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At least 685 records · Page 38Linked to original sources
PubMed2006

Management of dead bodies as a component of psychosocial interventions after the tsunami: a view from Sri Lanka.

Even if predicted, disasters may not be completely averted due to reasons beyond human control. There is always likely to be a degree of loss, human as well as material. Therefore, the correct strategy is to limit the damage and minimize the harm. Such damage control exercises should be mindful about the psychological costs of the disaster. Identification of dead bodies and the missing, as well as providing a dignified burial, is a crucial part of the overall management of a disaster. It will alleviate the long-term psychological as well as legal consequences. Hence, a comprehensive forensic service including modern genetic capabilities is a must for disaster response. Development of a comprehensive and efficient psychosocial intervention at community level after a disaster should recognise the importance of dead body management as an integral part of it. The guiding principles of psychosocial interventions are: to be multi-sectoral and multi-level; to include immediate, mid-term and long-term interventions; to be socially and culturally sensitive; to recognize the functionality of existing social and healthcare systems; to adopt a public mental health approach; and to be informed by evidence-based planning and implementation proven to be locally effective.

Cadaver↗
PubMed1998

De novo mutations and allelic diversity at minisatellite locus D7S22 investigated by allele-specific four-state MVR-PCR analysis.

We have studied the allelic diversity and de novo mutations at the hypervariable minisatellite locus D7S22. A four-state minisatellite variant repeat unit mapping by PCR (MVR-PCR) method was developed for this purpose, and a substitution polymorphism close to the repeat array was used to design allele-specific flanking primers to study individual haplotypes in genomic DNA. A total of 150 alleles from different allele size groups and flanking haplotypes were mapped. On average, MVR-codes extending 65 repeats (2.4 kb) into the repeat array were obtained. The interspersion patterns of variant repeats were highly polymorphic. However, subgroups of alleles close in size and with identical flanking haplotype revealed common MVR-code characteristics indicating a close evolutionary relationship. Unlike the situation in many other hypervariable minisatellites, no polarized variability was revealed at this minisatellite locus. Fifty four small families with D7S22 de novo mutations were analysed by MVR-PCR. The sites where the length change occurred were revealed in 22 cases, while in 32 cases the mutation obviously occurred further into the repeat array. In agreement with a non-polar distribution of the allelic variation, there was no evidence for a hypermutable hot spot for mutation within the repeat array. Comparison of MVR-codes in the mutant and progenitor in gain mutations indicated that at least one, possibly four cases, reflected inter-allelic events. Together with evidence from DNA sequencing of alleles of <2 kb, this indicates that as many as half of the gain mutations might be inter-allelic events in D7S22. Based on these results, different factors which might affect the mutation rate are discussed.

Alleles↗
PubMed2000

Rapid, high fidelity analysis of simple sequence repeats on an electronically active DNA microchip.

We describe a method for the discrimination of short tandem repeat (STR) alleles based on active microarray hybridization. An essential factor in this method is electronic hybridization of the target DNA, at high stringency, in <5 min. High stringency is critical to avoid slippage of hybrids along repeat tracts at allele-specific test sites in the array. These conditions are attainable only with hybridization kinetics realized by electronic concentration of DNA. A sandwich hybrid is assembled, in which proper base stacking of juxtaposed terminal nucleotides results in a thermodynamically favored complex. The increased stability of this complex relative to non-stacked termini and/or base pair mismatches is used to determine the identification of STR alleles. This method is capable of simultaneous and precise identification of alleles containing different numbers of repeats, as well as mutations within these repeats. Given the throughput capabilities of microarrays our system has the potential to enhance the use of microsatellites in forensic criminology, diagnostics and genetic mapping.

Alleles↗
PubMed2001

STRBase: a short tandem repeat DNA database for the human identity testing community.

The National Institute of Standards and Technology (NIST) has compiled and maintained a Short Tandem Repeat DNA Internet Database (http://www.cstl.nist.gov/biotech/++ +strbase/) since 1997 commonly referred to as STRBase. This database is an information resource for the forensic DNA typing community with details on commonly used short tandem repeat (STR) DNA markers. STRBase consolidates and organizes the abundant literature on this subject to facilitate on-going efforts in DNA typing. Observed alleles and annotated sequence for each STR locus are described along with a review of STR analysis technologies. Additionally, commercially available STR multiplex kits are described, published polymerase chain reaction (PCR) primer sequences are reported, and validation studies conducted by a number of forensic laboratories are listed. To supplement the technical information, addresses for scientists and hyperlinks to organizations working in this area are available, along with the comprehensive reference list of over 1300 publications on STRs used for DNA typing purposes.

Databases, Factual↗
PubMed2002

Personal identification from human remains by mitochondrial DNA sequencing.

The authors report four cases in which severely damaged human remains were identified by mitochondrial DNA (mtDNA) sequencing. Degraded DNA was extracted from highly adipoceratous tissues using the phenol-chloroform method and polymerase chain reaction amplified for sequencing of two hypervariable regions, hypervariable region 1 and hypervariable region 2, of mitochondrial DNA. They also sequenced these regions of blood samples that were obtained from the presumptive mother or sister of the human remains. The sequencing results were compared with each other and with the Anderson's sequence. It was concluded from the sequence data that a lower part of a body in case 1 and some organs in case 2 were from the same woman, and a human head in case 3 and a female body in case 4 were from the relative of a presumptive mother and a sister, respectively.

Adult↗
PubMed2000

Challenges of toxicology for the millennium.

In meeting the challenges of toxicology, clinical and forensic toxicologists should expand their services and engage in research and development to meet changing needs. Expanding roles could potentially derive from the threat of terrorism, genotyping for interpretation of potential toxic drug interactions, and criminalistic testings. At the threshold of the next millennium, terrorism via weapons of mass destruction (WMD) has migrated from the war zones to civilian settings. These WMD may be in the form of nuclear, biological, and chemical devices (NBC). Recently, the possible use of chemical/biological weapons in the Middle East conflicts, the use of sarin in a Tokyo subway station, and the unregulated availability of nuclear fuel in some countries all have heightened the potential for international and domestic NBC. In preparation for NBC, both government and civilians in major American cities have been trained for safe handling of patients and casualties. Forensic and clinical toxicologists should be knowledgeable about the clinical pharmacology, safe samples processing, and possible screening and/or analysis of samples exposed to or containing: vesicants; cyanide; and nerve, riot control, and pulmonary agents. These samples may be transported for further analysis and confirmed by designated central laboratories. In criminal/correctional settings, toxicologists should engage in quality assurance and consultation with attorneys, judges, and correctional professionals. With the emergence of pharmacogenetics, genotyping may enhance rational drug therapy for enhanced patient care, and may explain adverse or fatal drug reactions in postmortem analysis.

Animals↗
PubMed2006

A simple and inexpensive molecular method for sexing and identification of the forensic samples of elephant origin.

The population of the Asian elephant is being dramatically reduced due to poaching of the ivory from the male. As poaching occurs in remote forests, it often takes weeks or longer for it to be discovered and it is therefore often very difficult to determine the sex of the decomposed body. Data suggest that in the recent past, over 2000 male elephants have been poached in South India. We have developed a technique based on molecular markers to determine that the carcass is an elephant and that it is a male. Using DNA sequence information from Genbank, we have developed two primer pairs: one for the mitochondrial DNA (mtDNA) and the other for the sex-determining region of Y chromosome (SRY) gene of the Indian elephant. After PCR amplification of known elephant DNA, we found that the mtDNA was common in both males and females, whereas the SRY-specific amplicon was observed only in the male.

Animals↗
PubMed1987

Disease diagnosis by recombinant DNA methods.

Recombinant DNA procedures have now been applied to the problem of the identification of molecular defects in man that account for heritable diseases, somatic mutations associated with neoplasia, and acquired infectious disease. Thus recombinant DNA technology has rapidly expanded our ability to diagnose disease. Substantial advances in the simplification of procedures for diagnostic purposes have been made, and the informed physician has gained in diagnostic accuracy as a consequence of these developments. The wide application of recombinant DNA diagnostics will depend on simplicity, speed of results, and cost containment.

Alleles↗
PubMed2000

Demystified ... microsatellites.

Microsatellite DNA sequences consist of relatively short repeats of one to five base pair units; together with satellites and minisatellites they comprise a larger family known as tandemly repetitive sequences. Microsatellites are found both in prokaryotes and eukaryotes, including humans, wherein they appear scattered almost at random throughout the genome. Although in prokaryotes distinct biological functions have been demonstrated, the role of microsatellites in eukaryotes is less clear. Nevertheless, several interesting hypotheses exist suggesting that certain microsatellites may exert subtle influences on the regulation of gene expression. Although the presence of these subtle mechanisms may be beneficial to a whole population, when they go wrong, as is thought to happen in the case of human trinucleotide repeat associated diseases, such as Huntington's disease, the consequences for the individual can be fatal. Most human microsatellites probably have no biological use at all; however, they are extremely useful in such fields as forensic DNA profiling and genetic linkage analysis, which can be used to search for genes involved in a wide range of disorders. With a primary focus on humans, it is the aim of this review to present an up to date discussion, both of the biological aspects and scientific uses of microsatellite sequences. In the latter case, basic theoretical and technical points will be considered, and as such it may be of use both to laboratory and non-laboratory based readers.

Genetic Markers↗
PubMedDate not supplied

An improved method for determining telomere length and its use in assessing age in blood and saliva.

BACKGROUND: It is disputed whether telomeres shorten with age. OBJECTIVE: The proposition of this study was to answer this question. METHODS: The question was answered by a simple method consisting of a color reaction combined with long-term electrophoresis and weak voltage. RESULTS: The telomeres shorten and the shortening is much higher than previously assumed. CONCLUSION: The telomere theory of ageing and cancer is corroborated and for the first time it is possible to estimate age in blood or saliva.

Adolescent↗
PubMed1990

Minisatellite DNA profiles: rapid sample identification in linkage analysis.

Locus-specific minisatellite probes detect multiple alleles with heterozygosities of greater than 90% when hybridised to HinfI and AluI restriction digests of human DNA. We have hybridised 4 of these probes to a panel of DNAs digested with 6 of the restriction enzymes which commonly reveal di-allelic polymorphisms in the human genome. All 6 enzymes detected multiple resolvable alleles with at least 1 of the 4 minisatellite probes tested, thus providing a rapid and efficient means to check family relationships and paternity on filters already being used for linkage analysis.

Blotting, Southern↗