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Results for “Breeding value”

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PubMed2026

Integrated Genome-Wide Association Studies and Selection Signature Analysis Reveal the Genetic Architecture of the Wattle Trait in Goats.

Wattles are finger-like appendages on the ventral neck of goats, serving as a distinctive morphological marker for breed identification that serves potential implications for production performance. However, their genetic basis remains incompletely characterized. Here, we integrated a genome-wide association study (GWAS) and selection signature analysis to identify candidate genes and genomic regions associated with the wattle trait in goats. Using a linear mixed model, GWAS on 463 goats (23 wattled and 440 non-wattled) identified 385 quantitative trait loci (QTLs) at a 5% false discovery rate, yielding 346 candidate genes. The most significant association signal was observed on chromosome 10 (72.61-73.48 Mb), where the lead SNP (rs636481767) is located within a region containing GJD2, GREM1, and FMN1, showing strong linkage disequilibrium (r2 > 0.6) with surrounding loci. Subsequent selection signature analysis (23 wattled and 23 non-wattled) identified 83 genomic regions harboring 119 candidate genes. The strongest signals were detected at MFSD14B on chromosome 8 (FST = 0.154, log2π-ratio = 2.611) and PDLIM7 on chromosome 7 (FST = 0.144, log2π-ratio = 0.806). KEGG pathway enrichment analysis revealed that GWAS-associated genes were involved in glycosylation and immune responses, whereas selection-signature genes were enriched in DNA repair and the Hippo, Notch, and Wnt pathways. Furthermore, cross-species PheWAS revealed that human FMN1 is associated with dermatological, skeletal, and metabolic phenotypes, while porcine FMN1 is associated with backfat thickness and loin muscle depth. Overall, this study provides molecular markers of potential value for goat breeding and pinpoints key candidate genes for future functional validation of wattle development.

Animals↗

PubMed1991

Leukocyte profile in growing dwarf and landrace kids.

Total and differential leukocyte count profiles were studied in 62 clinically healthy Danish landrace kids and 34 clinically healthy dwarf kids from birth to 12 months of age in seven Danish herds. The objective was to determine the reference values in the two breeds and the influence of age, sex and environment and whether there are any breed differences. Parametric (mean +/- 2 standard deviations) and the nonparametric (5th to 95th percentile interval) values for each leukocyte type were closely related. The medians were very close to the means. The number of leukocytes was low in neonates, 7.1 +/- 1.5 and 7.0 +/- 2.1 x 10(9)/l in dwarf and landrace kids respectively. Values increased with age to 18.7 +/- 2.1 and 13.4 +/- 3.1 x 10(9)/l in the two breeds respectively at 8-12 months of age. There were significant differences in leukocyte counts between the breeds at 1-2 and 8-12 months of age and at 2-4 months between herds within the breeds. The number of lymphocyte and neutrophil cells were 2.6 +/- 0.8 and 3.9 +/- 1.1 x 10(9)/l respectively in neonatal dwarf and 4.1 +/- 1.5 and 2.3 +/- 1.1 x 10(9)/l respectively in landrace kids. Very high numbers of these cells were observed in dwarf and landrace kids respectively within 8 months, 10.7 +/- 1.1 and 8.2 +/- 3.3 lymphocytes and 6.8 +/- 1.7 and 4.4 +/- 2.6 x 10(9)/l neutrophils for the two breeds. Significant differences between the ages (within the breeds), breeds (within similar ages) and herds (within breeds in kids of similar ages) were observed.(ABSTRACT TRUNCATED AT 250 WORDS)

Aging↗

PubMed1976

[Blood picture of beagle dogs of Czechoslovak breeding].

In this paper the individual values of the blood picture were determined in 60 dogs of the beagle breed of the age of one to two years, of the live weight of 15-18 kg, of Czechoslovak breeding, which were used for experimental purposes. It was found that in the examined group of dogs the different hematological parameters did not almost differ from the findings stated in various literary sources and that they corresponded fully to the standard values for dogs.

Animals↗

PubMed1993

A comparative study of annual changes in the pineal gland morphology with reference to the influence of melatonin on testicular activity in tropical birds, Psittacula cyanocephala and Ploceus philippinus.

The aim of the present comparative investigation was to examine annual pineal cytological changes and the action of melatonin in relation to testicular activity in two wild tropical avian species. The findings revealed that in both blossomheaded parakeets (Psittacula cyanocephala) and Indian weaver birds (Ploceus philippinus) the pineal gland was inactive, with reduced karyometric values during the breeding season. A pinealoactive phase showing significantly increased pinealocyte nuclear diameter corresponded with the nonbreeding phase. Administration of melatonin (250 micrograms/100 g body wt) for 10 consecutive days caused significant involution of testes during the breeding phase, although it failed to alter reproductive activity during the nonbreeding phase. The results indicated that the pineal gland activity varied inversely with the seasonal testicular weight cycle and the antigonadal influence of melatonin appeared to be phase dependent, which corroborated the inverse temporal relationship of the pineal gland and male reproductive activity examined in the two tropical avian species.

Acclimatization↗

PubMed2004

Cassava biology and physiology.

Cassava or manioc (Manihot esculenta Crantz), a perennial shrub of the New World, currently is the sixth world food crop for more than 500 million people in tropical and sub-tropical Africa, Asia and Latin America. It is cultivated mainly by resource-limited small farmers for its starchy roots, which are used as human food either fresh when low in cyanogens or in many processed forms and products, mostly starch, flour, and for animal feed. Because of its inherent tolerance to stressful environments, where other food crops would fail, it is often considered a food-security source against famine, requiring minimal care. Under optimal environmental conditions, it compares favorably in production of energy with most other major staple food crops due to its high yield potential. Recent research at the Centro Internacional de Agricultura Tropical (CIAT) in Colombia has demonstrated the ability of cassava to assimilate carbon at very high rates under high levels of humidity, temperature and solar radiation,which correlates with productivity across all environments whether dry or humid. When grown on very poor soils under prolonged drought for more than 6 months, the crop reduce both its leaf canopy and transpiration water loss, but its attached leaves remain photosynthetically active, though at greatly reduced rates. The main physiological mechanism underlying such a remarkable tolerance to drought was rapid stomatal closure under both atmospheric and edaphic water stress, protecting the leaf against dehydration while the plant depletes available soil water slowly during long dry periods. This drought tolerance mechanism leads to high crop water use efficiency values. Although the cassava fine root system is sparse, compared to other crops, it can penetrate below 2 m soil,thus enabling the crop to exploit deep water if available. Leaves of cassava and wild Manihot possess elevated activities of the C4 enzyme PEP carboxylase but lack the leaf Kranz anatomy typical of C4 species, pointing to the need for further research on cultivated and wild Manihot to further improve its photosynthetic potential and yield,particularly under stressful environments. Moreover, a wide range in values of Km (CO2) for the C3 photosynthetic enzyme Rubisco was found among cassava cultivars indicating the possibility of selection for higher affinity to CO2, and consequently higher leaf photosynthesis. Several plant traits that may be of value in crop breeding and improvement have been identified, such as an extensive fine root system, long leaf life, strong root sink and high leaf photosynthesis. Selection of parental materials for tolerance to drought and infertile soils under representative field conditions have resulted in developing improved cultivars that have high yields in favorable environments while producing reasonable and stable yields under stress.

Adaptation, Physiological↗

PubMed1981

Dominant lethal mutations in Tilapia mossambica (Peters) elicited by myleran.

Tilapia mossambica (Peters) Teleostei, Cichlidae, is of commercial importance being farmed for human consumption. An effective means of sterilization would be of value since prolific breeding under farming conditions reduces growth rate. The possibility of using the antileukaemic drug myleran as a chemosterilant has been investigated previously, however the present study indicated that it can induce dominant lethal mutations in this species.

Animals↗

PubMed2004

Diagnosis of feline haemoplasma infection in Australian cats using a real-time PCR assay.

A total of 147 cats from the Sydney area of Australia that had blood samples submitted to veterinary laboratories were tested using a real-time polymerase chain reaction (PCR) assay able to detect and distinguish the two feline haemoplasma species. This sample number included two cats diagnosed with feline haemoplasma infection by routine blood smear examination. Statistical analysis was performed to evaluate associations between haemoplasma infection, age, sex, breed, haematocrit (HCT) values and anaemia status. One hundred and six cats (72.1%) were negative. Thirty-four cats (23.1%) were positive for 'Candidatus M. haemominutum', six cats (4.1%) were positive for M. haemofelis and one cat (0.7%) was positive for both species. Older, male, non-pedigree cats, with lower HCT values were more likely to be infected with 'Candidatus M. haemominutum'. Significant inverse correlation was found between the amount of M. haemofelis DNA present in the blood and the HCT value. This report documents the existence of, and prevalence of, both haemoplasma species in a sample of cats in Australia and is the first to use quantitative real-time PCR in a prevalence study for haemoplasma infection.

Age Factors↗

PubMed1999

Towards evaluating the economic impact of bovine neosporosis.

In spite of the global importance of neosporosis as a cause of bovine abortion, there is very little information about its economic consequences. The economic costs are a product of estimations of the quantity of the effects attributable to Neospora infection, and the particular unit costs of those effects. In this brief review, which arose from a workshop on the economics of coccidiosis held at the COST 820 meeting, Toledo 1998, we discuss the possible effects of neosporosis which are of economic significance and summarise the available estimates of their magnitude to provide a basis for further economic analysis. Neospora infection has been associated with abortion, increased culling and reduced milk yield. In addition, it has been diagnosed in cases of stillbirth and neonatal mortality, it is likely to contribute to early foetal death and resorption and it is responsible for a reduction in the value of female breeding cattle. In quantifying the role of Neospora, it is important that epidemiologically based, case-controlled studies are conducted because, given the extreme efficiency with which bovine Neospora infection is vertically transmitted, demonstration of prevalence of infection in affected animals (including foetuses) is not a true indicator of the significance of this disease. Relatively few epidemiological studies have been conducted, but in investigations in the USA, Holland and Britain, infected cows have been shown to be about three times more likely to abort than non-infected cattle. In the UK this approach has been used to estimate the proportion of abortions in the national dairy population which may be attributable to Neospora caninum.

Abortion, Veterinary↗

PubMed1999

Determining the sex of bovine embryos using polymerase chain reaction results: a six-year retrospective study.

Knowing the sex of embryos produced for use in an embryo transfer program can assist the dairy producer in managing his resources more effectively. A reliable procedure for accomplishing this goal is to apply PCR technology to the biopsy of an embryo. A description is provided of how the technique has been applied on a large scale in a commercial setting in western Canada between 1992 and 1997. A total of 4,183 embryos was biopsied over a 6-yr period. The sex was determined with more than 90% of the embryos. The results showed that there was a seasonal variation in the sex ratio, with more females being recorded in the period of least light (October to March), than in April to September. While both sire and embryo quality affected the sex ratio, the differences were too small to be of value in most breeding programs. Pregnancy rates with fresh sexed embryos (58 to 71%) were comparable to those with fresh unsexed embryos. The results following freezing and thawing of sexed embryos were low (37 to 66%) but sufficient to be viable commercially. When the sex assigned by PCR was verified by fetal sexing at 60 d of gestation, the error rate was 7%. This study demonstrates that sexing of embryos can be carried out on a large scale. Demand for quick, reliable determination of sex can be met in a cost effective manner. The pregnancy rates achieved with embryos after biopsy are suitable for use in a commercial setting.

Animal Husbandry↗

PubMed2000

Differential allocation: tests, mechanisms and implications.

Differential allocation occurs when reproductive investment is influenced by mate attractiveness. Recently, wide-ranging empirical support for differential allocation has been obtained. These data suggest that mates can affect the payoffs from reproduction, thus making sacrifices of reproductive value worthwhile when breeding with an attractive mate. As an example of an adaptive parental effect, the existence of differential allocation has some interesting implications for empirical studies of sexual selection and for predicting evolutionary responses to selection.

Journal Article↗

PubMed1999

Introducers and protective sleeves may increase thrombogenicity of pulmonary artery catheters.

OBJECTIVE: To investigate the cause of clot formation on the surface of non-heparin coated/bonded pulmonary artery catheters. DESIGN: A controlled, unblinded, open-labeled study. SETTING: Research laboratory at Tulane School of Medicine, New Orleans, LA. PARTICIPANTS: Rhesus and African Green monkeys. INTERVENTIONS: Anesthetized monkeys (n = 24) were assigned to one of two groups. The first group (group A) had a pulmonary artery catheter inserted into a femoral vein through a cutdown without passage through an introducer or protective sleeve before insertion. In the second group (group B), the pulmonary artery catheter was passed through an introducer and protective sleeve before insertion in the femoral vein. After the study, the animals were returned to the primate breeding colony. Laboratory values were measured for each animal, and electron micrographs were taken of selected pulmonary artery catheters before and after passage of these catheters through the introducer sheath and/or protective sleeve. MEASUREMENTS AND MAIN RESULTS: Between the two groups, there was a significant difference in fibrinogen level, but not in hematocrit, prothrombin time, partial thromboplastin time, and platelet count. Clots were visible on 11 of 12 catheters in group B, which was statistically significant (p < 0.01), compared with only 3 of 12 catheters in group A. The average clot weight was 0.014+/-0.014 g in group A (range, 0.00 to 0.170 g), which was statistically significant (p < 0.01), compared with 0.216 < 0.058 g in group B (range, 0.000 to 0.620 g). Electron micrographs taken after catheters were passed through an introducer and/or protective sleeve showed that both significantly altered the surface of the catheter. The surface of the catheter was smooth and homogenous in appearance before insertion. Conversely, both the introducer and protective sleeve produced marked furrowing and a nodular appearance on the catheter surface, as shown by electron micrographs. CONCLUSION: The data from this study show that the incidence of clot formation and amount of clot formed on the surface of non-heparin-coated pulmonary artery catheters are significantly greater after passage through an introducer and/or protective sleeve. The electron micrographs also show that both introducers and protective sleeves abraded the catheters and were associated with thrombus formation on the catheter. Designing less traumatic valves on these devices is warranted and recommended.

Animals↗

PubMed2003

Urinary steroids, FSH and CG measurements for monitoring the ovarian cycle and pregnancy in the chimpanzee.

Non-invasive methods for monitoring reproductive status of chimpanzee based on the measurement of urinary steroids and gonadotropins were examined. A typical pre-ovulatory urinary estrone conjugate (E1C) surge and post-ovulatory increase in pregnandiol glucuronide (PdG) were seen during the menstrual cycle. Urinary follicle stimulating hormone (FSH) showed two peaks over the infertile menstrual cycle. The earliest changes indicating pregnancy were a coincident rise in E1C and chorionic gonadotropin (CG) levels and a concomitant fall in FSH levels. Urinary PdG levels showed a prolonged rise. Urinary E1C in the pregnant chimpanzee was higher than during the menstrual cycle and increased with advancing gestation, with maximum levels occurring near term. In the case of stillbirth, E1C and CG levels from mid- through late-pregnancy were low and the prepartum progressive increase in E1C was not shown. The data presented here are of great practical value in captive breeding management of chimpanzees.

Animals↗

PubMed2001

Seasonal changes in spermatogenic activity and in plasma levels of FSH, LH and testosterone, and the effect of immunization against inhibin in the male silver fox (Vulpes vulpes).

The cellular composition of the silver fox testis assessed by DNA flow cytometry and histological analysis exhibited marked circannual alterations. The proportion of haploid cells increased from late October to the breeding season in February, while that of diploid cells decreased and that of tetraploid cells fluctuated during the same period. Towards the end of March these changes were reversed. The seasonal variations in testicular histology paralleled the changes in distribution of cells from the different DNA populations. In August, 69% of the tubules contained spermatogonia as the only type of germ cell, while the remaining 31% also contained a few primary spermatocytes. In late October more than 50% of the tubules contained spermatocytes, and during the period of further activation from early December-February the seminiferous epithelium included round and/or elongated spermatids as well. In February, all tubules contained complete associations of germ cells, whereas in late March tubules with spermatogonia only and spermatogonia together with a few spermatocytes reappeared. In May, only such tubules could be found indicating total regression. Plasma concentrations of FSH and LH increased from early November, both gonadotrophins reaching maximum levels in December or early January, and then both declined during the second part of January, immediately prior to the actual breeding season. LH values showed a few smaller peaks in the beginning of June, whereas FSH levels were generally low until the next period of testicular reactivation. Testosterone concentrations were also low during most of the year but rose in November and December to reach a peak in January and a second peak in June. In animals immunized against inhibin the distribution of haploid, diploid and tetraploid cells did not deviate to any great extent from that in the controls, except in March when the immunized males had a markedly lower proportion of tetraploid cells, and in May, when they had a distinctly higher proportion of haploid cells. These findings were partly reflected by the histology. In the immunized animals, plasma FSH levels started to increase at approximately the same time but peaked higher and remained elevated almost 1 month longer than in the controls, whereas both the rise and decline in LH levels generally coincided with the variations in these animals, but the values were mostly higher. The testosterone profiles were similar to those in the controls except that the maximum values were also usually higher.

Animals↗

PubMed1994

Systems for production of calves from cultured bovine embryonic cells.

The development of totipotent bovine embryonic cell cultures has great value in cattle breeding. They provide: (1) a mechanism for making large numbers of clonal offspring by nuclear transfer; (2) an efficient gene transfer system through the use of selectable markers to select transgenic cells; and (3) a mechanism for site-specific gene transfer or deletion by homologous DNA sequence recombination. Bovine embryonic cell cultures have been established from blastocyst inner cell mass (ICM) cells, morulae and the precompaction 16-20-cell stage. All have exhibited similar morphology to mouse embryonic stem (ES) cells, pluripotency on differentiation and proliferation in culture. Culture systems have consisted of microdrop loose suspension short-term cultures or long-term cultures on bovine or murine fibroblast feeder layers, in either a microdrop or a culture dish. The relative merit of culture systems or media requirements for mitosis and prevention of differentiation have not been determined. At present, totipotency is also unknown for cultured cells of the 16-20-cell stage. For cultured ICM cells, totipotency was demonstrated by the birth of four calves from ICM cells cultured 27 days or less in a loose suspension microdrop. Advanced pluripotency and perhaps totipotency was demonstrated in one fetus in a recently reported study where morulae cells cultured in vitro were chimaerized with non-cultured cells. DNA fingerprinting to associate cell lines with offspring and karyotyping to ascertain chromatin normalcy is important in ES cell research. Data pertaining to the use of each are presented.

Animals↗

PubMed2006

Opinion piece: genomics and crop plant science in Europe.

Recent report reviews and funding initiatives in the field of plant genomic research are considered in the context of their translation into practical and economic value via plant breeding. It is concluded that there is a deficit in investment and that a change in working styles towards knowledge sharing and connectivity is required.

Breeding↗

PubMed2000

Discriminant and multiple regression analysis of anemia and opportunistic infection in Fell pony foals.

A condition resembling acquired immunodeficiency with anemia has been described in British Fell pony foals. The pathogenesis is unknown. The present study involved 322 foals of which 164 were of Fell breed and 12 were affected. Discriminant and multiple regression analyses were used to test the results of all clinical pathology parameters from these foals for statistical association with (1) breed origin and (2) presence of disease. Only hematocrit associated significantly with presence of disease. However, significant associations were found with Fell breed origin, including serum albumin concentration and lymphocyte count. The unexpected discovery of sporadic lymphocytosis in the breed indicates the value of this kind of analysis and may be evidence that Fell foal immunodeficiency is associated with retroviral infection.

Journal Article↗

PubMed1999

Gene discovery and product development for grain quality traits.

The composition of oils, proteins, and carbohydrates in seeds of corn, soybean, and other crops has been modified to produce grains with enhanced value. Both plant breeding and molecular technologies have been used to produce plants carrying the desired traits. Genomics-based strategies for gene discovery, coupled with high-throughput transformation processes and miniaturized, automated analytical and functionality assays, have accelerated the identification of product candidates. Molecular marker-based breeding strategies have been used to accelerate the process of moving trait genes into high-yielding germplasm for commercialization. These products are being tested for applications in food, feed, and industrial markets.

Biotechnology↗

PubMed1989

Semen characteristics of vervet monkeys.

Semen samples (91) from 47 vervet monkeys were collected by electroejaculation over a 2 year period. Seventy-eight of these were from 37 singly caged males of unknown fertility and 13 from 10 breeding males of known fertility. Mean values for semen characteristics of the singly caged males were: volume 0.45 ml, pH 7.8, concentration 184 x 10(6)/ml, forward progression rating 2.95 (scale 0-4), motility 55.4%, live 68% and abnormal morphology 3.5%. Mean values for semen characteristics for the breeding males were: volume 0.86 ml, pH 9.00, concentration 117.15 x 10(6)/ml, forward progression rating 3.00 (scale 0-4), motility 43.6%, live 53.3% and abnormal morphology 6%. Semen volumes in the singly caged males were lower than the volumes reported in other studies.

Animals↗