PubMed Health⌕ Search

SEARCH · PubMed Health

Results for “Halogenation”

Explore indexed PubMed citations for clinical trials, systematic reviews and public health research. Read source abstracts and follow each citation to its original PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 541 records · Page 30Linked to original sources

Halogenation of unactivated carbon centers in natural product biosynthesis: trichlorination of leucine during barbamide biosynthesis.

The in vitro reconstitution of leucine halogenation during barbamide biosynthesis has been accomplished. It has been demonstrated that the triple chlorination of the unactivated pro-R methyl group of the peptidyl carrier protein-tethered l-Leu substrate is carried out by the tandem action of two nonheme iron(II)-dependent halogenases, BarB1 and BarB2. Investigation of the substrate specificities of each of the halogenating enzymes revealed their complementary roles in the generation of trichloroleucine.

Cyanobacteria↗

Role of iodine in thyroid hormones: molecular conformation of a halogen-free hormone analogue.

The molecular conformation of the halogen-free thyroid hormone analogue, N-acetyl-4'-methoxy-3,5,3'-trimethyl-L-thyronine ethyl ester, has beeen determined by X-ray diffraction techniques. The observed molecular conformation is similar to that found for the natural hormone 3,5,3'-triiodo-L-thyronine (T3). In this structure, the 3'-methyl group is distal, the overall conformation is cisoid, and the diphenyl ether conformation is twist--skewed. These structural similarities with T3 show that the conformation features required by the active hormone can still be maintained with methyl substitution. The observation that the halogen-free analogues have relatively high activity but extremely low protein binding affinity implies that the role of iodine in hormone transport and biological activity can be deifferentiated. These data suggest that the iodines enhance hormone--protein binding by virtue of their electronic, as well as steric, properties.

Chemical Phenomena↗

Estrogen receptor based imaging agents. 2. Synthesis and receptor binding affinity of side-chain halogenated hexestrol derivatives.

We have synthesized as potential imaging agents for human breast tumors a series of hexestrol analogues bearing the halogens fluorine, chlorine, bromine, and iodine at the terminus of the hexane chain. The binding affinity of these compounds for the estrogen receptor from uterine tissues forms a monotonically decreasing series, starting at 129% of that of estradiol for the fluoro analogue and decreasing to 60% for the iodo analogue. Such a modest decrease in binding affinity is thought to reflect the preference of the receptor for lipophilic groups and for substituents of moderate steric size at this site, parameters which change in opposite directions in the halogen sequence going from fluorine to iodine. Three estrogenic bis(trifluoromethyl)diphenylethylenes, prepared by DuPont, also showed substantial binding affinities for the estrogen receptor. In terms of ease of radiolabeling and high receptor binding selectivity, the compound that appears to be the most promising candidate for a breast tumor imaging agent in these series is the chain terminal fluorohexestrol.

Animals↗

Synthesis and antitumor activity of halogen-substituted 4-(3,3-dimethyl-1-triazeno)quinolines.

Halogenated 4-(3,3-dimethyl-1-triazeno)quinolines were synthesized as potential antitumor agents on the basis of the biochemical pharmacological properties of existing triazenes, their structural-activity relationships, and the high melanin binding of chloroquine and iodoquine in vivo and in vitro. They were synthesized by diazotization of appropriate halogen-substituted 4-aminoquinolines in fluoboric acid at -5 degrees C followed by coupling with dimethylamine. Among these new compounds, 8-chloro-4-(3,3-dimethyl-1-triazeno)quinoline produces significant antitumor activity against both P-388 and L1210 murine leukemias. Although only marginally active or inactive against P-388, the other chloro, bromo, or iodo analogues show activity against L1210 comparable to that of dacarbazine (DIC). However, none of these compounds is active against B-16 melanoma. Compared with DIC these new agents demonstrate a higher in vitro affinity for melanin; however, this affinity is apparently not correlated with their antitumor activity.

Animals↗

Synthesis and topical antiinflammatory properties of 17,21-bis(acetyloxy)-6beta,9-difluoro-11beta-hydroxypregna-1,4-diene-3,20-dione and related 2-halogenated compounds.

Introduction of a halogen atom at C-2 of steroid 3-ketofluorohydrins, obtained from the corresponding 5alpha,6alpha-epoxides by trans-diaxial opening with hydrofluoric acid, prevents the 6beta-fluorine atom from undergoing rearrangement to the more stable 6alpha configuration when the 5-tert-hydroxyl is split off to yield to yield a conjugated double bond. Two processes were investigated for the synthesis of 17,21-bis(acetyloxy)-6beta-fluoro-1,4,9(11)-triene-3,20-dione (24a) and the related 2-bromo compound 24b starting from the known 21-(acetyloxy)-6beta-fluoro-5alpha,11alpha,17-trihydroxypregnane-3,20-dione (13). Successive reaction with hypobromous acid, epoxidation, and fluorination converted 24a and 24b into the title compound 27a and the analogue 2-bromo compound 27b. In addition, a synthesis of 17,21-bis(acetyloxy)-2-chloro-6beta,9-difluoropregna-1,4-diene-3,20-dione (27c) is reported. The antiinflammatory activity of 17,21-bis-(acetyloxy)-6beta,9-difluoropregna-1,4-diene-3,20-dione (27a) and its 2-halogenated analogues 27b and 27c in comparison with the corresponding 6alpha,9-difluoro epimers was studied. Some 6beta-fluoro compounds displayed high topical antiinflammatory activity without systemic effects.

Administration, Oral↗

Effect of 4'-halogen substitution on the mutagenicity of trans-4-acetamidostilbene and trans-4-(N-hydroxyacetamido)stilbene in the Salmonella typhimurium test system.

The effect of halogen substituents placed at the 4' position of trans-4-acetamidostilbene (1, AAS) to alter the pattern of biotransformation and thus the mutagenicity of these derivative was evaluated by comparing the mutagenic effects of 1 on Salmonella typhimurium TA-100 with the corresponding 4'-F (2), 4'-Cl (3), and 4'-Br (4) analogues. The mutagenic properties of trans-4-(N-hydroxyacetamido)stilbene (5) and its 4'-F (6), 4'-Cl (7), and 4'-Br (8) derivatives were also evaluated in this system. Both the amides (1-4) and hydroxamic acids (5-8) required the presence of a metabolic activating system prepared from hamster liver in order to produce a mutagenic effect. All of these compounds were mutagenic to A-100. Their mutagenic potencies were markedly influenced by the 4'-halogen substituents, the relative mutagenic potencies of the amides being 2 (4'-F) greater than 1 (4'-H), 3 (4'Cl) greater than 4 (4'-Br), while the hydroxamic acids followed the order of 1 (4'-H) greater than 2 (4'-F) greater than 3 (4'-Cl), 4 (4'-Br).

Animals↗

Synthesis of halogen-substituted pyridyl and pyrimidyl derivatives of [3,2-c]pyrazolo corticosteroids: strategies for the development of glucocorticoid receptor mediated imaging agents.

Ligands for the glucocorticoid receptor labeled with high-energy isotopes are highly desired for their potential applications in nuclear medical studies of the brain where the dysregulation of this receptor system is thought to be involved in various neurodegenerative disorders. Analogues of the glucocorticoid cortivazol have previously been prepared as target compounds for labeling with high-energy isotopes. However, the phenyl rings of arylpyrazoles of this type are not sufficiently activated for nucleophilic substitution reactions that are generally required for the synthesis of radiohalogenated analogues. Since suitably substituted aromatic nitrogen heterocyclic groups are amenable to nucleophilic substitution, the goal of this study was the synthesis of pyridylpyrazolo and pyrimidylpyrazolo analogues similar to cortivazol that could be labeled with radiohalogens in the pyridine or pyrimidine rings. We describe the synthesis of several [3,2-c]pyrazolo steroids containing pyridyl, halopyridyl, and pyrimidyl substituents at the 2' position of the pyrazole ring. These compounds were tested for binding to the glucocorticoid receptor and for biological activity in glucocorticoid responsive HeLa cells grown in tissue culture. Of the pyridyl and pyrimidyl derivatives, 2'-(3-pyridyl)-11 beta,17,21-trihydroxy-16 alpha-methyl-20-oxopregn-4-eno[3,2-c]pyrazole showed superior activity in both assays and it was used as the basis for the synthesis of several analogues that were halogenated in the pyridine ring. These halogenated compounds were all tested for their binding to the glucocorticoid receptor and for their biological activity. One, a fluorinated compound 2'-(2-fluoro-5-pyridyl)-11 beta,17,21-trihydroxy-16 alpha-methyl-20-oxopregn-4-eno[3,2-c]pyrazole had excellent activity, considerably better than the potent glucocorticoid dexamethasone. Most importantly, fluorination was achieved using a nucleophilic exchange reaction, a method that is adaptable to radiolabeling with the positron-emitting isotope fluorine-18. Thus, considering its superior biological activity and adaptability for facile radiosynthesis, this target compound has the potential for imaging of glucocorticoid receptor containing tissues using positron emission tomography.

Alkaline Phosphatase↗

Halogenated 4-(phenoxymethyl)piperidines as potential radiolabeled probes for sigma-1 receptors: in vivo evaluation of [123I]-1-(iodopropen-2-yl)-4-[(4-cyanophenoxy)methyl]pip eri dine.

Several halogenated 4-(4-phenoxymethyl)piperidines were synthesized as potential sigma receptor ligands. The affinity and selectivity of these compounds were determined using in vitro receptor binding assays, and their log P values were estimated using HPLC analysis. The effect of various N-substituents on the sigma-1 and sigma-2 dissociation constants was examined. These substituents included fluoroalkyl, hydroxyalkyl, iodopropenyl, and selected ortho-, meta-, and para-substituted benzyl groups. Also determined were the effects of various moieties on the phenoxy ring; specifically 4-iodo, 4-bromo, 4-nitro, 4-cyano, 3-bromo, and pentafluoro substituents were examined. The ranges in the dissociation constants of these compounds for sigma-1 and sigma-2 receptors were 0.38-24.3 and 3.9-361 nM, respectively. The ratio of Ki (sigma-2/sigma-1) ranged from 1.19 to 121. One of the most promising of the iodinated ligands, 1-(trans-iodopropen-2-yl)-4-[(4-cyanophenoxy)methyl]piperidi ne (4), was labeled with 123I and studied in vivo in adult male rats. High uptake and good retention of radioactivity was observed in the brain and many other organs known to possess sigma receptors. Blocking studies revealed high specific binding of [123I]-4 to sigma receptors in the brain, lung, kidney, heart, muscle, and other organs known to possess these sites. These results indicate that [123I]-4 and other halogenated 4-(phenoxymethyl)piperidines of this series may provide useful probes for in vivo tomographic studies of sigma receptors.

Animals↗

Mechanism of the ring-chain rearrangement in phosphiranes: hydrogen versus halogen migration.

Ab initio quantum chemical calculations including HF, MP2, CCSD(T), CASSCF(10,10)/CASPT2, and B3LYP methods with the 6-31G(d,p) basis set were used to probe the mechanism of the ring-chain rearrangement of halogeno-phosphiranes. It is confirmed that the lowest energy interconversion between C-halogenated-(X)-phosphiranes and vinylphosphines, with X = H, F, Cl, and Br, is a one-step process in which the C-P bond cleavage and X-sigmatropic migration from C to P occur in a concerted manner in a single transition structure. The migration of a hydrogen from CH(H) is slightly favored over that of CX(H), and thus, the cleavage of the C(X)-P bond is preferred. The energy barrier for the whole process involving hydrogen migration in the parent phosphirane is calculated to be about 45 +/- 5 kcal/mol. The migratory aptitude of the atoms X in the uncomplexed species is found as follows: H > Br > Cl > F, either in the gaseous phase or in aqueous and DMSO solutions. The solvation enthalpies that were estimated using a polarizable continuum model (PCM) are rather small and do not modify the relative ordering of the energy barriers. Such a trend is at variance with recent experimental findings on metal-phosphinidene complexes in which only halogen migration was observed. This might arise from a peculiar effect of the metal fragments W(CO)(5) used in the experimental studies to stabilize the phosphorus species that induce a quite different mechanism. Calculations of the (31)P chemical shifts using the GIAO/B3LYP/6-311+G(d,p) method show a remarkable correlation between the delta(31)P(X) chemical shifts of X-phosphiranes and those of X-phosphines (XCH(2)PH(2)), suggesting that the large beta substituent effect is not inherent to the small rings.

Journal Article↗

Sequential nucleophilic substitution on halogenated triazines, pyrimidines, and purines: a novel approach to cyclic peptidomimetics.

A novel concept for the synthesis of macrocyclic peptidomimetics which incorporate heteroaromatic units is reported. The method involves sequential SNAr reactions of orthogonally protected amino groups of peptides and other linear oligomers on halogenated heterocycles such as 2,4,6-trichloro[1,3,5]triazine, 2,4,6-trichloropyrimidine, 4,6-dichloro-5-nitropyrimidine, and 2,6,8-trichloro-7-methylpurine. The scope of this novel solid-phase approach was systematically evaluated by means of the SPOT-synthesis methodology on planar cellulose membranes. Besides the question of the accessibility of different ring sizes and the compatibility with protecting groups of commonly used amino acids, the applicability of the technique toward different halogenated heteroaromatics and peptidomimetics was studied. It was found that the procedure is well suited to assemble a wide variety of cyclic peptidomimetics differing in both size (11- to 37-membered rings) and chemical nature of the assembled backbones.

Amino Acid Sequence↗

Experimental and theoretical studies on the nature of weak nonbonded interactions between divalent selenium and halogen atoms.

To investigate the nature of weak nonbonded selenium...halogen interactions (Se...X interactions; X = F, Cl, and Br), three types of model compounds [2-(CH(2)X)C(6)H(4)SeY (1-3), 3-(CH(2)X)-2-C(10)H(6)SeY (4-6), and 2-XC(6)H(4)CH(2)SeY (7-9); Y = CN, Cl, Br, SeAr, and Me] were synthesized, and their (77)Se NMR spectroscopic behaviors were analyzed in CDCl(3). The gradual upfield shifts of (77)Se NMR absorptions observed for series 1-3 and 4-6 suggested that the strength of Se...X interaction decreases in the order of Se...F > Se...Cl > Se...Br. The quantum chemical calculations at the B3LYP/631H level using the polarizable continuum model (PCM) revealed that the most stable conformer for 1-3 is the one with an intramolecular short Se...X atomic contact in CHCl(3) (epsilon = 4.9) and also that the n(X) --> sigma(Se-Y) orbital interaction (E(Se...X)) can reasonably explain the order of strength for the Se...X interactions. On the other hand, the (77)Se NMR absorptions observed for series 7-9 did not shift significantly from the reference compounds (C(6)H(5)CH(2)SeY), indicating the absence of the Se...X interaction for 7-9 presumably due to attenuation of basicity for the halogen atom that is substituted directly to the aromatic ring. These observations suggested that the n(X) --> sigma(Se-Y) orbital interaction is a dominant factor for formation of weak Se...X interactions. Electron correlation was also suggested to be important for the stability.

Journal Article↗

Ortho-selective nucleophilic aromatic substitution reactions of polyhaloanilines with potassium/sodium o-ethyl xanthate: a convenient access to halogenated 2(3H)-benzothiazolethiones.

Polyhaloanilines bearing an ortho halogen atom undergo smooth nucleophilic aromatic substitution reactions with anionic sulfur nucleophiles at relatively mild temperatures (95-120 degrees C). These reactions are very efficient and highly ortho-selective. With potassium/sodium O-ethyl xanthate as a nucleophile, subsequent cyclization follows to afford halogenated 2(3H)-benzothiazolethiones (2-mercaptobenzothiazoles) in high yields.

Journal Article↗

Unexpected halogen substituent effects on the complex thermal relaxation of naphthopyrans after UV irradiation.

The kinetics of the thermal fading of four halogenated naphthopyrans (NP) have been analyzed using NMR spectroscopy in CD(3)CN. Two photomerocyanines (TT and TC) were detected after UV irradiation. The main relaxation process TC --> NP was coupled with TT/TC isomerization. The activation parameters of the various processes were rationalized by considering electronegativity and polarizability of the halogen substituents and their selective solvation by the electronegative nitrogen of acetonitrile.

Journal Article↗

Intermediates of halogen addition to phenylethynes and protonation of phenylethynyl halides. Open halovinyl cations, bridged halonium, or phenyl-bridged ions: a substituent effect study by DFT and GIAO-DFT.

Formation of alpha-phenyl-beta-halovinyl cation, beta-phenyl-alpha-halovinyl cation, as well as the halogen-bridged and the spirocyclic phenyl-bridged cations as intermediates of protonation of phenylethynyl halides or by halogen addition to phenylethynes was evaluated by DFT at B3LYP/6-31+G(d) and, for comparison in representative cases, by B3LYP/6-311++G(d,p). Relative stabilities of the resulting minima were gauged as a function of substituents on the phenyl group with p-OH, p-OMe, p-H, p-CF3, p-CN, and p-NO2 and with p-OMeH+, p-NO2H+, and p-N2+. In the majority of cases, the alpha-aryl-beta-halovinyl cations were identified as the most likely intermediates, irrespective of X and for most R groups. For R = p-N2+ (with X = Br and Cl), R = CNH+ (with X = Cl), and R = MeOH+ (with X = Br), the corresponding beta-aryl-alpha-halovinyl cations become more stable than alpha-aryl-beta-halovinyl cations (but in most cases with a relatively small stability difference). Whereas competitive formation of the spirocyclic aryl bridged cations via this route appears remote, with R = N2+ and R = NO2H+ as substituents (with X = Br), cyclic halonium ions could intervene, since their relative stabilities are within approximately 4 kcal/mol of the lowest energy vinyl cations. Geometrical features, GIAO NMR chemical shifts, and NPA-derived charges were used to gain insight into the structural/electronic features in the resulting mono and dications. The study provides a basis for stable ion and solvolytic/kinetic studies on a series of substituted phenylethynyl halides that are being synthesized.

Journal Article↗

Electrochemical Reduction of Mono- and Dihalothiophenes at Carbon Cathodes in Dimethylformamide. First Example of an Electrolytically Induced Halogen Dance.

Cyclic voltammetry and controlled-potential electrolysis have been employed to probe the electrochemical reduction of a number of mono- and dihalothiophenes at carbon cathodes in dimethylformamide containing tetramethylammonium perchlorate. Reduction of 2-bromo-, 3-bromo-, 2-chloro-, 3-chloro-, and 2-iodothiophene gives rise to a single irreversible cyclic voltammetric wave for each compound that corresponds to the two-electron cleavage of the carbon-halogen bond, and thiophene is obtained as the only product. Cyclic voltammograms for the reduction of 2,3-dibromo-, 2,4-dibromo-, 2,5-dibromo-, 3,4-dibromo-, 2-bromo-5-chloro-, and 3-bromo-2-chlorothiophene each exhibit a pair of irreversible two-electron waves. Electrolyses of either 2,3-dibromo- or 2,4-dibromothiophene at potentials corresponding to the first voltammetric wave yield a two-to-one mixture of 3-bromo- and 3,4-dibromothiophene; under similar conditions, electrolyses of 2,5-dibromothiophene give a mixture of 2-bromo-, 3-bromo-, and 3,4-dibromothiophene, electrolyses of 2-bromo-5-chlorothiophene afford a mixture of 3-bromo-, 3,4-dibromo-, 3-bromo-2-chloro-, 4-bromo-2-chloro-, and 2-chlorothiophene, and electrolyses of 3-bromo-2-chlorothiophene yield 2-chlorothiophene. Aside from the last result, these product distributions appear to arise from an electrolytically induced halogen dance. When electrolyses of the dibromothiophenes and of 2-bromo-5-chloro- and 3-bromo-2-chlorothiophene are performed at potentials that correspond to the second voltammetric wave, thiophene is the only product obtained.

Journal Article↗

Gas-phase molecular halogen formation from NaCl and NaBr aerosols: when are interface reactions important?

Unique interface reactions at the surface of sea-salt particles have been suggested as an important source of photolyzable gas-phase halogen species in the troposphere. Many factors influence the relative importance of interface chemistry compared to aqueous-phase chemistry. The Model of Aerosol, Gas, and Interfacial Chemistry (MAGIC 2.0) is used to study the influence of interface reactions on gas-phase molecular halogen production from pure NaCl and NaBr aerosols. The main focus is to identify the relative importance of bulk compared to interface chemistry and to determine when interface chemistry dominates. Results show that the interface process involving Cl-(surf) and OH(g) is the main source of Cl2(g). For the analogous oxidation of bromide by OH, gaseous Br2 is formed mainly in the bulk aqueous phase and transferred across the interface. However, the reaction of Br-(surf) with O3(g) at the interface is the primary source of Br2(g) under dark conditions. The effect of aerosol size is also studied. Potential atmospheric implications and effects of interface processes on aerosol pH are discussed.

Journal Article↗

Multireference configuration interaction calculation of the B(2)a"-X(2)a" transition of halogen- and methyl-substituted vinoxy radicals.

Ground and second excited electronic states of halogen and monomethyl substituted vinoxy radicals were studied by multireference configuration interaction (MRCI) calculation. Optimized geometries, rotational constants and vibrational frequencies of vinoxy and 1-fluorovinoxy showed good agreement with experimental values. Differences in calculated and observed B-X electronic transition energies were less than 0.1 eV and observed trends of blue shift upon increasing the number of substituted halogen atoms were reproduced by MRCI calculation. Observed fluorescence lifetimes of the vibrationless level in B state were in good agreement with calculated values. Rotational profiles of the 0-0 vibronic bands were successfully simulated with calculated rotational constants and transition dipole moments. Energy differences between planar and nonplanar optimized geometries in B state showed good correlation with the onset of fast nonradiative decay in B state, supporting the proposed mechanism of nonradiative decay via avoided crossings from B to A state which is followed by the decay to the ground state via conical intersections.

Journal Article↗

Novel halogenated metabolites from the Malaysian Laurencia pannosa.

In connection with our chemotaxonomic studies of Malaysian species of the red algal genus Laurencia, the chemical composition of Laurencia pannosa Zanardini was examined. Two halogenated sesquiterpenoids, named pannosanol (1) and pannosane (2), have been isolated along with a halogenated C15-acetogenin, (3Z)-chlorofucin (3). The structures of these compounds were determined from their spectroscopic data (IR, 1H NMR, 13C NMR, 2D NMR, and MS). Pannosanol and pannosane are novel halometabolites with an unusual rearranged chamigrane framework. Antibacterial activities of these metabolites against marine bacteria are also described.

Anti-Bacterial Agents↗