PubMed Health⌕ Search

SEARCH · PubMed Health

Results for “Extinction, Biological”

Explore indexed PubMed citations for clinical trials, systematic reviews and public health research. Read source abstracts and follow each citation to its original PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 451 records · Page 25Linked to original sources
PubMed2003

Disease propagation in connected host populations with density-dependent dynamics: the case of the Feline Leukemia Virus.

Spatial heterogeneity is a strong determinant of host-parasite relationships, however local-scale mechanisms are often not elucidated. Generally speaking, in many circumstances dispersal is expected to increase disease persistence. We consider the case when host populations show density-dependent dynamics and are connected through the dispersal of individuals. Taking the domestic cats (Felis catus)--Feline Leukemia Virus (FeLV) as a toy model of host-microparasite system, we predict the disease dynamics when two host populations with distinct or similar structures are connected together and to the surrounding environment by dispersal. Our model brings qualitatively different predictions from one-population models. First, as expected, biologically realistic rates of dispersal may allow FeLV to persist in sets of populations where the virus would have gone extinct otherwise, but a reverse outcome is also possible: eradication of FeLV from a small population by connexion to a larger population where it is not persistent. Second, overall prevalence as well as depression of host population size due to infection are both enhanced by dispersal, even at low dispersal rates when disease persistence is not achieved in the two populations. This unexpected prediction is probably due to the combination of dispersal with density-dependent population dynamics. Third, the dispersal of non-infectious cats has more influence on virus prevalence than the dispersal of infectious. Finally, prevalence and depression of host population size are both related to the rate of dispersion, to the health status of individuals dispersing and to the dynamics of host populations.

Animals↗
PubMed2005

CD28 extinction in human T cells: altered functions and the program of T-cell senescence.

The loss of CD28 expression on T cells is the most consistent biological indicator of aging in the human immune system, and the frequency of CD28(null) T cells is a key predictor of immune incompetence in the elderly. There is also mounting evidence for the high frequency of these unusual T cells among patients with inflammatory syndromes or with chronic infections disproportionate with their age. In these pathological states, CD28(null) T cells likely represent prematurely senescent lymphocytes due to persistent immune activation. Unlike the situation in CD28 gene knockout mice that have anergic CD28(0/0) T cells, human CD28(null) T cells are functionally active, long-lived, oligoclonal lymphocytes that lack or have limited proliferative capacity. Results of replicative senescence studies show that CD28(null) T cells are derived from CD28(+) precursors that have undergone repeated stimulation, indicating that CD28 silencing underlies the program of T-cell aging. Dissection of the machinery regulating CD28 expression is paving the way in elucidating the molecular events leading to immune senescence as well as providing clues into the functional rejuvenation of senescent T cells.

Animals↗
PubMed2004

The modern theory of biological evolution: an expanded synthesis.

In 1858, two naturalists, Charles Darwin and Alfred Russel Wallace, independently proposed natural selection as the basic mechanism responsible for the origin of new phenotypic variants and, ultimately, new species. A large body of evidence for this hypothesis was published in Darwin's Origin of Species one year later, the appearance of which provoked other leading scientists like August Weismann to adopt and amplify Darwin's perspective. Weismann's neo-Darwinian theory of evolution was further elaborated, most notably in a series of books by Theodosius Dobzhansky, Ernst Mayr, Julian Huxley and others. In this article we first summarize the history of life on Earth and provide recent evidence demonstrating that Darwin's dilemma (the apparent missing Precambrian record of life) has been resolved. Next, the historical development and structure of the "modern synthesis" is described within the context of the following topics: paleobiology and rates of evolution, mass extinctions and species selection, macroevolution and punctuated equilibrium, sexual reproduction and recombination, sexual selection and altruism, endosymbiosis and eukaryotic cell evolution, evolutionary developmental biology, phenotypic plasticity, epigenetic inheritance and molecular evolution, experimental bacterial evolution, and computer simulations (in silico evolution of digital organisms). In addition, we discuss the expansion of the modern synthesis, embracing all branches of scientific disciplines. It is concluded that the basic tenets of the synthetic theory have survived, but in modified form. These sub-theories require continued elaboration, particularly in light of molecular biology, to answer open-ended questions concerning the mechanisms of evolution in all five kingdoms of life.

Animals↗
PubMed1990

Fluorescent probes for cancer detection.

Several new fluorescent dyes, derivatives of pyrene and of coumarin, were synthesized that have excitation and emission wavelength maxima considerably red-shifted as compared to most pyrene and coumarin compounds. These new fluorescent compounds have high extinction coefficients and high quantum yields, and they also are very environmentally sensitive, which makes them good probes of biological systems. Several of these fluorescent compounds are preferentially taken up and retained by leukemic and other cancer tissue cell lines as compared to normals, particularly 1,3-dihydroxy 6,8-pyrenedisodiumsulfonate and 3-(carboxymethylester)-7-julolidinocoumarin. These compounds may have some usefulness in cancer detection.

Evaluation Studies as Topic↗
PubMed2000

Climate extremes: observations, modeling, and impacts.

One of the major concerns with a potential change in climate is that an increase in extreme events will occur. Results of observational studies suggest that in many areas that have been analyzed, changes in total precipitation are amplified at the tails, and changes in some temperature extremes have been observed. Model output has been analyzed that shows changes in extreme events for future climates, such as increases in extreme high temperatures, decreases in extreme low temperatures, and increases in intense precipitation events. In addition, the societal infrastructure is becoming more sensitive to weather and climate extremes, which would be exacerbated by climate change. In wild plants and animals, climate-induced extinctions, distributional and phenological changes, and species' range shifts are being documented at an increasing rate. Several apparently gradual biological changes are linked to responses to extreme weather and climate events.

Animals↗
PubMed2006

A stochastic population dynamics model for Aedes aegypti: formulation and application to a city with temperate climate.

Aedes aegypti is the main vector for dengue and urban yellow fever. It is extended around the world not only in the tropical regions but also beyond them, reaching temperate climates. Because of its importance as a vector of deadly diseases, the significance of its distribution in urban areas and the possibility of breeding in laboratory facilities, Aedes aegypti is one of the best-known mosquitoes. In this work the biology of Aedes aegypti is incorporated into the framework of a stochastic population dynamics model able to handle seasonal and total extinction as well as endemic situations. The model incorporates explicitly the dependence with temperature. The ecological parameters of the model are tuned to the present populations of Aedes aegypti in Buenos Aires city, which is at the border of the present day geographical distribution in South America. Temperature thresholds for the mosquito survival are computed as a function of average yearly temperature and seasonal variation as well as breeding site availability. The stochastic analysis suggests that the southern limit of Aedes aegypti distribution in South America is close to the 15 degrees C average yearly isotherm, which accounts for the historical and current distribution better than the traditional criterion of the winter (July) 10 degrees C isotherm.

Aedes↗
PubMed2000

The evolution of parasite virulence and transmission rate in a spatially structured population.

If the transmission occurs through local contact of the individuals in a spatially structured population, the evolutionarily stable (ESS) traits of parasite might be quite different from what the classical theory with complete mixing predicts. In this paper, we theoretically study the ESS virulence and transmission rate of a parasite in a lattice-structured host population, in which the host can send progeny only to its neighboring vacant site, and the transmission occurs only in between the infected and the susceptible in the nearest-neighbor sites. Infected host is assumed to be infertile. The analysis based on the pair approximation and the Monte Carlo simulation reveal that the ESS transmission rate and virulence in a lattice-structured population are greatly reduced from those in completely mixing population. Unlike completely mixing populations, the spread of parasite can drive the host to extinction, because the local density of the susceptible next to the infected can remain high even when the global density of host becomes very low. This demographic viscosity and group selection between self-organized spatial clusters of host individuals then leads to an intermediate ESS transmission rate even if there is no tradeoff between transmission rate and virulence. The ESS transmission rate is below the region of parasite-driven extinction by a finite amount for moderately large reproductive rate of host; whereas, the evolution of transmission rate leads to the fade out of parasite for small reproductive rate, and the extinction of host for very large reproductive rate.

Animals↗
PubMed2002

Non-equilibria in small metapopulations: comparing the deterministic Levins model with its stochastic counterpart.

In this paper, we examine, for small metapopulations, the stochastic analog of the classical Levins metapopulation model. We study its basic model output, the expected time to metapopulation extinction, for systems which are brought out of equilibrium by imposing sudden changes in patch number and the colonization and extinction parameters. We find that the expected metapopulation extinction time shows different behavior from the relaxation time of the original, deterministic, Levins model. This relaxation time is therefore limited in value for predicting the behavior of the stochastic model. However, predictions about the extinction time for deterministically unviable cases remain qualitatively the same. Our results further suggest that, if we want to counteract the effects of habitat loss or increased dispersal resistance, the optimal conservation strategy is not to restore the original situation, that is, to create habitat or decrease resistance against dispersal. As long as the costs for different management options are not too dissimilar, it is better to improve the quality of the remaining habitat in order to decrease the local extinction rate.

Animals↗
PubMed1992

Disease transmission models with density-dependent demographics.

The models considered for the spread of an infectious disease in a population are of SIRS or SIS type with a standard incidence expression. The varying population size is described by a modification of the logistic differential equation which includes a term for disease-related deaths. The models have density-dependent restricted growth due to a decreasing birth rate and an increasing death rate as the population size increases towards its carrying capacity. Thresholds, equilibria and stability are determined for the systems of ordinary differential equations for each model. The persistence of the infectious disease and disease-related deaths can lead to a new equilibrium population size below the carrying capacity and can even cause the population to become extinct.

Animals↗
PubMed1993

Extinction and viruses.

The micropaleontological record of deep-sea sediments is demonstrably continuous through time and, therefore, it can be used to study in detail the evolutionary process. Several taxa, including Coccolithophorida, planktic Foraminifera, Radiolaria, and diatoms, are abundantly represented. Some species, apparently evolved in the marginal marine environment, appear suddenly in the record while other species grade into different ones at rates that range from 100,000 years to millions of years. The rates are usually different for different morphological characters within the same lineage. Every few million years a mass extinction occurs--the disappearance of a number of taxa apparently caused by an environmental upset of some kind. These events are used by stratigraphers to subdivide geologic time. Interspersed between mass extinctions are the background extinctions, the individual extinctions of well-established species while the sympatric species exhibit no sign of stress. It is hypothesized that background extinctions are caused by host-specific viral action. It is further hypothesized that background extinctions are a fundamental component of the process of evolution.

Animals↗
PubMed2006

Natural hybridization in primates: one evolutionary mechanism.

The role and importance of natural hybridization in the evolutionary histories of animal taxa is still debated. This results largely from a history of zoological investigations that assumed, rather than documented, a limited evolutionary role for this process. However, it is now becoming apparent that, just as for plants, the creative effects of reticulate evolution are widespread in animal taxa as well. This conclusion is supported by the documentation of numerous instances of the formation of new taxa and the genetic enrichment through introgressive hybridization. In the present review, we use primates as a paradigm for how natural hybridization can affect the evolution of species complexes and remains a footprint on genomes. Findings for a number of groups, including basal (e.g. lemurs) and derived (e.g. Old World apes) lineages, demonstrate that introgression and hybrid speciation have caused a reticulate pattern that is still detectable in the, often mosaic, genomes of primates. For example, results from genetic analyses of our own species demonstrate the process of past introgressive hybridization with the progenitors of our sister taxa (i.e. chimpanzees and gorillas) and most likely also our extinct, close relatives in the hominid lineage.

Animals↗
PubMed2004

Food-web interactions govern the resistance of communities after non-random extinctions.

Growing concern about how loss of biodiversity will affect ecosystems has stimulated numerous studies. Although most studies have assumed that species go extinct randomly, species often go extinct in order of their sensitivity to a stress that intensifies through time (such as climate change). Here we show that the consequences of random and ordered extinctions differ. Both depend on food-web interactions that create compensation; that is, the increase of some species when their competitors and/or predators decrease in density due to environmental stress. Compensation makes communities as a whole more resistant to stress by reducing changes in combined species densities. As extinctions progress, the potential for compensation is depleted, and communities become progressively less resistant. For ordered extinctions, however, this depletion is offset and communities retain their resistance, because the surviving species have greater average resistance to the stress. Despite extinctions being ordered, changes in the food web with successive extinctions make it difficult to predict which species will show compensation in the future. This unpredictability argues for 'whole-ecosystem' approaches to biodiversity conservation, as seemingly insignificant species may become important after other species go extinct.

Animals↗