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[The concept of space in infectious disease epidemiology]

This article analyzes how space is employed in infectious disease epidemiology, with a brief retrospective of the various definitions of space and its implications. Emphasis is given to the theory of natural foci of infectious diseases formulated by Pavlovsky and the interactions of epidemiology and geography.The current problem posed by emerging infections is seen as a determinant of the need for further discussion on the concept of space in infectious disease epidemiology.

Journal Article↗

Japan's contribution to research on infectious disease.

We explored the degree of Japan's contribution to research in the field of infectious disease in the last decade. Articles published from 1991-2000 in highly reputed journals on infectious disease were accessed through the MEDLINE database. The number of articles having an affiliation with a Japanese institution was counted in total and for the respective journals. The proportions of randomized controlled trials (RCTs), case-control/cohort studies, and case reports among the articles affiliated with Japan were also calculated, and were compared with the overall proportions of these types of articles for all articles published in these journals. Japan's contribution to research on infectious disease was 3.4% of the total articles and ranked sixth among all countries. The recent trend in contribution was negative, although not statistically significant (P = 0.19). RCTs in total articles published in these journals were 3.9%, which proportion has been increasing significantly over time. On the other hand, only one RCT (0.2%) was reported from Japan in the last decade. In addition, the proportion of case-control/cohort studies (2.2%) was smaller for articles from Japan than those from other countries. Compared with those of other developed countries, Japan's contribution to research on infectious disease has been unsatisfactory in the last decade. An explanation for this phenomenon should be determined and remedial measures should be taken forthwith.

Communicable Diseases↗

[Scientific production in infectious diseases in Spain (1991-2001): position within the European Union].

INTRODUCTION: Medical research in our geographic area has undergone significant changes over the last three decades. The objective of this study was to quantitatively determine Spain's medical research output published in the journals included in the Infectious Diseases section of the Journal Citation Reports, and to compare it with that of other European Union (EU) countries. METHODS: The PubMed Web site (MEDLINE) was used to retrieve medical articles published by authors from Spain and other EU countries from 1991 to 2001 in 36 infectious disease journals included in the Infectious Diseases section of the Journal Citation Reports. RESULTS: We retrieved a total of 17,899 documents published by EU authors during the study period. Authors from Spanish institutions contributed 1,340 documents, 7.5% of the overall EU production. Spain ranked in the sixth position of the EU by number of papers. It remained in the same position after adjusting for gross national product and dropped to the ninth position after correcting for population. The number of articles published increased from 72 in the biennium 1991-1992 to 442 in the biennium 2000-2001. Spanish production rose by 514%, as compared with a median increase of 149% in the other EU countries. Spain was the first producer of articles from the EU in four journals: Diagnostic Microbiology and Infectious Disease (27.6%), European Journal of Clinical Microbiology & Infectious Diseases (24.8%), American Journal of Infection Control (21.8%) and Microbial Drug Resistance (17.5%). CONCLUSIONS: Spanish scientific production in infectious diseases has increased substantially in the period 1991-2001.

Bibliometrics↗

Time series analysis of surveillance data of infectious diseases in Japan.

Temporal variational structures of long-term trends, recursive variations and seasonal variations were investigated, as to the incidence data of infectious diseases obtained from Infectious Diseases Surveillance Program in Japan by a newly devised procedure of time series analysis. In this procedure, three-dimensional spectral array indicates temporal variations of periodic structures of the incidence data, and is useful for investigating the long-term trend of the incidence data. Dominant spectral lines of the whole incidence data for each disease were assigned as the linear combinations of the fundamental modes. The optimum least squares fitting curve calculated with the fundamental modes essentially reproduces the recursive variation of the incidence data and an extension of the curve could be used to predict the incidence of the disease. Seasonal periodic modes of the incidences were estimated. The infectious diseases were classified into three basic groups (measles-, chickenpox- and mumps-patterns) and others, according to the resemblance of temporal variational structures of the incidence data.

Communicable Diseases↗

[The organization of dispensary observation for persons with a history of infectious diseases in Afghanistan].

Outpatient control over the patients who went through infectious diseases in Afghanistan is determined by a structure of the dominant nosological forms of infectious diseases: typhoid, paratyphoid, intestinal amebiasis and other acute intestinal infections, viral hepatitis, malaria. A considerable number of servicemen who went through infectious diseases had led to a re-enforcement of "infections service" inside the organic structure of the 40th Army, as well as to elaboration of a rational system of outpatient control, including regular medical examinations by organic physicians, and infectionists, laboratory, functional and instrumental methods of examination by organic medical units and specialized health care establishments and sanitary-epidemiological units.

Afghanistan↗

Infectious diseases in the workplace: pointers for an ethical management policy.

Infectious diseases in the workplace can present difficult dilemmas for employers, who must balance the rights of infected employees against obligations to protect other employees from infection. Anti-discrimination legislation imposes additional obligations on employers to ensure that any steps taken in response to the risk of infectious disease do not amount to unlawful discrimination against employees who may be disease carriers. This paper analyses the operation of anti-discrimination in this context and points to ways in which employers can formulate an infectious diseases policy that is both ethically and legally defensible.

Acquired Immunodeficiency Syndrome↗

Design and analysis issues in cluster-randomized trials of interventions against infectious diseases.

This paper discusses the application of the cluster-randomized trial (CRT) design to evaluate the effectiveness of interventions against infectious diseases. In addition to the usual rationale for this design, there are a number of other advantages that are peculiar to the study of infectious diseases. In particular, CRTs are able to measure the overall effect of an intervention at the population level, capturing both the direct effect of an intervention on an individual's susceptibility to infection, and also the indirect effects due to changes in risks of transmission to other individuals, or to the mass effect or 'herd immunity' resulting from intervening in a large proportion of the population. We briefly review published CRTs of interventions against infectious diseases, most of which have been conducted in the developing countries where such diseases predominate. The focus is on trials in which communities or other large groupings are randomized, and in which impacts on infectious disease incidence or mortality are assessed. We then discuss three issues that are of special relevance to CRTs of infectious diseases. First, issues relating to the definition and size of clusters; secondly, the role of matching or stratification, and the choice of matching factors; and thirdly, the definition of direct and indirect effects of intervention, and methods of assessing these components in a CRT. We conclude by outlining some areas for future research.

Biometry↗

Cytokine and cytokine receptor polymorphisms in infectious disease.

Host immune responses strongly control the outcome of infectious disease, and the resistance to bacterial infections in humans is in part genetically determined. Responses to Gram-negative bacterial endotoxin are affected by the concentration of plasma lipoproteins and lipid transport proteins that are genetically controlled. Alterations of plasma lipid profiles by genetic manipulation in mice indeed strongly modify resistance to bacterial infections. Recently, the TLR-4 receptor has been identified as the endotoxin receptor, and TLR-4 mutations are the cause of endotoxin resistance in mice. It is probable that such defects also exist in humans, although they must be rare. The capacity of monocytes to produce TNFalpha varies more than tenfold, and several polymorphisms within the TNFalpha gene have been associated with increased TNFalpha production and increased mortality of sepsis. However, these associations most likely result from linkage disequilibrium with other immune response genes on chromosome 6. Polymorphisms within the IL-1beta and the IL-1RA genes (located on chromosome 2) are associated with altered protein production rates, and certain haplotypes have been linked to inflammatory disease (no studies in bacterial infectious disease have been published). Mutations in the receptors for IL-12 and IFNgamma, both critical for clearance of intracellular infectious pathogens, occur in consanguineous populations and are associated with severe recurrent infections with Salmonella species and mycobacteria. In conclusion, no human cytokine deficiency syndromes are known, and it remains uncertain whether genetically determined differences in the production rate of pro-inflammatory cytokines alter the outcome of sepsis. In contrast, mutations in the IL-12 and IFNgamma receptor (and possibly the endotoxin receptor) genes are associated with recurrent bacterial infections, whereas TNFR1 mutations cause fever of unknown origin.

Animals↗

[Global strategies in prevention of infectious diseases on the turn of the second and third millennium: expectation versus reality].

Prevention has been the greatest success in the field of infectious diseases. Control of infectious diseases is being challenged by many factors, like standards of living, human behaviour, mass population movements, emergence of infectious like HIV/AIDS and SARS, the re-emergence of infections such as tuberculosis, development of resistance in bacteria, viruses and parasites, modern rate of global travel, etc. Although great advances have been made, a considerable burden of morbidity and mortality from infectious diseases remains globally. The aim of any control program can be defined by three levels--containment, elimination and eradication. Prevention methods are many aspects, including introduction of prevention guidelines, low cost interventions, vector control, surveillance, and vaccination, etc.

Bacterial Infections↗

The genomics and genetics of human infectious disease susceptibility.

A genetic basis for interindividual variation in susceptibility to human infectious diseases has been indicated by twin, adoptee, pedigree, and candidate gene studies. This has led to the identification of a small number of strong genetic associations with common variants for malaria, HIV infection, and infectious prion diseases. Numerous other genes have shown less strong associations with these and some other infectious diseases, such as tuberculosis, leprosy, and persistent hepatitis viral infections. Many immunogenetic loci influence susceptibility to several infectious pathogens. Recent genetic linkage analyses of measures of infection as well as of infectious disease, including some genome-wide scans, have found convincing evidence of genetic linkage to chromosomal regions wherein susceptibility genes have yet to be identified. These studies indicate a highly polygenic basis for susceptibility to many common infectious diseases, with some emerging examples of interaction between variants of specific polymorphic host and pathogen genes.

Communicable Diseases↗

Heart disease among children with HIV/AIDS attending the paediatric infectious disease clinic at Mulago Hospital.

BACKGROUND: There are very few published studies of heart disease in HIV infected children living in sub-Saharan Africa, a region with more than 50% of the world's population of HIV infected patients. OBJECTIVES: To determine the prevalence, and describe the type and clinical presentation of heart disease among children with HIV attending an ambulatory clinic. METHODOLOGY: Two hundred and thirty (230) HIV infected children attending the Paediatric Infectious Disease Clinic at Mulago hospital were recruited by simple random sampling in a cross-sectional study. The children were evaluated clinically, and investigated by electrocardiography and echocardiography. RESULTS: Thirty-two children (13.9%) had asymptomatic HIV disease, 156 (67.8%) had AIDS related complex while 42 (18.3%) had AIDS. Heart abnormalities were detected in 51% of the children (40.0% by echocardiography alone and 26.5% by electrocardiography alone). Heart abnormalities were most prevalent in children with AIDS (76.2%) and least prevalent in children with asymptomatic HIV disease (25.0%). The abnormalities included; Sinus tachycardia (21%), left ventricular systolic dysfunction (17%), right ventricular dilatation (14%), congenital heart disease (4.8%), dilated cardiomyopathy (3.0%), pericarditis (2.2%) and cor pulmonale (1.3%). Children with left ventricular systolic dysfunction significantly had easy fatigability, dyspnoea on exertion and tachypnoea. Other heart abnormalities presented with non-specific clinical features. CONCLUSION: Heart abnormalities were common especially in children with symptomatic HIV disease and included sinus tachycardia, left ventricular systolic dysfunction and right ventricular dilatation. The detected heart abnormalities, except left ventricular systolic dysfunction, had non-specific clinical features.

Adolescent↗

Invasive candidiasis: comparison of management choices by infectious disease and critical care specialists.

OBJECTIVE: To compare the management of invasive candidiasis between infectious disease and critical care specialists. DESIGN AND SETTING: Clinical case scenarios of invasive candidiasis were presented during interactive sessions at national specialty meetings. Participants responded to questions using an anonymous electronic voting system. PATIENTS AND PARTICIPANTS: Sixty-five infectious disease and 51 critical care physicians in Switzerland. RESULTS: Critical care specialists were more likely to ask advice from a colleague with expertise in the field of fungal infections to treat Candida glabrata (19.5% vs. 3.5%) and C. krusei (36.4% vs. 3.3%) candidemia. Most participants reported that they would change or remove a central venous catheter in the presence of candidemia, but 77.1% of critical care specialists would start concomitant antifungal treatment, compared to only 50% of infectious disease specialists. Similarly, more critical care specialists would start antifungal prophylaxis when Candida spp. are isolated from the peritoneal fluid at time of surgery for peritonitis resulting from bowel perforation (22.2% vs. 7.2%). The two groups equally considered Candida spp. as pathogens in tertiary peritonitis, but critical care specialists would more frequently use amphotericin B than fluconazole, caspofungin, or voriconazole. In mechanically ventilated patients the isolation of 10(4) Candida spp. from a bronchoalveolar lavage was considered a colonizing organism by 94.9% of infectious disease, compared to 46.8% of critical care specialists, with a marked difference in the use of antifungal agents (5.1% vs. 51%). CONCLUSIONS: These data highlight differences between management approaches for candidiasis in two groups of specialists, particularly in the reported use of antifungals.

Aged↗

The impact of comparative genomics on infectious disease research.

The past decade has witnessed a revolution in infectious disease research, fuelled by the accumulation of a huge amount of DNA sequence data. The avalanche of genome sequence information has largely promoted the development of comparative genomics, which exploits available genome sequences to perform either inter- or intra-species comparisons of bacterial genome contents, or performs comparisons between the human genome and those of other organisms. This review aims to summarize how comparative genomics is being extensively used in infectious disease research, such as in the studies to identify virulence determinants, antimicrobial drug targets, vaccine candidates and new markers for diagnostics. These applications hold considerable promise for alleviating the burden of infectious diseases in the coming years.

Bacteria↗

Influence of an infectious disease service on antibiotic prescription behavior and selection of multiresistant pathogens.

BACKGROUND: A routine infectious disease service was established in January 1998 in order to optimize the antibiotic usage and prescription pattern of a neurologic intensive care unit (NICU). METHODS: Treatment guidelines for the most prevalent infections were implemented and individual antibiotic regimes were discussed at the bedside with infectious disease experts. RESULTS: This interdisciplinary cooperation reduced the total number of antibiotics prescribed by 38.1%, from 7,789 in 1997 to 4,822 in 1998, without compromising patient outcomes (mortality rate: 22/313 patients in 1997 vs. 32/328 patients in 1998). Total patient days (2,254 days vs. 2,296 days) and average length of stay in the NICU (7.2 days vs. 7.0 days) were comparable. Antimicrobial expenditure decreased by 44.8% (71,680 Euros in 1997 vs 39,567 Euros in 1998). Taking into account the costs for the infectious disease service (approximately 8,000 Euros in 1998), a total saving of 24,113 Euros was made. The dramatic reduction in antibiotic usage (mainly of carbapenems) resulted in a statistically significant decreased isolation of Stenotrophomonas maltophilia (p<0.05), Enterobacter cloacae (p<0.05), multiresistant Pseudomonas aeruginosa (p<0.05) and Candida spp. (p<0.05), without any change in the infection control guidelines. CONCLUSION: These data show that an infectious disease service can optimize and reduce antibiotic usage. This results in a decrease in the occurence of multiresistant gram-negative pathogens and Candida spp. in intensive care units and, at the same time, saves costs.

Anti-Bacterial Agents↗

Surveillance system of infectious diseases in Japan.

The surveillance system of infectious disease in Japan started in 1981 and has been providing useful epidemiological information on 27 communicable diseases. The system consists of medical institutions (fixed monitoring stations), institutions of hygienic sciences, health centers, local governments and the ministry of health and welfare. There are two types of information about infectious diseases. One is clinical reports of incidence cases from medical institutions, and the other is laboratory information about etiologic agents. Between health centers, local governments and the department of statistics and information in the ministry of health and welfare, information is transmitted through the on-line network. Collected information is analyzed and submitted by both local and central committees of analysis. From the epidemiological point of view, quality control of the data and integration of other sources of data would be the next goal of the system.

Databases, Factual↗

The nature of an infectious disease practice in a community hospital.

Populations of patients in community and university-affiliated teaching hospitals differ, and therefore, problems encountered by infectious disease specialists in these two types of hospitals also differ. However, most infectious disease specialists are trained only in university hospitals. In order to characterize the nature of an infectious disease practice in a community hospital, the authors report data for the patients seen during a period of three years (July 1978-June 1981). Most of the 1,238 cases were referred by other physicians. General practitioners referred 35% of the cases, whereas internists, orthopedists, and surgeons referred 20%, 16%, and 10% respectively. Skin and wound infections accounted for the largest percentage of referrals (16%). Fever accounted for 9%, abdominal problems for 6%, and respiratory infections for 6%. Other problems referred to the infectious disease service included infections of the central nervous system, urinary tract infections, osteomyelitis, and arthritis.

Abdomen↗

Social and environmental risk factors in the emergence of infectious diseases.

Fifty years ago, the age-old scourge of infectious disease was receding in the developed world in response to improved public health measures, while the advent of antibiotics, better vaccines, insecticides and improved surveillance held the promise of eradicating residual problems. By the late twentieth century, however, an increase in the emergence and re-emergence of infectious diseases was evident in many parts of the world. This upturn looms as the fourth major transition in human-microbe relationships since the advent of agriculture around 10,000 years ago. About 30 new diseases have been identified, including Legionnaires' disease, human immunodeficiency virus (HIV)/acquired immune deficiency syndrome (AIDS), hepatitis C, bovine spongiform encephalopathy (BSE)/variant Creutzfeldt-Jakob disease (vCJD), Nipah virus, several viral hemorrhagic fevers and, most recently, severe acute respiratory syndrome (SARS) and avian influenza. The emergence of these diseases, and resurgence of old ones like tuberculosis and cholera, reflects various changes in human ecology: rural-to-urban migration resulting in high-density peri-urban slums; increasing long-distance mobility and trade; the social disruption of war and conflict; changes in personal behavior; and, increasingly, human-induced global changes, including widespread forest clearance and climate change. Political ignorance, denial and obduracy (as with HIV/AIDS) further compound the risks. The use and misuse of medical technology also pose risks, such as drug-resistant microbes and contaminated equipment or biological medicines. A better understanding of the evolving social dynamics of emerging infectious diseases ought to help us to anticipate and hopefully ameliorate current and future risks.

Cardiovascular Diseases↗