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Results for “Sanger sequencing”

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At least 541 records · Page 30Linked to original sources

PubMed2026

The chromosomal genome sequence of the lesser starlet coral, Siderastrea radians (Pallas, 1766) (Scleractinia: Rhizangiidae) and its associated microbial metagenome sequences.

We present a genome assembly from a specimen of Siderastrea radians (lesser starlet coral; Cnidaria; Anthozoa; Scleractinia; Rhizangiidae). The genome sequence has a total length of 807.19 megabases. Most of the assembly (94.17%) is scaffolded into 14 chromosomal pseudomolecules. The mitochondrial genome has also been assembled, with a length of 19.38 kilobases. Gene annotation of this assembly by Ensembl identified 47 051 protein-coding genes. From the metagenome data, we recovered two binned metagenomes assigned to the bacterial phylum Bacteroidota and class Bacteroidia.

Scleractinia↗

PubMed2026

The genome sequence of the Royal Mantle, Catarhoe cuculata (Hufnagel, 1767) (Lepidoptera: Geometridae).

We present a genome assembly from an individual male Catarhoe cuculata (Royal Mantle; Arthropoda; Insecta; Lepidoptera; Geometridae). The assembly contains two haplotypes with total lengths of 297.56 megabases and 297.17 megabases. Most of haplotype 1 (99.41%) is scaffolded into 31 chromosomal pseudomolecules, including the Z sex chromosome. Haplotype 2 was assembled to scaffold level. The mitochondrial genome has also been assembled, with a length of 17.67 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces genomes for eukaryotic species found in Britain and Ireland.

Catarhoe cuculata↗

PubMed2025

The genome sequence of the Treble Lines, Charanyca trigrammica (Hufnagel, 1766) (Lepidoptera: Noctuidae).

We present a genome assembly from an individual male Charanyca trigrammica (Treble Lines; Arthropoda; Insecta; Lepidoptera; Noctuidae). The assembly contains two haplotypes with total lengths of 546.43 megabases and 546.58 megabases. Most of haplotype 1 (99.97%) is scaffolded into 31 chromosomal pseudomolecules, including the Z sex chromosome. Haplotype 2 was assembled to scaffold level. The mitochondrial genome has also been assembled, with a length of 15.44 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Charanyca trigrammica; Treble Lines; genome sequen↗

PubMed2026

The genome sequence of a muscid fly, Lispocephala verna (Fabricius, 1794) (Diptera: Muscidae).

We present a genome assembly from an individual female Lispocephala verna (muscid fly; Arthropoda; Insecta; Diptera; Muscidae). The assembly contains two haplotypes with total lengths of 987.71 megabases and 934.62 megabases. Most of haplotype 1 (95.8%) is scaffolded into 5 chromosomal pseudomolecules. Haplotype 2 was assembled to scaffold level. The mitochondrial genome has also been assembled, with a length of 16.34 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces genomes for eukaryotic species found in Britain and Ireland.

Diptera↗

PubMed2026

The genome sequence of the Downland Conch, Aethes tesserana (Denis & Schiffermüller) , 1775 (Lepidoptera: Tortricidae).

We present a genome assembly from an individual male Aethes tesserana (Downland Conch; Arthropoda; Insecta; Lepidoptera; Tortricidae). The assembly contains two haplotypes with total lengths of 486.12 megabases and 482.92 megabases. Most of haplotype 1 (99.81%) is scaffolded into 30 chromosomal pseudomolecules, including the Z sex chromosome. Haplotype 2 was assembled to scaffold level. The mitochondrial genome has also been assembled, with a length of 15.54 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces genomes for eukaryotic species found in Britain and Ireland.

Aethes tesserana↗

PubMed2026

The genome sequence of the Common Quaker, Orthosia cerasi (Fabricius, 1775) (Lepidoptera: Noctuidae).

We present a genome assembly from an individual female Orthosia cerasi (Common Quaker; Arthropoda; Insecta; Lepidoptera; Noctuidae). The genome sequence has a total length of 1 022.21 megabases. Most of the assembly (99.88%) is scaffolded into 29 chromosomal pseudomolecules, including the Z sex chromosome. The mitochondrial genome has also been assembled, with a length of 15.39 kilobases. Gene annotation of this assembly on Ensembl identified 15 702 protein-coding genes. This assembly was generated as part of the Darwin Tree of Life project, which produces genomes for eukaryotic species found in Britain and Ireland.

Common Quaker↗

PubMed2026

The genome sequence of the brown tree ant, Lasius brunneus (Latreille, 1798) (Hymenoptera: Formicidae).

We present a genome assembly from an individual female Lasius brunneus (Brown Ant; Arthropoda; Insecta; Hymenoptera; Formicidae). The genome sequence has a total length of 264.94 megabases. Most of the assembly (97.62%) is scaffolded into 15 chromosomal pseudomolecules. The mitochondrial genome has also been assembled, with a length of 18.03 kilobases. Gene annotation of this assembly on Ensembl identified 15 125 protein-coding genes. This assembly was generated as part of the Darwin Tree of Life project, which produces genomes for eukaryotic species found in Britain and Ireland.

Hymenoptera↗

PubMed2026

The genome sequence of the Bluebell moth, Eana incanana (Stephens, 1852) (Lepidoptera: Tortricidae).

We present a genome assembly from an individual male Eana incanana (Bluebell moth; Arthropoda; Insecta; Lepidoptera; Tortricidae). The assembly contains two haplotypes with total lengths of 372.33 megabases and 373.40 megabases. Most of haplotype 1 (99.64%) is scaffolded into 30 chromosomal pseudomolecules, including the Z sex chromosome. Haplotype 2 was assembled to scaffold level. The mitochondrial genome has also been assembled, with a length of 16.01 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces genomes for eukaryotic species found in Britain and Ireland.

Bluebell moth↗

PubMed2026

The chromosomal genome sequence of the maze coral, Meandrina meandrites (Linnaeus, 1758) (Scleractinia: Meandrinidae) and its associated microbial metagenome sequences.

We present a genome assembly from a specimen of Meandrina meandrites (maze coral; Cnidaria; Anthozoa; Scleractinia; Meandrinidae). The genome sequence has a total length of 551.16 megabases. Most of the assembly (99.25%) is scaffolded into 14 chromosomal pseudomolecules. The mitochondrial genome has also been assembled, with a length of 17.2 kilobases. Gene annotation of this assembly by Ensembl identified 30 464 protein-coding genes. We recovered two bins from the metagenome data.

Meandrina meandrites↗

PubMed2026

The genome sequence of the Orange Underwing, Archiearis parthenias (Linnaeus, 1761) (Lepidoptera: Geometridae).

We present a genome assembly from an individual female Archiearis parthenias (Orange Underwing; Arthropoda; Insecta; Lepidoptera; Geometridae). The assembly contains two haplotypes with total lengths of 528.46 megabases and 426.17 megabases. Most of haplotype 1 (99.61%) is scaffolded into 26 chromosomal pseudomolecules, including the W and Z sex chromosomes. Haplotype 2 was assembled to scaffold level. The mitochondrial genome has also been assembled, with a length of 17.24 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Archiearis parthenias↗

PubMed2026

The genome sequence of a blow fly, Melanomya nana (Meigen, 1826) (Diptera: Calliphoridae).

We present a genome assembly from an individual male Melanomya nana (blow fly; Arthropoda; Insecta; Diptera; Calliphoridae). The assembly contains two haplotypes with total lengths of 1 391.98 megabases and 1 424.34 megabases. Most of haplotype 1 (99.62%) is scaffolded into 5 chromosomal pseudomolecules. Haplotype 2 was assembled to scaffold level. The mitochondrial genome has also been assembled, with a length of 27.12 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Diptera↗

PubMed2026

The chromosomal genome sequence of a staghorn coral, Acropora cf.  manni (Scleractinia: Acroporidae).

We present a genome assembly from a colony sample of Acropora cf. manni (staghorn coral; Cnidaria; Anthozoa; Scleractinia; Acroporidae). The assembly contains two haplotypes with total lengths of 459.26 megabases and 489.30 megabases. Most of haplotype 1 (94.39%) is scaffolded into 14 chromosomal pseudomolecules. Haplotype 2 was assembled to scaffold level. The mitochondrial genome has also been assembled, with a length of 18.48 kilobases. Metagenome binning recovered one bacterial bin from the phylum Chlamydiota.

Acropora cf. manni↗

PubMed2026

The genome sequence of the lesser white-fronted goose, Anser erythropus (Linnaeus, 1758) (Anseriformes: Anatidae).

We present a genome assembly from an individual female Anser erythropus (lesser white-fronted goose; Chordata; Aves; Anseriformes; Anatidae). The assembly contains two haplotypes with total lengths of 1 339.88 megabases and 1 168.02 megabases. Most of haplotype 1 (88.67%) is scaffolded into 41 chromosomal pseudomolecules, including the W and Z sex chromosomes. Haplotype 2 was assembled to scaffold level. The mitochondrial genome has also been assembled, with a length of 16.74 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces genomes for eukaryotic species found in Britain and Ireland.

Anser erythropus↗

PubMed2026

The genome sequence of the Eurasian common lizard, Zootoca vivipara (von Jacquin, 1787) (Squamata: Lacertidae).

We present a genome assembly from an individual male Zootoca vivipara (Eurasian common lizard; Chordata; Lepidosauria; Squamata; Lacertidae). The assembly contains two haplotypes with total lengths of 1 424.51 megabases and 1 423.70 megabases. Most of the haplotype 1 assembly (99.49%) and the haplotype 2 assembly (99.42%) are each scaffolded into 18 chromosomal pseudomolecules, including the Z 1 and Z 2 sex chromosomes. The mitochondrial genome has also been assembled, with a length of 17.09 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces genomes for eukaryotic species found in Britain and Ireland.

Eurasian common lizard↗

PubMed2026

The genome sequence of the Silver Colonel, Odontomyia argentata (Fabricius, 1794) (Diptera: Stratiomyidae).

We present a genome assembly from an individual female Odontomyia argentata (Silver Colonel; Arthropoda; Insecta; Diptera; Stratiomyidae). The assembly contains two haplotypes with total lengths of 1 950.48 megabases and 1 937.58 megabases. Most of haplotype 1 (95.92%) is scaffolded into 6 chromosomal pseudomolecules. Haplotype 2 was assembled to scaffold level. The mitochondrial genome has also been assembled, with a length of 17.0 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces genomes for eukaryotic species found in Britain and Ireland.

Diptera↗

PubMed2026

The genome sequence of the Mallow Seed Moth, Platyedra subcinerea (Haworth, 1828) (Lepidoptera: Gelechiidae).

We present a genome assembly from an individual male Platyedra subcinerea (Mallow Seed Moth; Arthropoda; Insecta; Lepidoptera; Gelechiidae). The assembly contains two haplotypes with total lengths of 555.70 megabases and 555.31 megabases. Most of haplotype 1 (99.98%) is scaffolded into 30 chromosomal pseudomolecules, including the Z sex chromosome. Haplotype 2 was assembled to scaffold level. The mitochondrial genome has also been assembled, with a length of 15.25 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces genomes for eukaryotic species found in Britain and Ireland.

Lepidoptera↗

PubMed2026

The genome sequence of the Pale Eggar, Trichiura crataegi (Linnaeus, 1758) (Lepidoptera: Lasiocampidae).

We present a genome assembly from an individual male Trichiura crataegi (Pale Eggar; Arthropoda; Insecta; Lepidoptera; Lasiocampidae). The assembly contains two haplotypes with total lengths of 1 112.64 megabases and 1 115.22 megabases. Most of haplotype 1 (99.87%) is scaffolded into 28 chromosomal pseudomolecules, including the Z sex chromosome. Haplotype 2 was assembled to scaffold level. The mitochondrial genome has also been assembled, with a length of 17.03 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces genomes for eukaryotic species found in Britain and Ireland.

Lepidoptera↗

PubMed2026

The genome sequence of the 16-spot Ladybird, Tytthaspis sedecimpunctata (Linnaeus, 1758) (Coleoptera: Coccinellidae).

We present a genome assembly from an individual male Tytthaspis sedecimpunctata (16-spot Ladybird; Arthropoda; Insecta; Coleoptera; Coccinellidae). The genome sequence has a total length of 355.68 megabases. Most of the assembly (88.7%) is scaffolded into 10 chromosomal pseudomolecules, including the X sex chromosome. The mitochondrial genome has also been assembled, with a length of 18.38 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces genomes for eukaryotic species found in Britain and Ireland.

16-spot Ladybird↗