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PubMed1994

Designing pathways for environmental purposes.

Genetic modifications intended to improve the properties of enzymes or entire metabolic pathways involved in hazardous waste treatment have resulted in the discovery of promising approaches for expanding the utility of biotreatment. Construction of hybrid metabolic pathways as well as hybrid enzymes, site-directed mutagenesis, and gene amplification have all facilitated the desired outcome of more complete and rapid contaminant removal and considerably broadened substrate specificity.

Biodegradation, Environmental↗
PubMed1996

Intrinsic bioremediation: an environmental restoration technology.

In the past year, there has been a dramatic maturation of intrinsic bioremediation technologies. As methods pertinent to the intrinsic bioremediation of fuel hydrocarbons have become better established, a comprehensive protocol has been developed for the validation and prediction of these processes. Study of intrinsic bioremediation of other prevalent contaminants, such as chlorinated aliphatics, polychlorinated biphenyls, and high explosives, has also been undertaken.

Biodegradation, Environmental↗
PubMedDate not supplied

The use of phosphate in detergents and possible replacements for phosphate.

About 5% of the total phosphate mined worldwide is used in detergents. The chemical form in which phosphate is used in detergents is predominantly pentasodium triphosphate (PSTP). The most significant feature for the use of PSTP in detergents is its ability to form soluble and strong complexes with calcium and magnesium ions. This provides a strong synergism with regard to detergency when PSTP is used in combination with synthetic surfactants. Other important features of PSTP are its ability to disperse dirt in the washing solution, its weak alkalinity, its crystalline form when dry (which enables production of crisp powders) and, last but not least, its toxicological acceptability. The development of PSTP for use in detergents has a history of over 25 years. In certain areas of highly developed countries where effluents from major centres of population can reach stagnant surface waters a rapid increase of eutrophication of these surface waters is observed. Phosphates are being recognized as one of the essential nutrients contributing to the eutrophication and detergents are one of the many sources of phosphate discharged to the environment. This is now causing demands for reduction in or even banning of the use of phosphates in detergents. Major reserach projects and some practical approaches to meeting these demands are described. The potential environmental impact of removing phosphate from detergents remains, however, doubtful, as it has been demonstrated in Sweden that phosphate removal by sewage treatment is the most effective measure to control phosphate discharges. This makes the case of phosphates in detergents an example of how science and technology can become entangled with politics.

Biodegradation, Environmental↗
PubMed1979

Use of casein, tyrosine, and hypoxanthine in the identification of nonfermentative gram-negative bacilli.

Four hundred and five (405) strains of nonfermentative gram-negative bacilli (NFB) were identified using conventional tests. The NFB studied include 323 originating from clinical specimens, 37 from environmental samples, and 45 authentic strains from other workers and from our culture collections. All these strains were studied for their ability to degradate casein, tyrosine, and hypoxanthine. It was found that these tests are useful in identifying NFB within 24 to 48 h when used with other tests.

Bacteria↗
PubMed1994

Microbial degradation of explosives and related compounds.

The pollution of soil and water with explosives and related compounds caused by military activities has been known for a long time, but progress in understanding the environmental fate of such substances has only been made in the last few years. Microbial processes could be used for the remediation of explosives-contaminated soils and waste waters because it has been shown that a variety of different microorganisms are able to metabolize these chemical compounds. In some cases even a complete mineralization has been found, whereas in others only biotransformation reactions took place, producing more or less toxic and/or recalcitrant metabolites. Studies with pure cultures of bacteria and fungi have given detailed insights into the biodegradation pathways of at least some nitroorganic compounds. Additionally, some of the key enzymes have been isolated and purified or studied in crude extracts. This review summarizes information on the biodegradation and biotransformation pathways of several important explosives. This may be useful in developing microbiological methods for a safe and economic clean-up of soil and water contaminated with such compounds. It also shows the necessity of further investigations concerning the microbial metabolism of these substances.

Bacteria↗
PubMed2003

Microbial isotopic fractionation of perchlorate chlorine.

Perchlorate contamination can be microbially respired to innocuous chloride and thus can be treated effectively. However, monitoring a bioremediative strategy is often difficult due to the complexities of environmental samples. Here we demonstrate that microbial respiration of perchlorate results in a significant fractionation ( approximately -15 per thousand ) of the chlorine stable isotope composition of perchlorate. This can be used to quantify the extent of biotic degradation and to separate biotic from abiotic attenuation of this contaminant.

Betaproteobacteria↗
PubMed2005

Degradation of beta-Hexachlorocyclohexane by Haloalkane Dehalogenase LinB from Sphingomonas paucimobilis UT26.

Beta-Hexachlorocyclohexane (beta-HCH) is the most recalcitrant among the alpha-, beta-, gamma-, and delta-isomers of HCH and causes serious environmental pollution problems. We demonstrate here that the haloalkane dehalogenase LinB, reported earlier to mediate the second step in the degradation of gamma-HCH in Sphingomonas paucimobilis UT26, metabolizes beta-HCH to produce 2,3,4,5,6-pentachlorocyclohexanol.

Bacterial Proteins↗
PubMed2005

[Investigation on removal of organic pollutions in landfill leachate in Guangzhou City, China].

A set of simultaneous oxic and anaerobic bioreactor was used to treat the landfill leachate generated from Datianshan Landfill in Guangzhou, China. The results demonstrate that the average effluent concentration of COD and NH4(+)-N was 129 mg x L(-1) and 10 mg x L(-1) respectively, both of them can be controlled below the Chinese second grade discharge permit levels (COD(Cr) < 300 mg x L(-1), NH4(+)-N < 25 mg x L(-1)) for this kind of wastewater. Moreover, the GC-MS analysis was used to measure the organic pollutants contained in landfill leachate. 87 kinds of organic matters in this kind of landfill leachate were detected and discovered, and 16 of them belong to the list of environmental priority pollutants which is considered by EPA in USA. As a result, 31 kinds of totally 87 kinds of organic pollutants were completely removed, 14 kinds of totally 87 kinds of organic pollutants were removed more than 80%, the removal efficiencies of 25 kinds of organic pollutants reached over 50%.

Biodegradation, Environmental↗
PubMed1998

Subconjunctival biocompatibility of a viscous bioerodable poly(ortho ester).

The biocompatibility of a viscous poly(ortho ester) (POE) intended for prolonged intraocular drug delivery was studied. This hydrophobic and bioerodable carrier was subconjunctivally injected in rabbits and evaluated both clinically and histologically. To assess the cause of the triggered transient acute inflammatory reaction, the two monomers, the intermediate and final degradation products, and the local toxicity of different solvents used during the polymer preparation were tested. Since the two initial monomers and the intermediate degradation products induced only moderate inflammation, the main acute inflammatory reaction is attributed to the formation of an acidic by-product which has been monitored in vitro by measuring the progressive decrease of the environmental pH. The influence of the sterilization procedure on tissue biocompatibility was established by comparing two polymers of similar molecular weight: one after gamma-sterilization, and an aseptically synthesized one. The biocompatibility was significantly improved by avoiding irradiation of the polymer.

Animals↗
PubMed2006

Contribution of the arbuscular mycorrhizal symbiosis to heavy metal phytoremediation.

High concentrations of heavy metals (HM) in the soil have detrimental effects on ecosystems and are a risk to human health as they can enter the food chain via agricultural products or contaminated drinking water. Phytoremediation, a sustainable and inexpensive technology based on the removal of pollutants from the environment by plants, is becoming an increasingly important objective in plant research. However, as phytoremediation is a slow process, improvement of efficiency and thus increased stabilization or removal of HMs from soils is an important goal. Arbuscular mycorrhizal (AM) fungi provide an attractive system to advance plant-based environmental clean-up. During symbiotic interaction the hyphal network functionally extends the root system of their hosts. Thus, plants in symbiosis with AM fungi have the potential to take up HM from an enlarged soil volume. In this review, we summarize current knowledge about the contribution of the AM symbiosis to phytoremediation of heavy metals.

Biodegradation, Environmental↗
PubMed2005

Fate, behavior and effects of surfactants and their degradation products in the environment.

Surfactants are widely used in household and industrial products. After use, surfactants as well as their products are mainly discharged into sewage treatment plants and then dispersed into the environment through effluent discharge into surface waters and sludge disposal on lands. Surfactants have different behavior and fate in the environment. Nonionic and cationic surfactants had much higher sorption on soil and sediment than anionic surfactants such as LAS. Most surfactants can be degraded by microbes in the environment although some surfactants such as LAS and DTDMAC as well as alkylphenols may be persistent under anaerobic conditions. LAS were found to degrade in sludge amended soils with a half-lives of 7 to 33 days. Most surfactants are not acutely toxic to organisms at environmental concentrations and aquatic chronic toxicity of surfactants occurred at concentrations usually greater than 0.1 mg/L. However, alkylphenols have shown to be capable of inducing the production of vitellogenin in male fish at a concentration as low as 5 microg/L. More toxicity data are needed to assess the effects on terrestrial organisms such as plants.

Animals↗
PubMed2005

Trace elements in agroecosystems and impacts on the environment.

Trace elements mean elements present at low concentrations (mg kg-1 or less) in agroecosystems. Some trace elements, including copper (Cu), zinc (Zn), manganese (Mn), iron (Fe), molybdenum (Mo), and boron (B) are essential to plant growth and are called micronutrients. Except for B, these elements are also heavy metals, and are toxic to plants at high concentrations. Some trace elements, such as cobalt (Co) and selenium (Se), are not essential to plant growth but are required by animals and human beings. Other trace elements such as cadmium (Cd), lead (Pb), chromium (Cr), nickel (Ni), mercury (Hg), and arsenic (As) have toxic effects on living organisms and are often considered as contaminants. Trace elements in an agroecosystem are either inherited from soil parent materials or inputs through human activities. Soil contamination with heavy metals and toxic elements due to parent materials or point sources often occurs in a limited area and is easy to identify. Repeated use of metal-enriched chemicals, fertilizers, and organic amendments such as sewage sludge as well as wastewater may cause contamination at a large scale. A good example is the increased concentration of Cu and Zn in soils under long-term production of citrus and other fruit crops. Many chemical processes are involved in the transformation of trace elements in soils, but precipitation-dissolution, adsorption-desorption, and complexation are the most important processes controlling bioavailability and mobility of trace elements in soils. Both deficiency and toxicity of trace elements occur in agroecosystems. Application of trace elements in fertilizers is effective in correcting micronutrient deficiencies for crop production, whereas remediation of soils contaminated with metals is still costly and difficult although phytoremediation appears promising as a cost-effective approach. Soil microorganisms are the first living organisms subjected to the impacts of metal contamination. Being responsive and sensitive, changes in microbial biomass, activity, and community structure as a result of increased metal concentration in soil may be used as indicators of soil contamination or soil environmental quality. Future research needs to focus on the balance of trace elements in an agroecosystem, elaboration of soil chemical and biochemical parameters that can be used to diagnose soil contamination with or deficiency in trace elements, and quantification of trace metal transport from an agroecosystem to the environment.

Adsorption↗
PubMed2000

Field applications of genetically engineered microorganisms for bioremediation processes.

Genetically engineered microorganisms (GEMs) have shown potential for bioremediation applications in soil, groundwater, and activated sludge environments, exhibiting enhanced degradative capabilities encompassing a wide range of chemical contaminants. However, the vast majority of studies pertaining to genetically engineered microbial bioremediation are supported by laboratory-based experimental data. In general, relatively few examples of GEM applications in environmental ecosystems exist. Unfortunately, the only manner in which to fully address the competence of GEMs in bioremediation efforts is through long-term field release studies. It is therefore essential that field studies be performed to acquire the requisite information for determining the overall effectiveness and risks associated with GEM introduction into natural ecosystems.

Biodegradation, Environmental↗
PubMed2006

Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1.

Arthrobacter sp. strains are among the most frequently isolated, indigenous, aerobic bacterial genera found in soils. Member of the genus are metabolically and ecologically diverse and have the ability to survive in environmentally harsh conditions for extended periods of time. The genome of Arthrobacter aurescens strain TC1, which was originally isolated from soil at an atrazine spill site, is composed of a single 4,597,686 basepair (bp) circular chromosome and two circular plasmids, pTC1 and pTC2, which are 408,237 bp and 300,725 bp, respectively. Over 66% of the 4,702 open reading frames (ORFs) present in the TC1 genome could be assigned a putative function, and 13.2% (623 genes) appear to be unique to this bacterium, suggesting niche specialization. The genome of TC1 is most similar to that of Tropheryma, Leifsonia, Streptomyces, and Corynebacterium glutamicum, and analyses suggest that A. aurescens TC1 has expanded its metabolic abilities by relying on the duplication of catabolic genes and by funneling metabolic intermediates generated by plasmid-borne genes to chromosomally encoded pathways. The data presented here suggest that Arthrobacter's environmental prevalence may be due to its ability to survive under stressful conditions induced by starvation, ionizing radiation, oxygen radicals, and toxic chemicals.

Arthrobacter↗
PubMed2002

[Microbial reduction of iron, manganese as well as other metals and their individual significance in environmental bioremediation].

In this paper, microbial reduction of iron, manganese and other metals in soils and waters were discussed. Microorganisms reducing to different metals such as iron, manganese and uranium as well as selenium and their enzymatic and non-enzymatic mechanisms for reducing to different metals were summarized. Moreover, the significance of reduction of different microorganisms of metals in the bioremediation of metals-contaminated environment was also evaluated.

Biodegradation, Environmental↗
PubMedDate not supplied

Importance and difficulties of research on metal speciation in the aquatic ecosystem: an ecologist's viewpoint.

Post-war research on the role of heavy metals in the environment was stimulated by a new sensitivity towards nature, the increasing impact of human activities on the environment, continuous progress in analytical chemistry and the development of radioecology. Nowadays, very low concentrations of total metal can be quantified in the various compartments of the ecosystem (e.g. water, sediment, suspended particles, plants and animals), and the physical and chemical forms of the metal identified. A current difficulty is how to evaluate the role of the various metal forms in the natural ecosystem. The major issues to be tackled are: variations over time of metal species in relation to the influence of environmental variables; the fact that the availability of the metal varies with the plant and animal species; the ability of the organism to select the metals and their forms; the influence of suspended particles and chelating substances on metal uptake, detoxification strategies and synergic and antagonistic effects. The advantages and disadvantages of monitoring using bioaccumulator organisms are discussed.

Animals↗
PubMed1999

Inhibition of atrazine degradation by cyanazine and exogenous nitrogen in bacterial isolate M91-3.

A variety of s-triazine herbicides and nitrogen fertilizers frequently occur as co-contaminants at pesticide manufacturing and distribution facilities. The degradation of atrazine and cyanazine by the bacterial isolate M91-3 was investigated in washed-cell suspensions and crude cellular extracts. Cyanazine competitively inhibited atrazine degradation. The maximum atrazine degradation rate (Vmax) was 41 times higher and the half-saturation constant for the inhibitor (Ki) was 1.3 times higher in the crude cellular extract than in the washed-cell suspension, suggesting that cellular uptake influenced degradation of the s-triazines. Cultures that had received prior exposure to atrazine and simazine exhibited comparable atrazine degradation rates, while cells exposed to cyanazine, propazine, ametryne, cyanuric acid, 2-hydroxyatrazine, biuret, and urea exhibited a lack of atrazine-degradative activity. Growth in the presence of exogenous inorganic nitrogen inhibited subsequent atrazine-degradative activity in washed-cell suspensions, suggesting that regulation of s-triazine and nitrogen metabolism are linked in this bacterial isolate. These findings have significant implications for the environmental fate of s-triazines in agricultural settings since these herbicides are frequently applied to soils receiving N fertilizers. Furthermore, these results suggest that bioremediation of s-triazine-contaminated sites (common at pesticide distribution facilities in the cornbelt) may be inhibited by the presence of N fertilizers that occur as co-contaminants.

Atrazine↗