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Nanometer-scale optical imaging of epitaxially grown GaN and InN islands using apertureless near-field microscopy.

Nanometer-scale chemical imaging of epitaxially grown gallium nitride (GaN) and indium nitride (InN) islands is performed using scattering-type apertureless near-field scanning optical microscopy (ANSOM). The scattering of 633 nm laser radiation is modulated by an oscillating metallic probe, and the scattered radiation is detected by homodyne amplification, followed by high-harmonic demodulation, yielding optical near-field scattering maps with a spatial resolution better than 30 nm. The image contrast between InN and GaN, and the tip-sample distance dependence, can be qualitatively explained by a simple dipole-coupling model. The ANSOM images of InN and GaN also show structures that are absent in the topographic counterpart, and these substructures are explained by the variations of the local dielectric environment of InN and GaN.

Journal Article↗

Probing enantiospecific interactions between proline and an l-glutathione self-assembled monolayer by modulation excitation ATR-IR spectroscopy.

The interaction of proline with self-assembled monolayers (SAMs) of l-glutathione (gamma-glu-cys-gly) on gold was investigated by a combination of attenuated total reflection (ATR-IR) infrared and modulation excitation spectroscopy (MES). The latter technique makes use of phase-sensitive detection of periodically varying signals and allows discrimination between species with different kinetics such as dissolved proline and adsorbed molecules. By applying a convection-diffusion model coupled to adsorption and desorption, it was possible to extract relative adsorption and desorption rates from the experimental data for the two enantiomers of proline, fully accounting for mass transport within the flow-through cell. The results show that, in particular, the desorption kinetics is different for the two enantiomers. Therefore, the l-glutathione SAM can discriminate between enantiomers, d-proline being stronger bound. The IR spectra reveal that upon interaction with proline the adsorbed l-glutathione is protonated at the gly part of the molecule, which, in the absence of proline, is bound to the gold surface as carboxylate. The observed protonation of adsorbed l-glutathione upon interaction with proline goes along with a structural change of the former, which seems to play an important role for enantiodiscrimination.

Glutathione↗

Intervalence-resonant Raman spectroscopy of strongly coupled mixed-valence cluster dimers of ruthenium.

Resonance Raman spectroelectrochemistry (RR-SEC) at -20 degrees C has been performed on the pyrazine-bridged dimer of mu-oxo-centered trinuclear ruthenium-acetate "clusters"--[(dmap)(CO)(mu-OAc)6(mu3-O)Ru3(mu-L(b))Ru3(mu3-O)(mu-OAc)6(CO)(dmap)]n (where dmap = 4-(dimethylamino)pyridine and L(b) = pyrazine-h4 and pyrazine-d4)-in three oxidation states: n = 0, -1, and -2. In the one-electron reduced, "mixed-valent" state (overall -1 charge and a single odd electron; formal oxidation states [II, II, III]-[III, III, II] on the metal centers), the Raman excitation at 800 nm is resonant with a cluster-to-cluster intervalence charge-transfer (IVCT) band. Under these conditions, scattering enhancement is observed for all four totally symmetric vibrational modes of the bridging pyrazine ligand (nu8a, nu9a, nu1, and nu6a) in the investigated spectral range (100-2000 cm(-1)), and there is no evidence of activity in non-totally symmetric vibrations. Resonantly enhanced Raman peaks related to peripheral pyridyl (dmap) ligand modes and low-frequency features arising from the trigonal Ru3O cluster core and the cluster[Ru]-[N]ligand vibrations were also observed in the spectra of the intermediate-valence (n = -1) cluster dimer. The vibrational assignments and interpretations proposed in this work were reinforced by observation of characteristic isotopic frequency shifts accompanying deuteration of the bridging pyrazine. The results reveal that the fully symmetric (A(g)) vibrational motions of the organic bridge are coupled to the nominally metal cluster-to-metal cluster fast intramolecular electron transfer (ET) and provide validation of the near-delocalized description according to a predicted three-site/three-state (e.g., metal-bridge-metal) vibronic coupling model, in which the important role of the bridging ligand in mediating electronic communication and delocalization between charge centers is explicitly considered. Further compelling evidence supporting an extended five-state model, which incorporates the peripheral cluster-bound pyridyl ligands, is also presented.

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Characterization of interactions in aqueous solutions of hydroxyethylcellulose and its hydrophobically modified analogue in the presence of a cyclodextrin derivative.

The formation of associative networks in semidilute aqueous solutions of hydrophobically modified hydroxyethylcellulose (HM-HEC) is dependent on intermolecular hydrophobic interactions. Addition of hydroxypropyl-beta-cyclodextrin (HP-beta-CD) monomers to the system provides decoupling of these associations via inclusion complex formation with the polymer hydrophobic tails. Results from viscosity, polymer NMR self-diffusion, and dynamic light scattering (DLS) measurements show that the hydrophobic interactions in HM-HEC solutions are effectively suppressed when the level of HP-beta-CD addition increases. Small-angle neutron scattering (SANS) results reveal that the large-scale association complexes in HM-HEC solutions are strongly diminished when the concentration of HP-beta-CD rises. The time correlation data obtained from the DLS experiments unveiled the existence of two relaxation modes: one single exponential at short times followed by a stretched exponential at longer times. The fast mode is always diffusive, whereas the slow mode exhibits progressively stronger wavevector dependence as the intensity of the hydrophobic interactions increases. This feature, as well as the accompanying drop of the stretched exponential beta as the HP-beta-CD concentration decreases, is attributed to enhanced hydrophobic interactions and can be well rationalized in the framework of the coupling model of Ngai.

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On enhanced translational diffusion or the fractional Stokes-Einstein relation observed in a supercooled ionic liquid.

From their experimental studies of the supercooled molecular ionic liquid 1-butyl-3-methylimidazolium hexafluorophosphate (BMIM-HFP), Ito and Richert [J. Phys. Chem. B 2006, in press.] found that the Stokes-Einstein and the Debye-Stokes-Einstein laws do not hold. Instead, enhanced translational diffusion or fractional Stokes-Einstein and fractional Debye-Stokes-Einstein relations are observed, just like in nonionic glass-forming liquids, including 1,3-bis(1-naphthyl)-5-(2-naphthyl)benzene, o-terphenyl, and sucrose benzoate. The comprehensive measurements made by Ito and Richert have determined the critical parameters that the coupling model needs to explain the observed fractional Stokes-Einstein and fractional Debye-Stokes-Einstein relations in the supercooled molecular ionic liquid.

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On the surface conductance, flow rate, and current continuities of microfluidics with nonuniform surface potentials.

The characteristics of electrokinetic flow in a microchannel depend on both the nature of surface potentials, that is, whether it is uniform or nonuniform, and the electrical potential distribution along the channel. In this paper, the nonlinear Poisson-Boltzmann equation is used to model the electrical double layer and the lattice Boltzmann model coupled with the constraint of current continuity is used to simulate the microfluidic flow field in a rectangular microchannel with a step variation of surface potentials. This current continuity, including surface conduction, convection, and bulk conduction currents, has often been neglected in the literature for electroosmotic flow with nonuniform (heterogeneous) microchannels. Results show that step variation of ion distribution caused by step variation surface potential will influence significantly the electrical potential distribution along the channel and volumetric flow rate. For the system considered, we showed that the volumetric flow rate could have been overestimated by as much as 70% without consideration of the current continuity constraint.

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Differential inhibition of recombinant bovine GH (rbGH) activity in vitro by in vivo enhancing monoclonal antibodies.

We have previously described the effects of complexing recombinant bovine growth hormone (rbGH) with the in vivo enhancing monoclonal antibodies (Mabs) OA11 and OA15 and the non-enhancing Mab OA14 on the subsequent activity of GH in different tissue culture models. We reported that all of these Mabs caused the inhibition of GH-stimulated Jak-2 tyrosine kinase phosphorylation in the GH responsive pre-adipocyte cell line 3T3-F442A. However, using the mouse myeloid cell line FDC-P1 transfected with the full length ovine GH receptor (GHR), we subsequently found that OA11 and OA14 remained inhibitory with respect to the end point measurement of GH stimulated mitogenesis but that OA15 had no inhibitory effect on GH stimulated mitogenesis in this cell line. In order to correlate longer term mitogenic effects of Mab-GH complexes with signalling events in this transfected cell line model, we now report on the effects of complexing with Mab on the subsequent GH stimulated phosphorylation of Stat5b (signal transducer and activator of transcription). In agreement with our data for the mitogenic activity of GH-Mab complexes, we found that OA11 and OA14 inhibit GH activation of Stat5b but that OA15 is not inhibitory. Further to this, the dose-response effect of both OA11 and OA14 on the GH stimulation of Stat5b in the FDC-P1-oGHR transfected cells correlates with the previously described dose-response effects for both Mabs in the context of GH stimulation of mitogenic effects. We conclude that in this oGHR transfected cell line model, Mab effects on short and long term GH signalling events are tightly correlated. The observation that neither of the in vivo enhancing Mabs--OA11 or OA15--amplifies the response to GH in our transfected cell line model, coupled with the differential nature of Mab effects on GH activity (OA11--inhibition; OA15--no effect) may argue for an in vivo mechanism for enhancement of GH activity.

Animals↗

Modeling the spread of annual influenza epidemics in the U.S.: the potential role of air travel.

The role of air travel in the global spread of influenza has been the subject of a significant body of research, but this question has yet to be explored within the U.S. The goal of this research is to explore whether knowledge of U.S. air travel patterns and volumes leads to better forecasting of epidemics. We report the results of a series of simulations for the 1998-1999 through 2000-2001 influenza seasons using a standard compartmental model coupled with air transportation data. These preliminary results suggest that air travel may play an important role in the spread of annual influenza within the U.S., particularly in cities with large air travel volumes.

Aircraft↗

A crystallographic, EPR and theoretical study of the Jahn-Teller distortion in [CuTp2] (Tp- = tris[pyrazol-1-yl]hydridoborate).

Crystals of the title compound (1) contain two independent, centrosymmetric half-molecules per asymmetric unit. While both of these show Jahn-Teller elongated six-coordinate geometries, the lengths of the elongated Cu-N bonds in the two molecules differ by 0.117(2) A at 30 K. The structure of one of these molecules (molecule A) does not vary with temperature below 350 K. The other molecule (molecule B) shows Cu-N bond lengths that are temperature-dependent between 225 and 375 K, but do not vary further at lower temperature. This indicates a fluxional axis of Jahn-Teller elongation in this molecule at these higher temperatures. Consideration of the thermal parameters in these structures implies that the fluxionality in molecule B is frozen out near 150 K. This conclusion is supported by a Q-band powder EPR study. The d-d transition energies of molecules A and B have been calculated by several density function (DF) methods, including a time-dependent DF calculation. The crystallographic data have been reproduced using the vibronic coupling model of Burgi and Hitchman. This has shown that the different fluxionality regimes for molecules A and B are not a consequence of their different static molecular structures, but rather reflect their different local environments in the crystal.

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The preparation of side chain functionalized analogues of coenzyme Q for protein conjugation studies.

The synthesis of two analogues of CoQ (10 and 13) suitable for conjugation to a peptide or protein, and hence the development of an ELISA immunoassay, is presented. These analogues were synthesized from the protected quinone, 1-bromo-2-methyl-3,4,5,6-tetramethoxybenzene (1), itself prepared from commercially available CoQ-0 (3). Model coupling studies of one of the analogues (10) to N-acetyl-L-lysine methyl ester and a lysine containing dipeptide (N-acetyl-glycine-L-lysine methyl ester) were also undertaken as a first step to monoclonal antibody production.

Molecular Structure↗

Vibrational dynamics of the hydrogen bond in H(2)S-HF: Fourier-transform-infrared spectra and ab initio theory.

The rotationally resolved infrared spectrum of the hydrogen bonded complex H(2)S-HF and of its isotopomer D(2)S-DF in the HF/DF stretching range have been observed in a supersonic jet Fourier-transform infrared (FTIR) experiment and indicate a predissociation lifetime of 130 ps for H(2)S-HF. Complementary spectra taken at a temperature of 190 K in a cell without resolved rotational structure indicate the presence of strong anharmonic couplings between low frequency intermolecular modes and the HF donor stretch mode previously observed in other complexes with heavier acceptor molecules without rotational fine structure. The anharmonic analysis of the hot band progressions and of the rotational data confirm the coupling mechanism. The coupling constants and the absolute frequency of the hydrogen bonded stretch mode are in excellent agreement with theoretical predictions based on adiabatic variational calculations on potential surfaces computed at MP2 and CCSD(T) level. Complementary calculations with a perturbational approach further confirm the coupling model.

Computer Simulation↗

Regulation of inositol trisphosphate-induced membrane currents in Xenopus oocytes by a Jurkat cell calcium influx factor.

The functional interactions of a Jurkat cell-derived calcium influx factor (CIF) with Ins(1,4,5)P3 were examined by microinjection and voltage-clamp recording of current responses in Xenopus oocytes. CIF, which stimulates Ca2+ entry directly on microinjection, was active at dilutions at which it had no direct effect by augmenting both initial rapid Ins(1,4,5)P3-mediated Ca2+ discharge-activated currents and later sustained Ca2+ entry-activated currents. Augmented initial membrane currents were 3-5-fold greater in peak amplitude than currents evoked by injection of the same dose of Ins(1,4,5)P3 alone. The augmented initial response was not decreased by removal of extracellular Ca2+, suggesting that there is potentiation of Ins(1,4,5)P3-mediated discharge from intracellular Ca2+ stores. However, the augmentation of Ins(1,4,5)P3-mediated discharge cannot be due to an enhanced production of endogenous Ins(1,4,5)P3 because maximal Ins(1,4,5)P3-activated currents saturate (approx. 500 nA) with supramaximal levels of Ins(1,4,5)P3 (10-50 microM). Depletion of Ca2+ stores, by pretreatment with thapsigargin or by prior injection with the Ins(1,4,5)P3 receptor antagonist heparin, abolished membrane currents elicited by Ins(1,4,5)P3/CIF co-injection, further suggesting that the Ins(1,4,5)P3 receptor was the target for the initial-current potentiating actions of CIF. In this regard, CIF also induced augmented initial currents with co-injection of either Ins(2,4,5)P3 or Ins(1,3,4,5)P4. The augmentation of Ins(1,4,5)P3-mediated currents by CIF was bell-shaped with regard to Ins(1,4,5)P3 concentration, reminiscent of the regulatory influence of Ca2+ on Ins(1,4,5)P3 responses. Co-injection of Ins(1,4,5)P3 and CIF also augmented (2-3-fold) later current responses arising from sustained Ca2+ entry. The augmented late-current responses were not due to enhanced Ca2+ store depletion because supramaximal levels of Ins(1,4,5)P3 (50 microM) or injection of the poorly metabolized Ins(1,4,5)P3 analogue, Ins(2,4,5)P3, cannot activate the same magnitude of Ca(2+)-entry-dependent currents. These results suggest that CIF at low levels interacts with Ins(1,4,5)P3 to sensitize two pathways of Ca2+ signalling: initial discharge and later Ca2+ entry. Thus under physiological conditions CIF might be more potent as a co-messenger than as a direct Ca2+ entry signal and might provide a novel type of direct feedback regulation between the stores-activated influx pathway and the Ins(1,4,5)P3 receptor. Moreover these results suggest that CIF modulation of the receptor for Ins(1,4,5)P3 may underlie control of both augmentation of discharge and Ca2+ entry, as has been predicted from the conformational coupling model of Ca2+ entry.

Animals↗

Classification of secondary relaxation in glass-formers based on dynamic properties.

Dynamic properties, derived from dielectric relaxation spectra of glass-formers at variable temperature and pressure, are used to characterize and classify any resolved or unresolved secondary relaxation based on their different behaviors. The dynamic properties of the secondary relaxation used include: (1) the pressure and temperature dependences; (2) the separation between its relaxation time taubeta and the primary relaxation time taualpha at any chosen taualpha; (3) whether taubeta is approximately equal to the independent (primitive) relaxation time tau0 of the coupling model; (4) whether both taubeta and tau0 have the same pressure and temperature dependences; (5) whether it is responsible for the "excess wing" of the primary relaxation observed in some glass-formers; (6) how the excess wing changes on aging, blending with another miscible glass-former, or increasing the molecular weight of the glass-former; (7) the change of temperature dependence of its dielectric strength Deltaepsilonbeta and taubeta across the glass transition temperature Tg; (8) the changes of Deltaepsilonbeta and taubeta with aging below Tg; (9) whether it arises in a glass-former composed of totally rigid molecules without any internal degree of freedom; (10) whether only a part of the molecule is involved; and (11) whether it tends to merge with the alpha-relaxation at temperatures above Tg. After the secondary relaxations in many glass-formers have been characterized and classified, we identify the class of secondary relaxations that bears a strong connection or correlation to the primary relaxation in all the dynamic properties. Secondary relaxations found in rigid molecular glass-formers belong to this class. The secondary relaxations in this class play the important role as a precursor or local step of the primary relaxation, and we propose that only they should be called the Johari-Goldstein beta-relaxation.

Journal Article↗

Interspike interval embedding of chaotic signals.

According to a theorem of Takens [Lecture Notes in Mathematics (Springer-Verlag, Berlin, 1981), Vol. 898], dynamical state information can be reproduced from a time series of amplitude measurements. In this paper we investigate whether the same information can be reproduced from interspike interval (ISI) measurements. Assuming an integrate-and-fire model coupling the dynamical system to the spike train, there is a one-to-one correspondence between the system states and interspike interval vectors of sufficiently large dimension. The correspondence implies in particular that a data series of interspike intervals, formed in this manner, can be forecast from past history. This capability is demonstrated using a nonlinear prediction algorithm, and is found to be robust to noise. A set of interspike intervals measured from a simple neuronal circuit is studied for deterministic structure using a prediction error statistic. (c) 1995 American Institute of Physics.

Journal Article↗

The stress diffusion coupling in the swelling dynamics of cylindrical gels.

The swelling dynamics of long cylindrical gel is analyzed by the stress diffusion coupling model [T. Yamaue and M. Doi, Phys. Rev. E 69, 41402 (2004)]. Two situations are analyzed: (i) stress induced swelling, where the swelling is caused by an elongational force applied on the gel, and (ii) free swelling, where the swelling is caused by thermodynamic force. The relaxation times characterizing these processes are calculated. It is shown that earlier calculations for the relaxation time, which are based on some physical or mathematical approximations, give results surprisingly close to the rigorous calculation, but the difference can be still seen experimentally.

Journal Article↗

Two secondary modes in decahydroisoquinoline: which one is the true Johari Goldstein process?

Broadband dielectric measurements were carried out at isobaric and isothermal conditions up to 1.75 GPa for reconsidering the relaxation dynamics of decahydroisoquinoline, previously investigated by Richert et al. [R. Richert, K. Duvvuri, and L.-T. Duong, J. Chem. Phys. 118, 1828 (2003)] at atmospheric pressure. The relaxation time of the intense secondary relaxation tau(beta) seems to be insensitive to applied pressure, contrary to the alpha-relaxation times tau(alpha). Moreover, the separation of the alpha- and beta-relaxation times lacks correlation between shapes of the alpha-process and beta-relaxation times, predicted by the coupling model [see for example, K. L. Ngai, J. Phys.: Condens. Matter 15, S1107 (2003)], suggesting that the beta process is not a true Johari-Goldstein (JG) relaxation. From the other side, by performing measurements under favorable conditions, we are able to reveal a new secondary relaxation process, otherwise suppressed by the intense beta process, and to determine the temperature dependence of its relaxation times, which is in agreement with that of the JG relaxation.

Journal Article↗

Molecular motions of different scales at thin polystyrene film surface by lateral force microscopy.

Lateral force microscopy (LFM) was used to probe the molecular motions at thin polystyrene film surface. The effect of the applied load on the LFM measurements was investigated by presenting both the LFM results and the surface morphology after several scans over the same area. Depending on the loads, the scanning can be nonperturbative (without alternating the surface morphology) or perturbative (patterning the surface). Temperature-dependent LFM measurements were conducted in order to determine the apparent transitions at the surface. Perturbative scans under high loads (e.g., 150 nN) witnessed that the apparent transitions shifted to low temperatures with an increasing scan rate, while the transitions behaved oppositely under lower loads (1, 10, and 20 nN). The heating effect is suggested to account for the behavior under high loads. According to our results from nonperturbative LFM, the apparent glass transition temperature (T(g)s) is more than 10 K lower than the bulk value. Moreover, rate-dependent LFM measurements were performed under 1 nN in order to detect the surface molecular motions. Time-temperature superposition yields a master curve exhibiting three apparent relaxation peaks. The molecular motions at the surface are discussed on the context of the coupling model.

Journal Article↗

Heterodyned fifth-order two-dimensional IR spectroscopy: third-quantum states and polarization selectivity.

A heterodyned fifth-order two-dimensional (2D) IR spectrum of a model coupled oscillator system, Ir(CO)(2)(C(5)H(7)O(2)), is reported. The spectrum is generated by a pulse sequence that probes the eigenstate energies up to the second overtone and combination bands, providing a more rigorous potential-energy surface of the coupled carbonyl local modes than can be obtained with third-order spectroscopy. Furthermore, the pulse sequence is designed to generate and then rephase a two-quantum coherence so that the spectrum is line narrowed and the resolution improved for inhomogeneously broadened systems. Features arising from coherence transfer processes are identified, which are more pronounced than in third-order 2D IR spectroscopy because the transition dipoles of the second overtone and combination states are not rigorously orthogonal, relaxing the polarization constraints on the signal intensity for these features. The spectrum provides a stringent test of cascading signals caused by third-order emitted fields and no cascading is observed. In the Appendix, formulas for calculating the signal intensities for resonant fifth-order spectroscopies with arbitrarily polarized pulses and transition dipoles are reported. These relationships are useful for interpreting and designing polarization conditions to enhance specific spectral features.

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