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Metabolic pathways of the fossil dinosaur bones. Part I. Vascular communication system.

The fossil dinosaur bones over 80 million years old were studied. Samples for examination were prepared with specially elaborated methods. Observations in the light and scanning electron microscope yielded images of the spatial distribution of vascular canals. Besides, the contents of these canals were isolated; the contents fully corresponded to the vascular network in dinosaur bones under study, this permitted the morphological assessment of the vascular system. In the dinosaur bone, independently of its type, i.e. whether it was primitive e.g. plexiform, or Haversian , two blood inflow tracts were distinguished: the main, primary tract running from the marrow cavity, and the secondary tract departing from the periosteum. Examinations made with the use of an X-ray microanalyzer corroborated the essential importance of the tract running from the marrow cavity, revealing the presence of the same material (iron) in the wall of the marrow cavity and in the vascular canals closely connected with this part of the cavity. The bone was found to contain the axial vascular canals, whose course was parallel to the long axis of the bone, and the anastomosing canals perpendicular to them and thereby to the long axis of the bone. The system of the interlinked canals of the two types bounded the bone mass into a prism. The osseous space restricted by these canals was defined as the functional bone area, undoubtedly functionally subject to the control of the surrounding vessels. The spatial system of the functional bone areas was more orderly and these areas were markedly smaller in the primitive, plexiform bone than in the Haversian bone.(ABSTRACT TRUNCATED AT 250 WORDS)

Animals↗

The joints of the evolving foot. Part III. The fossil evidence.

The fossil record supports the conclusions derived from the study of extant species that the Primates evolved a unique suite of characters in the articulations of the foot. The tarsal bones of African Miocene apes show specializations characteristic of hominoid evolution and provide reasonable precursors for the morphology of Pan, Gorilla and even Pongo. The OH8 foot is essentially ape-like in it major features, with many close resemblances to Pan. Although fairly clearly from a bipedal primate, it lacked important functional specializations found in the human foot.

Adaptation, Biological↗

[Blood groups of human fossil remains].

The results of the blood grouping of the fossil human bones, from different mesolyte necropoles, are presented. These results, giving the informations concerning biological individualities of the ancestors of our country, will be of great importance for anthropology and ethnology of this region.

Adolescent↗

Protopithecus: rediscovering the first fossil primate.

The earliest discoveries of extinct primates and humans profoundly affected the course of evolutionary theory as a scientific model for explaining life and its diversity through time. The absence of such fossils in the early nineteenth century provided important negative evidence to the competing French intellectual schools of Lamarckian evolutionism and Cuvierian catastrophism. Indeed, the first recognition of extinct primates fell serendipitously between the death of Cuvier in 1832 and the revolutionary writings of Darwin in 1859. Largely unknown to history, however, is that four different European scholars, working on three continents, independently discovered and recognized extinct primates within a few months of each other in 1836. The first of these to be formally named, Protopithecus, is ironically the least well known despite being the largest monkey ever discovered in the western hemisphere. The reasons for this forgotten first discovery reflect a general unawareness of South American mammals, and propagation of misinterpretation at a critical time in the history of primatology.

Animals↗

[Re-analysis of DNA sequence data from a dinosaur egg fossil unearthed in Xixia of Henan Province].

To identify the real source of two putative dinosaur 18S rDNA sequences of DA18S1 and DA18S7 cloned from a dinosaur egg fossil unearthed in Xixia of Henan Province, China, sequence homology searching was performed on the INTERNET by programs of the BLAST server and FASTA server. Neither of the two sequences was found to be similar with prokaryotic sequences. The base identity between DA18S7 with several plant 18S rDNA sequences is among 89.0-92.4%, much higher than that with 18S rDNAs of other organisms. DA18S1 has larger similarities with fungal, invertebrate and plant 18S rDNAs than with the vertebrate sequences. Molecular phylogeny analysis of DA18S1 indicated that DA18S1 clusters with fungal 18S rDNAs. These results show that DA18S1 and DA18S7 are of fungal and plant origin, respectively.

Animals↗

Regional variation in tooth size and pathology in fossil hominids.

Tooth size and dental pathology in fossil hominids were studied to test for regional differences in these parameters. The results showed little regional variation in tooth size for the Middle and Upper Pleistocene sites compared (except for Krapina) but considerable differences in the severity of attrition and dental pathology. These differences were considered indicative of regional differences in the functional load borne by the teeth, and in view of the similar technological status of the groups studied, were attributed to environmental differences in the diet. Since, in all regions, reduction in tooth size appeared to continue at the same rate for the periods investigated, no association can be established between presumed selective pressures related to differences in functional demands made on the dentition, and tooth reduction.

Adult↗

Faunal assemblage seriation of southern African Pliocene and Pleistocene fossil deposits.

Fossil assemblages from the Pliocene and Pleistocene of southern Africa were seriated in order to give a better idea of their relative chronology. Time-sensitive mammals were selected for calculation of the Faunal Resemblance Index among 17 site units. On the basis of a logistical seriation and subsequent site analysis, the following sequence of sites was deemed most probable: Makapansgat Member 3, Makapansgat Member 4, Taung Dart deposits, Sterkfontein Member 4 and Taung Hrdlicka deposits, Sterkfontein Member 5 (in part) and Kromdraai B, Kromdraai A and Swartkrans Member 1, Swartkrans Member 2, Swartkrans Member 3, Plovers Lake, Cornelia, Elandsfontein Main Site, Cave of Hearths Acheulian levels, Florisbad and Equus Cave and Klasies River Mouth.

Africa, Southern↗

Nucleic acid-binding metabolic enzymes: living fossils of stereochemical interactions?

Recently, a series of intriguing observations expanded the list of a number of metabolic enzymes known to be associated with various forms of nucleic acids, including single- and double-stranded DNA, cognate and noncognate RNAs, and specific tRNAs. There is no clear reason why such a phenomenon should take place in contemporary cell physiology, or, further, why such a property has evolved at all. Sixteen known cases are presented in an attempt to delineate any common features of these enzymes. Apart from their ancient nature, as judged by their wide distribution and their participation in fundamental biochemical pathways, it appears that these enzymes do not share any structural or functional characteristics. Given that most of these proteins require nucleotide-based cofactors for their activity, it is proposed that they may represent genuine molecular fossils of the transition from an RNA to a protein world. Their nucleic acid-binding properties are in keeping with previously proposed hypotheses regarding the origins and evolution of nucleotide-based cofactors. The mode of interaction between these proteins and their nucleic acid substrates remains unclear, but it may represent an extended form of stereochemical interactions that have been proposed for the origins of the genetic code.

Animals↗

Genetic code origin: are the pathways of type Glu-tRNA(Gln) --> Gln-tRNA(Gln) molecular fossils or not?

A logical-evolutionary analysis is conducted to clarify whether or not pathways of type Glu-tRNA(Gln) --> Gln-tRNA(Gln) are molecular fossils of the mechanism that gave rise to the evolutionary organization of the genetic code. The result of this analysis is that these pathways are most likely a manifestation of this mechanism. This provides strong evidence in favor of the coevolution theory of genetic code origin, as this theory is based on the amino acid biosynthetic transformation taking place on tRNA-like molecules which imprinted the genetic code structuring. Comments on the different interpretations of these pathways found in the literature are also provided.

Evolution, Molecular↗

Energetics and torpor of a South American "living fossil", the microbiotheriid Dromiciops gliroides.

We examined the energetics of the living fossil microbiotheriid Dromiciops gliroides, a nocturnal and rare small marsupial, endemic to the northern portion of the temperate forest of southern South America. We investigated the effects of changes at ambient temperature and food restriction on the energetics and patterns of torpor. We determined whether they exhibit shallow daily torpor or deep prolonged torpor like some Australian marsupials. Thermal conductance was 92.5% of the expected value for a similarly sized eutherian and basal metabolic rate was 82.9 and 58.6% of the predicted value for standard metatherians and eutherians, respectively. Euthermic D. gliroides showed daily fluctuations in body temperature, being significantly higher during the night. Dromiciops gliroides entered torpor and aroused spontaneously. The duration of torpor bouts increased in response to decreasing ambient temperature; torpor bout duration ranged from 10 h at 20 degrees C to 120 h at 12.5 degrees C. This study is the first record of deep torpor or hibernation for a South American mammal. Torpor in this species as well as in marsupials in general appears to be an opportunistic response to unpredictable biotic and abiotic conditions.

Adaptation, Physiological↗

Cytogenetic studies on Metasequoia glyptostroboides, a living fossil species.

The chromosome morphology and meiotic pairing behavior in the pollen mother cells (PMCs) of Metasequoia glyptostroboides were investigated. The results showed that: (1) The chromosome number of the PMCs was 2n = 22. (2) The PMCs developed in the successive manner, and the nucleoids in the dynamic development were similar to those of the other gymnosperms. (3) At prophase, most of the chromosomes were unable to be identified distinctively because the chromosomes were long and tangled together. The chromosome segments were paired non-synchronously. At pachytene, the interstitial or terminal regions of some bivalents did not form synapsis and the paired chromosomes showed difference in sizes, indicating that there were structure differences between the homologous chromosomes. (4) At diakinesis, the ring bivalents showed complicated configurations due to the differences in location and number of chiasmata. In addition, there were cross-linked bivalents. (5) At metaphase I, the chromosome configuration of each cell was 8.2II(0) + 1.1II + 1.3II+ + 0.8I. Most of the chromosomes were ring bivalents, but some were cross-linked bivalents, rod bivalents, or univalents. (6) 15% PMCs at anaphase I and 22% PMCs at anaphase II presented chromosome bridges, chromosome fragments, micronuclei, and lagging chromosomes. Twenty seven percent microspores finally moved into one to three micronuclei. Twenty five percent pollens were abortive. The results indicated that the observed individual of M. glyptostroboides was probably a paracentric inversion heterozygote, and there were structural and behavioral differences between the homologous chromosomes. The chromosomal aberration of M. glyptostroboides may play an important role in the evolution of this relict species, which is known as a living fossil. Further evidence is needed to test whether the differences between homologous chromosomes were due to hybridization.

Chromosome Inversion↗

Molecular phylogeny of acantharian and polycystine radiolarians based on ribosomal DNA sequences, and some comparisons with data from the fossil record.

Polycystines (spumellarians, nassellarians, and collodarians), phaeodarians, and acantharians are marine planktonic protists that have been conventionally and collectively called "radiolaria". Recent molecular phylogenetic studies revealed radiolarian polyphyly with phaeodarians being a separate offshoot. Collodarians and nassellarians are also shown to form a monophyletic group, but other aspects of radiolarian phylogeny, such as interrelations among polycystines and acantharians, remained uncertain. Here, we present molecular phylogenetic analyses including new ribosomal RNA sequences from ten spumellarians and nine nassellarians, based on Bayesian and maximum-likelihood methods. Results indicate that the Polycystinea is a paraphyletic group, with Bayesian analysis suggesting that spumellarians form a clade with acantharians. The heliozoan-like protist Sticholonche appears as a sister to the spumellarian clade. The nassellarian Eucyrtidium is located outside the clade including the other nassellarians and collodarians. The mineralogy of the test of extant radiolarians and the tree topology obtained in this work suggest that acantharians and spumellarians evolved from an ancestor with a siliceous skeleton. Collodarians and nassellarians form a well-supported clade and one might infer from the fossil record that they may have diverged between the Jurassic and the Eocene.

Animals↗

Fossil woods from the Late Cretaceous Aachen Formation.

Silicified fossil woods from the Late Cretaceous (Santonian) Aachen Formation of northeast Belgium, southernmost Netherlands and adjacent Germany were investigated. Gymnosperms dominate this assemblage: Taxodioxylon gypsaceum, T. cf. gypsaceum, T. cf. albertense (all Taxodiaceae), Dammaroxylon aachenense sp. nov. (Araucariaceae), Pinuxylon sp. (Pinaceae), and Scalaroxylon sp. (Cycad or Cycadeoid). Angiosperms are minor constituents: Nyssoxylon sp. (Nyssaceae?, Cornaceae?), Mastixioxylon symplocoides sp. nov. (Mastixiaceae?, Symplocaceae?), Plataninium decipiens (Platanaceae) and Paraphyllanthoxylon cf. marylandense (Anacardiaceae?, Burseraceae?, Lauraceae?).The composition of this assemblage and the anatomy of the woods indicate a seasonal and humid warm-temperate to subtropical climate.

Journal Article↗

Re-assignment of the Affinities of the Fossil Pollen Type Tricolpites trioblatus Mildenhall and Pocknall to Wilsonia (Convolvulaceae) and a reassessment of the ecological interpretations.

Tricolpites trioblatus Mildenhall and Pocknall was described from Upper Miocene-Pliocene sediments of New Zealand and attributed to the Hebe complex (Scrophulariaceae), which is common in the New Zealand vegetation, especially in montane and subalpine habitats. Pollen in Miocene-Pliocene sediments in central Australia is identified with T. trioblatus, and the depositional situations included shallow lakes, with fresh or brackish waters, sometimes becoming saline. The affinities of T. trioblatus are re-examined in the light of these disparate environments in Australia and New Zealand. It has been found that all the fossil grains examined are more comparable to pollen of Wilsonia, and perhaps Cressa (Convolvulaceae), than to those of the Hebe complex. Wilsonia and Cressa are found in salt marshes, hence affinities with them are ecologically more credible for central Australia. T. trioblatus is found in late Eocene sediments deposited under episodic marine transgressions; an environment likely to stimulate the evolution of new species tolerant to saline conditions.

Journal Article↗

Alternative SEM techniques for observing pyritised fossil material.

Two scanning electron microscopy (SEM) electron-specimen interactions that provide images based on sample crystal structure, electron channelling and electron backscattered diffraction, are described. The SEM operating conditions and sample preparation are presented, followed by an example application of these techniques to the study of pyritised plant material. The two approaches provide an opportunity to examine simultaneously, at higher magnifications normally available optically, detailed specimen anatomy and preservation state. Our investigation suggests that whereas both techniques have their advantages, the electron channelling approach is generally more readily available to most SEM users. However, electron backscattered diffraction does afford the opportunity of automated examination and characterisation of pyritised fossil material.

Journal Article↗

Paleoecology and coalescence: phylogeographic analysis of hypotheses from the fossil record.

The application of principles from coalescence theory to genealogical relationships within species can provide insights into the process of diversification and the influence of biogeography on distributional patterns. There are several features that make some organisms more suitable for detailed studies of historical processes; in particular, limited dispersal, which serves to conserve the patterns of genetic variation that developed during colonization. We describe the potential benefits of studies that integrate analyses of genetic variation with information from the fossil pollen record and present recent examples of the application of quantitative methods of phylogeographic analysis.

Journal Article↗

Trypsin-like enzymes from two morphotypes of the 'living fossil' Triops (Crustacea: Branchiopoda: Notostraca).

Trypsin-like enzymes from two morphotypes (here called short and long) of the 'living fossil' Triops of Baja California Sur, Mexico were studied. Adults of both morphotypes were obtained from outdoor static cultures using dry soil from the natural habitats as a source of cysts and culture substrate. Individual and pooled extracts were made from dissected digestive tubes. The effect of pH and temperature on the trypsin activity was studied using N-alpha-benzoyl-DL-Arg-p-nitroanilide (BAPNA) as substrate. The highest proteolytic activity was found at the same pH with extracts of both morphotypes. At this pH, there was greater proteolytic activity at a lower temperature with the short morphotype extract than with the long morphotype extract. Substrate-SDS-PAGE zymograms showed bands of activity. Short morphotype extracts produced six bands; five of them were serine proteases of which three were trypsin-like enzymes. Long morphotype extracts revealed eight bands; six of them were serine proteases of which three were trypsin-like enzymes.

Animals↗