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PubMed1985

A theory and a model for interpreting the proton nuclear magnetic resonance spectra of water in plant leaves.

Some plant leaves display complex, orientation-dependent, proton nuclear magnetic resonance (1H NMR) spectra. The spectral patterns vary as the angle between the leaf surface and the applied magnetic field is varied. They also vary with temperature and with the quantity of absorbed manganous ions, but they are independent of magnetic field strength. In this paper, we propose a theory to explain the origin of the spectra and a model from which the patterns can be calculated. The theory shows how heterogeneous magnetic susceptibilities and local dipolar magnetic fields in chloroplasts can shift the water-proton resonance field. The model describes a simplified leaf structure in which the chloroplasts are nonrandomly aligned with respect to the leaf surface. Model calculations are tested by comparison with experimental spectra from hawthorn leaves (Crataegus sp.).

Magnetic Resonance Spectroscopy↗

PubMed2003

Geometrical and dosimetrical characterization of the photon source using a micro-multileaf collimator for stereotactic radiosurgery.

A micro-multileaf collimator (microMLC) for stereotactic radiosurgery is used for determination of the spatial intensity distribution of the photon source of a linear accelerator. The method is based on grid field dose measurements using film dosimetry and is easy to perform. Since the microMLC does not allow 'direct' imaging of the photon source, special software has been developed to analyse grid field measurements. Besides the source-density function, grid field analysis yields the position of the focal spot in the room laser coordinate system of the linear accelerator and the position of the treatment head rotation axis and the inclination angle of the leaf bank. Thus the method can be used for base dosimetry and for quality assurance in radiosurgery using a microMLC.

Algorithms↗

PubMed1992

Canopy photosynthesis and respiration of kiwifruit (Actinidia deliciosa var. deliciosa) vines growing in the field.

Net CO(2) assimilation (A) for canopies of kiwifruit (Actinidia deliciosa var. deliciosa) vines enclosed in a whole-canopy cuvette was measured continuously for three periods of 15-20 days during late summer, near Hamilton, New Zealand (latitude 38.2 degrees S). Canopy A showed an asymptotic response to incident radiation (PAR), saturating at about 1300 micromol m(-2) s(-1) for one vine and about 800 micromol m(-2) s(-1) for two other vines. Radiation interception at low solar angles and low leaf area apparently limited the response of A to PAR. Radiation saturated rates of A were 25-30 micromol CO(2) m(-2) s(-1) for one vine, and 12-18 micromol CO(2) m(-2) s(-1) for two other vines. At any PAR, canopy A was often lower in the afternoon than in the morning. Canopy respiration averaged 8.9 micromol CO(2) m(-2) s(-1) at 12 degrees C, but increased only 24-34% over the range 7-17 degrees C. Net daily C gains for the whole canopy, calculated as the temporal integral of A, ranged from -0.8 g C m(-2) for a cloudy day (PAR </= 450 micromol m(-2) s(-1)) to 6.2 g C m(-2) for a day with intermittent cloud. Measurements of gas exchange for single leaves in a leaf cuvette were used to examine the basis of the whole-canopy responses to environmental variables. Partial stomatal closure due to water stress apparently contributed to the afternoon depressions in A, although non-stomatal limitations may also have been involved.

Journal Article↗

PubMed2005

A method for determining the gantry angle for megavoltage cone beam imaging.

Accurate knowledge of gantry angle is essential in megavoltage cone beam imaging (MVCBI) with an electronic portal imager. We present a method for determining the gantry angle by detecting multileaf collimator (MLC) leaf positions in projection images. During image acquisition the gantry moves continuously and the MLC operates in dynamic arc mode. Our algorithm detects the leaf positions in the images and compares them with a stationary reference leaf. Comparison of the algorithm against angles determined from the locations of fiducial markers shows the accuracy (0.26 degrees rms error) to be sufficient for MVCBI.

Algorithms↗

PubMed1996

Effects of blue, red, and blue/red lights of two different PPF levels on growth and morphogenesis of lettuce plants.

To clarify the possibility of plant production under red and blue monochrome light using light emitting diodes (LEDs), the effects of light quality and photosynthetic photon flux (PPF) on the growth and morphogenesis of lettuce plants were examined. Lettuce plants were hydroponically grown for 20 days, under 3 different light qualities (Red, Blue and Red/Blue) and 2 PPF levels (about 85 and 170 micromoles/m2/s) for a l6hr day and an 8hr night cycle, at a temperature range of 20 to 22 degrees C. Irrespective of the two different PPF levels, the plants grown under the red LEDs developed more leaves than the plants under the blue LEDs, but less leaves than the plants under blue/red light. The curvature rate of the leaf margin in the plants grown under the blue LEDs was less than that of the plants under red LEDs on both PPF levels. The inclination angle of the seventh leaf in the plants grown under the blue LEDs and the blue/red fluorescence lamps was greater than that of the plants under red LEDs on the high PPF level. The whole plant dry weight was greater in the plants grown under the high PPF level than the plants under a low PPF level.

Biomass↗

PubMed2000

Plant-Microbe Interactions: Wetting of Ivy (Hedera helix L.) Leaf Surfaces in Relation to Colonization by Epiphytic Microorganisms.

Leaf wettability, cuticular wax composition, and microbial colonization of upper and lower leaf surfaces of ivy (Hedera helix L.) was investigated for young and old leaves sampled in June and September. Contact angles of aqueous buffered solutions measured on young leaf surfaces ranged between 76° and 86° and were not dependent on the pH value of the applied droplets. Contact angles measured on old leaf surfaces were up to 32°, significantly lower than on young leaf surfaces. Furthermore, contact angles were significantly lower using aqueous solutions of pH 9.0 compared to pH 3.0, indicating the influence of ionizable functional groups on leaf surface wetting properties. Observed changes in leaf wetting properties did not correlate with different levels of alkanoic acids in cuticular waxes. However, microscopic examination of the leaf surfaces indicated the influence of epiphytic microorganisms on wetting properties of old leaves, since their surfaces were always colonized by epiphytic microorganisms (filamentous fungi, yeasts, and bacteria), whereas surfaces of young leaves were basically clean. In order to analyze the effect of epiphytic microorganisms on leaf surface wetting, surfaces of young and clean ivy leaves were artificially colonized with Pseudomonas fluorescens. This resulted in a significant increase and a pH dependence of leaf surface wetting in the same way as it was observed on old ivy leaf surfaces. From these results it can be deduced that the native wetting properties of leaf surfaces can be significantly masked by the presence of epiphytic microorganisms. The ecological implications of altered wetting properties for microorganisms using the leaf/atmosphere interface as habitat are discussed.

Journal Article↗

PubMed2003

Transmitted and reflected scattering matrices from an English oak leaf.

The complete Mueller matrix for an English oak (Quercus robur) leaf for a fixed azimuth angle (90 degrees) was determined immediately after plucking and a day following exposure to normal room temperature and pressures. The Mueller matrices were determined for transmitted light at observation angles ranging from 0 degrees to 24 degrees and for reflected backscattering angles from 153 degrees to 170 degrees. All the measurements were taken with a He-Ne laser light source at 0.63 microm. Since positive eigenvalues were obtained for the coherence matrix, the polarimetric measurements were physically realizable. The anisotropy parameters were determined from the Jones matrices by use of the decomposition theorem. From the M33 and M44 components of the Mueller matrices, it was found that nonspherical structures within the leaf were primarily responsible for observed transmitted light scatter, and spherical structures were mostly responsible for observed backscatter. Variations in backscatter Mueller matrix elements from a fresh leaf to a second day of observation were assumed because of changes to water vapor concentration in the leaf.

Journal Article↗

PubMed1992

Evaluation of multileaf collimator design for a photon beam.

Various aspects of multileaf collimator (MLC) design are examined relative to clinical requirements. The characteristics studied included: (a) irregular field edge definition or "effective" penumbra, (b) optimum field coverage for the multileaf portion of the field, and (c) leaf velocity. A film dosimetry technique was developed to measure the rapid 2-dimensional change in dose at an edge defined by a multileaf collimator with the segments staggered. The method applies a correction factor which allows for the changing ratio of scattered to primary photons at the field edge so that the energy dependence of the film is corrected. Stepped lead alloy blocks were irradiated with 6 MV photons to obtain films simulating a double-focused multileaf collimator, and the results were compared to films of fields shaped with standard divergent blocks. The effect of the shape of the leaf face (the end of the leaf) on penumbra was also studied. Proper shaping of the leaf ends may eliminate the need to exactly match beam divergence so that the mechanical of the collimator system is simplified. Leaves having several different end shapes and moving horizontally to intercept a vertical beam were compared to the divergent design where a straight face moves along an arc. The measurements showed that the "effective" penumbra (measured as the distance from the 80 to 20% isodose lines) for the multileaf collimator is a function of the angle between the direction of leaf motion and the edge defined by the leaves. In addition, all leaf end shapes showed some increase in penumbra compared to standard divergent blocking and also had increasing penumbra width as they moved over or back from the field center line. A total of 459 treatment fields and six disease sites were examined to determine the percentage of fields potentially shaped by multileaf segments of specified length. This study showed 93% of the fields had lengths of 30 cm or less and 99% had widths of 25 cm or less. A study conducted to determine the required leaf velocity to shape various target volume configurations during complete rotation (at 1 RPM) showed that a leaf speed of at least 1.5 cm/sec at isocenter is needed for dynamic conformal treatment.

Equipment Design↗

PubMed1999

Characterization of the output for helical delivery of intensity modulated slit beams.

The UW tomotherapy workbench utilizes a convolution/superposition based dose calculation and optimization program. It specifies the energy fluence that must be delivered from each leaf for each phantom projection angle. This requires that the spectrum of the radiation emitted from the one-dimensional MLC (multileaf collimator) attached to the linear accelerator be determined. The steps involved in that process are described. The spectrum along the central axis of the slit beam was determined, as well as the softening with off-axis position. Moreover, the magnitude of the energy-fluence output had to be quantified on a per MU (monitor unit) basis. This was done for a single leaf along the central axis of the beam. Factors, which modify that energy-fluence output, were investigated. The output increases with off-axis position due to the horns of the beam. The output for a leaf of interest will also increase if additional leaves are open due to the absence of the tongue-and-groove effect and penumbra blurring. The energy-fluence increase per leaf increase by 4.9% if an adjacent leaf is open. No other factors related to the state of additional leaves were found to significantly increase the energy-fluence output for an individual leaf.

Algorithms↗

PubMed2001

Commissioning of a commercially available system for intensity-modulated radiotherapy dose delivery with dynamic multileaf collimation.

PURPOSE: To commission commercially available equipment for intensity-modulated radiotherapy (IMRT) using dynamic multileaf collimation (DMLC). MATERIALS AND METHODS: First, the stability in leaf positioning and in realized IMRT profiles on a Varian 2300 C/D machine were determined as a function of time and gantry angle, and as a result of treatment interrupts. Second, dose distributions calculated with the CadPlan (Varian) treatment planning system, using leaf trajectories calculated with the leaf motion calculator (LMC) algorithm, were compared with distributions realized at the 2300 C/D unit. RESULTS: Day-to-day and gantry angle variations in leaf positioning and dose delivery were very small (less than 0.1-0.2 mm and 2%). The effect of treatment interrupts on measured dose distributions was less than 2%. The agreement between the final dose distribution calculated by CadPlan and the measured dose was generally within 2%, or 2 mm at steep dose gradients, using a leaf transmission value of 1.8% and a leaf separation value of 2 mm in LMC. For narrow peaks, deviations of up to 6% were observed. LMC does not synchronize adjacent leaf trajectories resulting in tongue-and-groove underdosages of up to 29% for extreme cases. CONCLUSIONS: The 2300 C/D machine is suitable for accurate and reproducible DMLC treatments. The agreement between dose predictions with LMC and CadPlan, and realized doses at this unit is clinically acceptable for most cases. However, differences between calculated and actual dose values may exist in peaked fluences or due to tongue-and-groove effects. Therefore, pretreatment dosimetric verification for each patient is recommended.

Computer Simulation↗

PubMed2003

The effect of leaf width and sampling distance on the "stair-stepping" of field borders defined by multileaf collimators.

Standard multileaf collimators (MLCs) are now available with 1.0 and 0.5 cm leaf widths. The aim of this work is to compare the dose-undulation and effective penumbra of field edges formed by these MLC leaf widths and to determine how reducing the sampling distance (centre-to-centre distance between adjacent MLC leaves) for the 1.0 cm leaf width compares to the smaller leaf width. The undulation of the 50% isodose line and the 80-20% and 80-30% effective penumbra were compared for a field edge angled at 45 degrees to the MLC leaf motion direction at 8 cm depth. The larger leaf width field was also segmented to form field edges with 0.5, 0.33 and 0.2 cm sampling distance. Random setup variation of 2 mm standard deviation was also incorporated. Dose undulation was 1.5 mm for the 0.5 cm MLC leaf width compared to 4.5 mm for the 1.0 cm width. The 80-20% effective penumbra was 2 mm less for the 0.5 cm leaf width and the 80-30% effective penumbra was approximately 3 mm less. When random setup variation was incorporated the 0.5 cm leaf width isodoses were straight compared with approximately 3 mm undulation for the larger MLC. Reducing the sampling distance for the 1.0 cm MLC leaf width to 0.33 cm resulted in penumbra only slightly greater than the 0.5 cm leaf width and removed the undulation. Effective penumbra and dose undulation are reduced for the 0.5 cm leaf width compared to a 1.0 cm leaf width. Reducing the sampling distance for the 1.0 cm MLC leaf can approximate the 0.5 cm leaf width, at the expense of longer treatment times, and increased quality assurance investment.

Computer Simulation↗

PubMed2005

Variation in photosynthetic photon flux density within a tropical seasonal rain forest of Xishuangbanna, south-western China.

The effects of canopy development, solar angle, and weather conditions on temporal variation in photosynthetic photon flux density(PPFD) at three heights within a tropical rain forest canopy in Xishuangbanna, China, were examined. PPFD was measured every second and stored as 10-min averages from 1 December 2002 to 30 November 2003. PPFD variability was examined at three different temporal scales. Specific days in March, September, and December with clear and overcast sky conditions were selected to separate the effects of leaf area index (LAI) and solar angle on diurnal variability. On both clear and overcast days, mean daily average PPFD was significantly different between March and September at all heights, except 10 m on clear days, suggesting that LAI directly influences PPFD. In contrast, the differences in daily average PPFD among three heights between September and December were likely due to variation in solar angle. In addition, daily average PPFD at all locations were significantly lower under overcast than clear sky conditions in March, September and December. Over the year-long study, the mean daily total PPFD at 21 m, 10 m and 4 m was 2.8, 2.7 and 0.7 mol/(m2 x d), which accounted for 9.7%, 9.4% and 2.4% of the daily PPFD above the canopy, respectively. Significant differences in mean daily total PPFD occurred at the same heights among different seasons, and diurnal, day-to-day and seasonal PPFD varied at different heights within the canopy. The possible effects of light variability on physiological and morphological responses of plants are discussed.

China↗

PubMed1986

[Sinus-parenchyma border of the human kidney as the site of origin of intracanalicular and extravascular diffusion of fluids].

Injecting fluids into the kidney against the physiological direction of flow leads to a passage of liquid across the border-line between the renal sinus and the parenchyma. This event, caused by a sudden raising of pressure during the injection is called pyelorenal backflow. It can be divided into a number of subtypes, as there are: pyelocanalicular backflow, pyelosinous backflow, pyelovenous backflow, pyelolymphatic backflow. Among all these phenomena only the pyelocanalicular backflow can be interpreted as a genuine backflow in the fullest sense of the word, while the others never can happen before the fornix had been mutilated. In the case of pyelocanalicular backflow, the contents of the renal pelvis regurgitate into the Ducts of Bellini, but the fluid never goes beyond the collecting ducts in the pyramids. Neither a rupture of the tubuli, followed by an interstitial spreading up to under the capsule, nor a direct penetration into the medullary veins are possible, because the pressure necessary for it causes a rupture of the fornix earlier. This rupture happens step by step as an oblique dissection of the calyx from the papilla. The big calices at the poles show an increased tendency to rupture because they are attached along a line which is shaped like an "8" or like a clover leaf, and so do calices the angle of which is acute. Depending on whether a vein is torn simultaneously with the fornix or not, the contents of the pelvis transflow into the vein (pyelovenous backflow) or into the sinus (pyelosinous backflow). In spite of a previous pyelocanalicular backflow the pelvis is not relieved of pressure to such an extent that there could not occur an additional rupture of the fornix, nevertheless. The pyelosinous backflow leads to a sinus-extravasation which can ascend towards the parenchyma and descend towards the hilum. The ascending sinus-extravasation spreads out within the vascular canals of the kidney. These canals, strictly situated between cortex and medulla, enclose a pyramid (Canales peripyramidales) and contain the interlobar and arcuate bloodvessels. The space between the bloodvessels and the wall of a peripyramidal canal (perivascular space) is filled with connective tissue consisting of 3 components: tunica adventitia of the bloodvessels themselves and fibres originating from the inner capsule and the wall of the calyx. The ascending sinus-extravasation proceeds into the perivascular space by pushing off the bloodvessels from the medulla.(ABSTRACT TRUNCATED AT 400 WORDS)

Adult↗

PubMed2005

Relation between centric slide and Angle's classification.

OBJECTIVE: To compare the difference in sagittal cephalometric analysis in centric occlusion (CO) and in centric relation (CR), among Angle's classes i.e. class I, class II, and class III. DESIGN: Comparative, cross-sectional study. PLACE AND DURATION OF STUDY: Orthodontic Outpatient Department, Karachi Medical and Dental College, Karachi, from July 2003 to December 2004. PATIENTS AND METHODS: Eighty pre-treatment orthodontic patients were divided into 3 groups according to Angle's classification. The first lateral cephalogram was taken in CO. Then leaf gauges were placed in between incisors for deprogramming. The second cephalogram was taken with leaf gauges in place to obtain centric relation. Both the radiographs were traced. Angle ANB was measured for sagittal analysis. ANB angle compares the position of mandible with the maxilla relating it with the cranial base. Angles from both cephalograms were compared with each other. RESULTS: Significant difference (p<0.0001) was found in values of ANB in CO (2.93 degrees -/+3.7) and CR (4.88 degrees -/+3.4) cephalograms. Significant CO-CR discrepancy was found (p<0.05) in Angle's class III patients (3.05 degrees -/+0.55) in comparison to Angle's class I (1.96 degrees -/+0.94) and class II (1.65 degrees -/+0.65). CONCLUSION: CO-CR discrepancy can occur regardless of Angle's classification. Special emphasis should be given to Angle's class III patients for the centric slide.

Adolescent↗

PubMed2000

Leaf orientation, light interception and stomatal conductance of Eucalyptus globulus ssp. globulus leaves.

Juvenile and adult leaves of the heteroblastic species Eucalyptus globulus Labill. ssp. globulus did not show active diurnal orientation toward or away from incident radiation. Juvenile leaves of a late-maturing sapling of a Tasmanian provenance were evenly distributed in all azimuth sectors. In contrast, an early-maturing sapling of the same age from Wilsons Promontory, Victoria had a predominance of adult leaf blades facing east and west. Mid-vein and blade angles of juvenile and adult leaves were non-random with an overall vertical declination of the leaves. Both leaf types intercepted a greater irradiance during the morning than at midday. Sub-horizontal juvenile leaves intercepted 22% more irradiance than vertical adult leaves during the middle of the day. The amphistomatal and isobilateral adult leaves intercepted sunlight equally on both leaf surfaces. Stomatal conductance was variable during the period of measurement but was similar for the Tasmanian juvenile (0.4 to 0.9 cm s(-1)) leaves and Wilsons Promontory adult (0.5 to 1.2 cm s(-1)) leaves. Greater light interception by the sub-horizontal juvenile leaves would confer a growth advantage to saplings and regenerating canopies. Reduced light interception and leaf temperature of vertical adult E. globulus leaves would assist in water conservation, particularly at high solar angles.

Journal Article↗

PubMed2005

An automatic CT-guided adaptive radiation therapy technique by online modification of multileaf collimator leaf positions for prostate cancer.

PURPOSE: To propose and evaluate online adaptive radiation therapy (ART) using in-room computed tomography (CT) imaging that detects changes in the target position and shape of the prostate and seminal vesicles (SVs) and then automatically modifies the multileaf collimator (MLC) leaf pairs in a slice-by-slice fashion. METHODS AND MATERIALS: For intensity-modulated radiation therapy (IMRT) using a coplanar beam arrangement, each MLC leaf pair projects onto a specific anatomic slice. The proposed strategy assumes that shape deformation is a function of only the superior-inferior (SI) position. That is, there is no shape change within a CT slice, but each slice can be displaced in the anteroposterior (AP) or right-left (RL) direction relative to adjacent slices. First, global shifts (in SI, AP, and RL directions) were calculated by three-dimensional (3D) registration of the bulk of the prostate in the treatment planning CT images with the daily CT images taken immediately before treatment. Local shifts in the AP direction were then found using slice-by-slice registration, in which the CT slices were individually registered. The translational shift within a slice could then be projected to a translational shift in the position of the corresponding MLC leaf pair for each treatment segment for each gantry angle. Global shifts in the SI direction were accounted for by moving the open portal superiorly or inferiorly by an integral number of leaf pairs. The proposed slice-by-slice registration technique was tested by using daily CT images from 46 CT image sets (23 each from 2 patients) taken before the standard delivery of IMRT for prostate cancer. A dosimetric evaluation was carried out by using an 8-field IMRT plan. RESULTS: The shifts and shape change of the prostate and SVs could be separated into 3D global shifts in the RL, AP, and SI directions, plus local shifts in the AP direction, which were different for each CT slice. The MLC leaf positions were successfully modified to compensate for these global shifts and local shape variations. The ART method improved geometric coverage of the prostate and SVs compared with the couch-shift method, particularly for the superior part of the prostate and all the SVs, for which the interfraction shape change was the largest. The dosimetric comparison showed that the ART method covered the target better and reduced the rectal dose more than a simple couch-translation method. CONCLUSIONS: ART corrected for interfraction changes in the position and shape of the prostate and SVs and gave dose distributions that were considerably closer to the planned dose distributions than could be achieved with simple alignment strategies that neglect shape change. The ART proposed in this investigation requires neither contouring of the daily CT images nor extensive calculations; therefore, it may prove to be an effective and clinically practical solution to the problem of interfraction shape changes.

Algorithms↗

PubMed1993

Initiation of multi-leaf collimator conformal radiation therapy.

Clinical studies have been initiated in conformal radiotherapy using a computer controlled multi-leaf collimator. Quantitative dosimetry and treatment planning studies comparing field shaping by lead alloy blocks and the multi-leaf collimator demonstrate the clinical acceptability of the multi-leaf collimator. Sixteen patients with tumors in multiple sites have received some part of their treatments with both blocking systems. Studies of dosimetry and field shaping show that the multi-leaf collimator produces clinically acceptable blocking for most field shapes and disease sites. The 80-20% penumbra was characterized for a wide range of shaped beams. For straight edges perpendicular to the leaf travel, the penumbra of measured dose distributions from the multi-leaf collimator is equal to conventional divergent blocking. When the multi-leaf collimator leaves approach a contour at an angle, the penumbra increases. At forty-five degrees, the maximum angle of approach, the penumbra is approximately 4 mm wider than that for divergent blocks. Three-dimensional treatment planning demonstrates that equivalent dose distributions can be obtained from the two field shaping systems. The multi-leaf collimator can be used effectively and efficiently to treat a variety of disease sites. Its optimal utility may be in treating complex fields--five or more shaped coplanar or non-coplanar beams. It is well suited for conformal therapy applications.

Humans↗

PubMed2001

Crown structure and leaf area index development in thinned and unthinned Eucalyptus nitens plantations.

The crown structure of Eucalyptus nitens (Deane & Maiden) Maiden 6 years after thinning, and the development of stand leaf area index both immediately and 6 years after thinning, were investigated. Thinning did not alter branch angle, branching density or the relationship between branch size and branch leaf area. However, larger branches were found in the lower crown of thinned trees and the increase in leaf area as a result of thinning occurred on the northern aspect of the crown. The vertical distribution of leaf area in unthinned trees was skewed toward the top of the crown and correlated with live crown ratio. The vertical distribution of leaf area in thinned trees tended to be less skewed and was unrelated to tree size or dominance. Leaf area index, as estimated from light interception measurements, increased at a constant rate soon after thinning regardless of residual stocking. In the longer term, residual stocking had a strong influence on leaf area increase per tree and was correlated with changes in crown length.

Eucalyptus↗