quantifying measure of sustainability and optimal control theory is used to derive the control profiles. However, that work considered only deterministic systems. Uncertainty being prevalent in all systems, particularly in natural systems, this paper extends that work to analyse uncertain systems. Predator-prey models are used to model the species populations and different control philosophies are compared. Ito mean reverting process is used to model the stochastic process, and stochastic maximum principle is used to derive the control profiles. The results for the objective of FI variance minimization qualitatively agree with those for the deterministic system, while the results for the FI maximization objective differ. It is observed that the instability associated with the FI maximization objective for deterministic systems is absorbed by the noise introduced by the uncertainty. Quantitatively, it is observed that the degree of uncertainty, along with its presence, is also important to identify the most appropriate management strategy.

Animals↗

PubMed2005

Field data analysis and application of a complex water column biogeochemical model in different areas of a semi-enclosed basin: towards the development of an ecosystem management tool.

The Pagasitikos gulf ecosystem is studied through the analysis of experimental field data acquired during several monitoring projects and the application of a complex biogeochemical model. The gulf was separated into three different parts (internal, top central-external, bottom central-external) according to the patterns exhibited by the key ecosystem indicators. Unlike other semi-enclosed gulfs Pagasitikos can be characterised as meso-oligotrophic undergoing periods of P or N limitation. Although the signal of nutrient inputs is not very clear in the field data, their importance is assessed through simulation. Increased phosphate concentrations either due to mixing or due to anthropogenic activities can result in phytoplanktonic blooms with significant contribution by diatoms. The effect of hydrodynamic patterns on primary production has been demonstrated through ecosystem modeling indicating that due to long stratification periods, all nutrients released through the benthic regeneration are trapped in the deeper layers, developing a microbial food web. However when the thermocline erodes nutrients find their way up in the upper layers of the euphotic zone and the system turns into more classical type with primary producers growing significantly faster.

Animals↗

PubMed2006

Compound response of marine and terrestrial ecosystems to varying climate: pre-anthropogenic perspective from bivalve shell growth increments and tree-rings.

Annual growth increments were examined from shells of the ocean quahog (Arctica islandica L.) from northwest Norway and from tree-ring samples of the Scots pine (Pinus sylvestris L.) from nearby coastal areas. The reconstructed annual growth increments were used to compare growth variability in marine and terrestrial ecosystems. Spatiotemporal comparison of the growth records showed statistically significant correlation during the 19th century A.D., indicative of ecosystem-independent response to pre-anthropogenic climate variations. Geographical correlation between marine and terrestrial records was only observed at the local scale. Years with particularly low winter or high summer North Atlantic Oscillation (NAO) indices showed the best synchronization of marine and terrestrial growth. Despite strong correlation during historical time, our palaeoecological evidence suggests that marine and terrestrial ecosystems may show dissimilar growth reaction to recently observed positive winter-NAO phases.

Animals↗

PubMed2004

Assessment of variables controlling nitrate dynamics in groundwater: is it a threat to surface aquatic ecosystems?

The impact of fertilised cropping on nitrate-N dynamics in groundwater (GW) was assessed in a catchment from piezometers installed: (i) to different depths, (ii) in different soil types, (iii) on different positions on landscape, and (iv) compared with the Australian and New Zealand Environmental and Conservation Council guideline values provided for different aquatic ecosystems. The GW and NO(3)-N concentration dynamics were monitored in 39 piezometer wells, installed to 5-90 m depth, under fertilized sugarcane (Saccharum officinarum-S) in the Johnstone River Catchment, Australia, from 1999 January through September 2002. The median nitrate-N concentration ranged from 14 to 1511 microg L(-1), and the 80th percentile from 0 to 1341 microg L(-1). In 34 out of the 39 piezometer wells the 80th percentile or 80% of the nitrate-N values were higher than 30 microg L(-1), which is the maximum trigger value provided in the ANZECC table for sustainable health of different aquatic ecosystems. Nitrate-N concentration decreased with increasing well depth, increasing depth of water in wells, and with decreasing relief on landscape. Nitrate-N was higher in alluvial soil profiles than on those formed in-situ. Nitrate-N increased with increasing rainfall at the beginning of the rainy season, fluctuated during the peak rainy period, and then decreased when the rain ceased. The rapid decrease in GW after the rains ceased suggested potential existed for nitrate-N to be discharged as lateral-flow into streams. This may contribute towards the deterioration in the health of down-stream aquatic ecosystems.

Ecosystem↗

PubMed2006

Re-infection of wildlife populations with rinderpest virus on the periphery of the Somali ecosystem in East Africa.

We report surveillance for rinderpest virus in wildlife populations in three major ecosystems of East Africa: Great Rift Valley, Somali and Tsavo from 1994 to 2003. Three hundred and eighty wild animals were sampled for detection of rinderpest virus, antigen or genome and 1133 sampled for antibody in sera from Kenya, Uganda, Ethiopia and Tanzania from 20 species. This was done modifying for wildlife the internationally recommended standards for rinderpest investigation and diagnosis in livestock. The animals were selected according to susceptibility and preference given to gregarious species, and populations were selected according to abundance, availability and association with livestock. Rinderpest virus, antigen and/or genome were detected in Kenya; within Tsavo, Nairobi and Meru National Parks. Serological results from 864 animals (of which 65% were buffalo) from the region were selected as unequivocal; showing the temporal and spatial aspects of past epidemics. Recent infection has been only in or peripheral to the Somali ecosystem (in Kenya). Our evidence supports the hypothesis that wildlife is not important in the long-term maintenance of rinderpest and that wildlife are infected sporadically most likely from a cattle source, although this needs to be proven in the Somali ecosystem. Wildlife will continue to be a key to monitoring the remaining virus circulation in Africa.

Africa, Eastern↗

PubMed2006

Mercury distribution in two Sierran forest and one desert sagebrush steppe ecosystems and the effects of fire.

Mercury (Hg) concentration, reservoir mass, and Hg reservoir size were determined for vegetation components, litter, and mineral soil for two Sierran forest sites and one desert sagebrush steppe site. Mercury was found to be held primarily in the mineral soil (maximum depth of 60 to 100 cm), which contained more than 90% of the total ecosystem reservoir. However, Hg in foliage, bark, and litter plays a more dominant role in Hg cycling than the mineral soil. Mercury partitioning into ecosystem components at the Sierran forest sites was similar to that observed for other US forest sites. Vegetation and litter Hg reservoirs were significantly smaller in the sagebrush steppe system because of lower biomass. Data collected from these ecosystems after wildfire and prescribed burns showed a significant decrease in the Hg pool from certain reservoirs. No loss from mineral soil was observed for the study areas but data from fire severity points suggested that Hg in the upper few millimeters of surface soil may be volatilized due to exposure to elevated temperatures. Comparison of data from burned and unburned plots suggested that the only significant source of atmospheric Hg from the prescribed burn was combustion of litter. Differences in unburned versus burned Hg reservoirs at the forest wildfire site demonstrated that drastic reduction in the litter and above ground live biomass Hg reservoirs after burning had occurred. Sagebrush and litter were absent in the burned plots after a wildfire suggesting that both reservoirs were released during the fire. Mercury emissions due to fire from the forest prescribed burn, forest wildfire, and sagebrush steppe wildfire sites were roughly estimated at 2.0 to 5.1, 2.2 to 4.9, and 0.36+/-0.13 g ha(-1), respectively, with litter and vegetation being the most important sources.

Altitude↗

PubMed2006

Lead contamination of an old shooting range affecting the local ecosystem--A case study with a holistic approach.

The aim of this case study was to uncover the consequences of lead pellet-derived heavy lead contamination at a cast-off shooting range in southern Finland, covering aspects from soil chemistry and biology up to ecosystem level. The observed changes in the soil properties of the most contaminated areas suggest that the contamination may be disturbing processes of decomposition and nutrient mineralisation. Also two functionally important groups of soil organisms, microbes (as analysed using the PLFA analysis) and enchytraeid worms, were negatively affected by the contamination. Furthermore, there was an indication of reduced pine litter production at the contaminated areas. On the other hand, lead contamination appears not to have affected pine growth or soil-dwelling nematodes and microarthropods, and the general outlook of the whole ecosystem is that of a healthy forest. Thus, the boreal forest ecosystem studied as a whole appears to bear strong resistance to contamination, despite negative effects of lead on many of its components. This resistance may result from e.g. low bioavailability of lead, avoidance of the most contaminated soil horizons and microsites by the organisms, and functional redundancy and development of lead-tolerant populations amongst the organisms. The relative importance of these factors and the mechanisms behind them will be investigated in forthcoming studies.

Animals↗

PubMed2026

Multicellular ecosystems: Linking cellular diversity to tissue function and disease.

Tissue function emerges from coordinated interactions among diverse cell populations, whereas disruption of these interactions can lead to dysfunction. Recent advances in single-cell and spatial genomics have not only cataloged cellular diversity but also revealed how tissues are organized as dynamic multicellular ecosystems. Moving beyond descriptive cell atlases toward functional, system-level representations represents a major frontier in tissue biology. In this review, we outline conceptual and methodological frameworks for dissecting multicellular coordination, highlight recurrent multicellular ecosystems across physiological and pathological contexts, and explore translational opportunities such as patient stratification, therapeutic reprogramming, and regenerative strategies. Viewing tissues through an ecosystem lens provides a unifying framework that links cellular diversity to emergent tissue function and informs strategies for disease intervention.

Humans↗

PubMed2006

Long-term evolution of an ecosystem with spontaneous periodicity of mass extinctions.

Twenty years ago, after analysing palaeontological data, Raup and Sepkoski suggested that mass extinctions on Earth appear cyclically in time with a period of approximately 26 million years (My). To explain the 26My period, a number of proposals were made involving, e.g., astronomical effects, increased volcanic activity, or the Earth's magnetic field reversal, none of which, however, has been confirmed. Here we study a spatially extended discrete model of an ecosystem and show that the periodicity of mass extinctions might be a natural feature of the ecosystem's dynamics and not the result of a periodic external perturbation. In our model, periodic changes of the diversity of an ecosystem and some of its other characteristics are induced by the coevolution of species. In agreement with some palaeontological data, our results show that the longevity of a species depends on the evolutionary stage at which the species is created. Possible further tests of our model are also discussed.

Animals↗

PubMed2006

Is a healthy ecosystem one that is rich in parasites?

Historically, the role of parasites in ecosystem functioning has been considered trivial because a cursory examination reveals that their relative biomass is low compared with that of other trophic groups. However there is increasing evidence that parasite-mediated effects could be significant: they shape host population dynamics, alter interspecific competition, influence energy flow and appear to be important drivers of biodiversity. Indeed they influence a range of ecosystem functions and have a major effect on the structure of some food webs. Here, we consider the bottom-up and top-down processes of how parasitism influences ecosystem functioning and show that there is evidence that parasites are important for biodiversity and production; thus, we consider a healthy system to be one that is rich in parasite species.

Animals↗

PubMed2003

Impacts of the Nakhodka heavy-oil spill on an intertidal ecosystem: an approach to impact evaluation using geographical information system.

A major heavy-oil spill from the Russian tanker Nakhodka occurred in the Sea of Japan on 2 January 1997. We investigated the impacts of this spill on a rocky intertidal ecosystem along the southern coast of the Sea of Japan. We selected Imago-Ura Cove as our study site to observe temporal changes along the oiled shore, because minimal cleaning effort was made in this area. Field surveys were conducted every autumn and spring from 1997 to 2000. We measured coverage by macroalgae in 1 x 1-m(2) quadrats and counted the animals in 5 x 5-m(2) quadrats along the intertidal zone. Changes in the ecosystem caused by the oil spill were analyzed by applying a geographical information system (GIS) to the Sea of Japan for the first time. The GIS showed that following the accident there were heavily oiled areas in sheltered regions, but these decreased over the three years. It also showed that coverage by macroalgae and the number of animals increased, although some species of algae with microscopic sporophyte generations, and some populations of perennial shellfish, remained stable or decreased during the study period. GIS was able to trace temporal changes in intertidal communities resulting from the impacts of heavy oil on flora and fauna at a spatial scale of 10-100 m. GIS is thus a practical tool for visualizing, analyzing, and monitoring changes in an ecosystem polluted by oil, taking into account topographic differences along the coastline.

Accidents↗

PubMed1999

Ecosystem health and human well being: the mission of the international programme on plant bioassays.

In a broad sense, since humans are ultimately a part of the ecosystem, we may conclude that ecosystem health encompasses human health. A preventative measure that detects the environmental hazards that infringe on human health should be established on a global scale. Plant bioassays, which are most sensitive in detecting genotoxicity of environmental agents, can serve as the first alert for the presence of environmental hazards in water, air, and soil-the essential elements of life. Three plant bioassays including the Allium/Vicia root test, the Tradescantia-Stamen-Hair-Mutation and Tradescantia-Micronucleus tests, which have been validated by the International Programme on Chemical Safety (IPCS), were selected to serve this purpose. The major activity of the International Programme on Plant Bioassays (IPPB) which was formerly sponsored by the IPCS has been devoted to the monitoring and testing of the genotoxicity of environmental pollutants using these three bioassays since 1996 after the hands-on workshop conducted in Qingdao, China. The general aim of this programme was not only to identify the substance and situations that may entail a significant risk to humans as proposed by ICPEMC and IAEMS but also by using these single, quick, and inexpensive plant bioassays to demonstrate the effects of pollution and to carry on environmental education to the general public at an early age. The monitoring network in China could be used as the model for a global scale study to aid in restoring ecosystem health. The Chinese policy is to identify the hazards and to eliminate the sources of pollution.

Biological Assay↗