PubMed Health⌕ Search

SEARCH · PubMed Health

Results for “Biodegradation, Environmental”

Explore indexed PubMed citations for clinical trials, systematic reviews and public health research. Read source abstracts and follow each citation to its original PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 757 records · Page 42Linked to original sources

Environmental assessment of avermectins by the US Food and Drug Administration.

The Center of Veterinary Medicine (CVM) of the Food and Drug Administration (FDA) is required under the National Environmental Policy Act (NEPA) to include in its decision making, an objective consideration of the potential environmental impacts associated with each contemplated action. As part of the application process for new animal drugs, detailed data must be submitted in order to develop a prediction of the environmental fate and effects of the drug and/or its active metabolites. Ivermectin (22,23-dihydroavermectin B1) is a highly active antiparasitic animal drug utilized in a variety of injectable, oral and topical formulations. Residues of this drug may reach the environment through manufacturing and animal wastes and may potentially have effects on terrestrial and aquatic organisms. A comprehensive data base has been submitted to the FDA in support of the environmental assessments for ivermectin drug products. Detailed information has been submitted on the physical and chemical properties, introduction, fate and effects of the ivermectins in the environment. These data indicate that ivermectin binds tightly to soil and is subject to photodegradation and biotransformation to less active compounds. In contrast, ivermectin is highly toxic to certain aquatic organisms but would not be expected to partition into the aquatic environment. Much lower toxicity has been demonstrated toward bacteria, fungi, earthworms, plants and birds. CVM evaluated ivermectin products based on the use pattern of the product, the metabolism pattern in target animals, calculations of potential ivermectin residue concentrations in the environment and data on persistence, soil sorption and acute toxicity in aquatic and terrestrial environments.

Animals↗

Janibacter brevis sp. nov., a new trichloroethylene-degrading bacterium isolated from polluted environments.

Two strains that were strongly able to degrade trichloroethylene were isolated from contaminated environmental samples. The isolates are non-motile, aerobic, non-spore-forming, gram-positive coccoid to short rods with cell-wall peptidoglycan containing meso-diaminopimelic acid. The major type of menaquinone is MK-8(H4). The polar lipids were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylinositol. Mycolic acids were absent. The G+C content of the DNA was 72 mol%. Furthermore, comparison of 16S rDNA sequences shows that the isolates clearly belong to the genus Janibacter. The isolates differ from Janibacter limosus at the species level, as shown by the value for DNA-DNA hybridization. It is therefore proposed that the strains be assigned to the genus Janibacter as Janibacter brevis sp. nov.

Actinomycetales↗

Development and characterization of a whole-cell bioluminescent sensor for bioavailable middle-chain alkanes in contaminated groundwater samples.

A microbial whole-cell biosensor was developed, and its potential to measure water-dissolved concentrations of middle-chain-length alkanes and some related compounds by bioluminescence was characterized. The biosensor strain Escherichia coli DH5 alpha(pGEc74, pJAMA7) carried the regulatory gene alkS from Pseudomonas oleovorans and a transcriptional fusion of PalkB from the same strain with the promoterless luciferase luxAB genes from Vibrio harveyi on two separately introduced plasmids. In standardized assays, the biosensor cells were readily inducible with octane, a typical inducer of the alk system. Light emission after induction periods of more than 15 min correlated well with octane concentration. In well-defined aqueous samples, there was a linear relationship between light output and octane concentrations between 24 and 100 nM. The biosensor responded to middle-chain-length alkanes but not to alicyclic or aromatic compounds. In order to test its applicability for analyzing environmentally relevant samples, the biosensor was used to detect the bioavailable concentration of alkanes in heating oil-contaminated groundwater samples. By the extrapolation of calibrated light output data to low octane concentrations with a hyperbolic function, a total inducer concentration of about 3 nM in octane equivalents was estimated. The whole-cell biosensor tended to underestimate the alkane concentration in the groundwater samples by about 25%, possibly because of the presence of unknown inhibitors. This was corrected for by spiking the samples with a known amount of an octane standard. Biosensor measurements of alkane concentrations were further verified by comparing them with the results of chemical analyses.

Aldehydes↗

[Effects of environmental pollutants on arbuscular mycorrhiza formation and function].

Arbuscular mycorrhiza (AM) possesses the characteristics of both microbe and plant. Considerable attention has been focused on the use of AM in the remediation of polluted soil, but AM could be poisoned by pollutants when exposed to polluted soil, and thus, the significance of its application might be reduced. Therefore, how to reduce the negative effects of pollutants on AM is an issue to be considered in remedying polluted soil by AM. This paper briefly reviewed the effects of different organic and inorganic pollutants on AM structure, formation and function, and discussed the possible mechanisms. Both organic and inorganic pollutants could have detrimental effects on AM structure, formation and function, such as low spore germination, colonization rate, and hyphal growth. Organic pollutants indirectly affect the activity of AM fungi through affecting the carbohydrates allocation from plant to the fungi, while heavy metals directly inhibited the activity of AM fungi.

Biodegradation, Environmental↗

1,2,4-trichlorobenzene marine risk assessment with special emphasis on the Osparcom region North Sea.

A risk assessment on 1,2,4-trichlorobenzene was carried out specifically for the marine environment according to the methodology laid down in the EU Risk Assessment Regulation 1488/94 and the Guidance Documents of the EU Existing Substances Regulation 793/93. The study consists of the collection and evaluation of data on effects and environmental concentrations from analytical monitoring programs in large rivers and estuaries in the North Sea area. The risk is indicated by comparing the predicted environmental concentration (PEC) with the predicted no-effect concentrations (PNEC) for the marine aquatic environment. A PNECwater) value of 0.3 microg/l and a PNECsed value of 38 microg/kgdw were derived from the results of toxicological studies in organisms representing three trophic levels, i.e. aquatic plants, invertebrates and fish. Based on monitoring data two situations are distinguished: a typical case and a worst case with a PECwater of <0.047 and 0.1 microg/l, respectively, and a PECsed of 40 and 90 microg/kgdw, respectively. The calculated PEC/PNEC ratios were 0.16 and 0.3 for water and 1 and 2.4 for sediment, respectively. It was concluded that no risks are expected for aquatic organisms. Based on the combination of worst-case assumptions risks to benthic organisms could not be fully excluded, but since all open uses of 1,2,4-trichlorobenzene will be ended following the EU risk assessment outcome of 2001 any potential risk is expected to be reduced accordingly. 1,2,4-trichlorobenzene is not considered toxic according to the EU criteria and the available data on persistence of 1,2,4-trichlorobenzene indicate a half-life in water of a few days and a significant biodegradation potential. The bioaccumulation potential is low to moderate with most BCF ratios for fish ranging from 600 to 1400 and one highest of 2020. Based on an extensive evaluation of persistence, biodegradation and bioaccumulation data it is concluded that 1,2,4-trichlorobenzene is not a PBT, since it does not fulfill any of the EU criteria. Biomagnification in the food chain is not expected due to the relatively high elimination rate constants.

Animals↗

Hydrocarbon spills on Antarctic soils: effects and management.

Antarctic exploration and research have led to some significant although localized impacts on the environment. Human impacts occur around current or past scientific research stations, typically located on ice-free areas that are predominantly soils. Fuel spills, the most common occurrence, have the potential to cause the greatest environmental impact in the Antarctic through accumulation of aliphatic and aromatic compounds. Effective management of hydrocarbon spills is dependent on understanding how they impact soil properties such as moisture, hydrophobicity, soil temperature, and microbial activity. Numbers of hydrocarbon-degrading bacteria, typically Rhodococcus, Sphingomonas, and Pseudomonas species for example, may become elevated in contaminated soils, but overall microbial diversity declines. Alternative management practices to the current approach of "dig it up and ship it out" are required but must be based on sound information. This review summarizes current understanding of the extent and effects of hydrocarbon spillage on Antarctic soils; the observed physical, chemical, and biological responses of such soils; and current gaps in knowledge.

Accidents↗

Experimental system to displace radioisotopes from upper to deeper soil layers: chemical research.

BACKGROUND: Radioisotopes are introduced into the environment following nuclear power plant accidents or nuclear weapons tests. The immobility of these radioactive elements in uppermost soil layers represents a problem for human health, since they can easily be incorporated in the food chain. Preventing their assimilation by plants may be a first step towards the total recovery of contaminated areas. METHODS: The possibility of displacing radionuclides from the most superficial soil layers and their subsequent stabilisation at lower levels were investigated in laboratory trials. An experimental system reproducing the environmental conditions of contaminated areas was designed in plastic columns. A radiopolluted soil sample was treated with solutions containing ions normally used in fertilisation (NO3-, NH4+, PO4--- and K+). RESULTS: Contaminated soils treated with an acid solution of ions NO3-, PO4--- and K+, undergo a reduction of radioactivity up to 35%, after a series of washes which simulate one year's rainfall. The capacity of the deepest soil layers to immobilize the radionuclides percolated from the superficial layers was also confirmed. CONCLUSION: The migration of radionuclides towards deeper soil layers, following chemical treatments, and their subsequent stabilization reduces bioavailability in the uppermost soil horizon, preventing at the same time their transfer into the water-bearing stratum.

Accidents↗

Diversity, distribution and divergence of lin genes in hexachlorocyclohexane-degrading sphingomonads.

Two forms of hexachlorocyclohexane (HCH), gamma-HCH (lindane) and technical HCH (incorporating alpha-, beta-, gamma- and delta- isomers), have been used against agricultural pests and in health programs since the 1940s. Although all the isomers are present in the milieu, delta- and beta-HCH isomers are the most problematic and present a serious environmental problem. Bacteria that degrade HCH isomers have been isolated from HCH contaminated soils from different geographical locations around the world (from the family Sphingomonadaceae). Interestingly, all these bacteria contain nearly identical lin genes (responsible for HCH degradation), which are diverging to perform several catabolic functions. The organization and diversity of lin genes have been studied among several sphingomonads, and they have been found to be associated with plasmids and IS6100, both of which appear to have a significant role in their horizontal transfer. The knowledge of the molecular genetics, diversity and distribution of lin genes, and the potential of sphingomonads to degrade HCH isomers, can now be used for developing bioremediation techniques for the decontamination of HCH contaminated sites.

Bacterial Proteins↗

Contaminated environments in the subsurface and bioremediation: organic contaminants.

Due to leakages, spills, improper disposal and accidents during transport, organic compounds have become subsurface contaminants that threaten important drinking water resources. One strategy to remediate such polluted subsurface environments is to make use of the degradative capacity of bacteria. It is often sufficient to supply the subsurface with nutrients such as nitrogen and phosphorus, and aerobic treatments are still dominating. However, anaerobic processes have advantages such as low biomass production and good electron acceptor availability, and they are sometimes the only possible solution. This review will focus on three important groups of environmental organic contaminants: hydrocarbons, chlorinated and nitroaromatic compounds. Whereas hydrocarbons are oxidized and completely mineralized under anaerobic conditions in the presence of electron acceptors such as nitrate, iron, sulfate and carbon dioxide, chlorinated and nitroaromatic compounds are reductively transformed. For the aerobic often persistent polychlorinated compounds, reductive dechlorination leads to harmless products or to compounds that are aerobically degradable. The nitroaromatic compounds are first reductively transformed to the corresponding amines and can subsequently be bound to the humic fraction in an aerobic process. Such new findings and developments give hope that in the near future contaminated aquifers can efficiently be remediated, a prerequisite for a sustainable use of the precious-subsurface drinking water resources.

Benzene Derivatives↗

Aerobic dechlorination of cis- and trans-dichloroethenes by some indigenous bacteria isolated from contaminated sites in Africa.

The innate toxicity of dichloroethenes (DCEs) and their tendency to be reduced to vinyl chloride (VC) (a known human carcinogen) is a cause for environmental concern. Aerobic bacteria capable of growth on cis- and trans-DCEs as sole carbon and energy sources were isolated by enrichment culture technique and identified to belong to the genera; Bacillus, Pseudomonas and Acinetobacter. Axenic and mixed cultures of the bacterial isolates utilized DCEs at concentrations above the maximum contaminant level allowable in drinking water by the Environmental Protection Agency. Their specific growth rate constant ranged significantly (P < 0.05) between 0.346-0.552 and 0.461-0.667 d(-1); while the maximum specific substrate utilization rate ranged significantly (P < 0.05) between 20.01-29.79 and 31.40-42.83 nmol h(-1) (mg of protein)(-1) in cis- and trans-DCE, respectively. The optimum growth was observed at 30 degrees C and at a pH of 7.0 with up to 96% of the stoichiometric-expected chloride released. Serial adaptation positively affected the growth yields and dehalogenase activities of the organisms with multiple antibiotic patterns also demonstrated by the isolates. These findings therefore indicated the important roles that these organisms may play in the bioremediation of sites polluted with chlorinated ethene compounds in Africa.

Bacteria, Aerobic↗

Mineralization kinetics of chemicals in soils in relation to environmental conditions.

The mineralization kinetics of the detergent n-dodecylbenzenesulfonate ([14C]LAS) and the plasticizer di(2-ethylhexyl)phthalate ([14C]DEHP) were studied in three fresh sampled soils of different type. Time series of 14CO2 evolution were fitted with various linear and nonlinear models. The kinetics could be represented best by a 3/2-order function with linear adaptation and three parameters: x1 describing the gradient of the exponential part of the curve, x2 the lag phase, and x3 the last, asymptotic part. These parameters as well as the maximal degraded amounts (A) were correlated with various environmental conditions. For LAS, A was similar in all three soils and was positively related to pH in two soils and to humidity in one soil (rendzina). The parameters x1-x3 were positively influenced by soil humidity in all three soils. The degraded amounts A, expressed as percentage of added dose, were independent of initial concentration. Both A and the parameters x1-x3 increased with increasing temperature. Degradation was negligible below 3 degrees C. For DEHP, the degradation was much slower than that of LAS and was most rapid and most complete in the rendzina soil. Relative degradation A was lower for higher initial application rates. Temperature influenced both A and the lag phase. Degradation was not significant below 10 degrees C.

Benzenesulfonates↗

Ecotoxicological monitoring of remediation in a coke oven soil.

Assessment of contaminated sites is usually based on chemical analyses of hazardous compounds in soil. This is enough either to assess the environmental hazard of contaminated soil nor to evaluate the efficiency of applied remediation techniques. Information on the bioavailability of complex mixtures of xenobiotics and degradation products cannot be provided by chemical analytical data, but results from bioassays can integrate the effects of pollutants in mixtures. In the preservation of human health and environmental quality, it is important to evaluate ecotoxicological effects of contaminated industrial soils to complement the techniques of analytical chemistry. The monitoring of a coke oven soil and the evaluation of the landfarming treatment technique, conducted on-site in a pilot scale installation, was done by a battery of ecotoxicological tests: acute, chronic, and genotoxicity tests. Contaminated soil samples revealed toxic effects for different species mainly due to high concentrations of polycyclic aromatic hydrocarbons (PAHs). After landfarming treatment, soil samples presented significant reduction in toxicity, confirming the effectiveness of the landfarming process pointed out by a significant reduction in low molecular weight PAH concentrations. Comparative analysis of the different ecotoxicological tests allowed the establishment and validation of a more suitable procedure for the monitoring of PAH contaminated soils.

Animals↗

Oxidation of trichloroethylene, 1,1-dichloroethylene, and chloroform by toluene/o-xylene monooxygenase from Pseudomonas stutzeri OX1.

Toluene/o-xylene monooxygenase (ToMO) from Pseudomonas stutzeri OX1, which oxidizes toluene and o-xylene, was examined for its ability to degrade the environmental pollutants trichloroethylene (TCE), 1, 1-dichloroethylene (1,1-DCE), cis-1,2-DCE, trans-1,2-DCE, chloroform, dichloromethane, phenol, 2,4-dichlorophenol, 2,4,5-trichlorophenol, 2,4,6-trichlorophenol, 2,3,5,6-tetrachlorophenol, and 2,3,4,5, 6-pentachlorophenol. Escherichia coli JM109 that expressed ToMO from genes on plasmid pBZ1260 under control of the lac promoter degraded TCE (3.3 microM), 1,1-DCE (1.25 microM), and chloroform (6.3 microM) at initial rates of 3.1, 3.6, and 1.6 nmol/(min x mg of protein), respectively. Stoichiometric amounts of chloride release were seen, indicating mineralization (2.6, 1.5, and 2.3 Cl- atoms per molecule of TCE, 1,1-DCE, and chloroform, respectively). Thus, the substrate range of ToMO is extended to include aliphatic chlorinated compounds.

Biodegradation, Environmental↗

Phytoremediation.

Phytoremediation, the use of plants and their associated microbes for environmental cleanup, has gained acceptance in the past 10 years as a cost-effective, noninvasive alternative or complementary technology for engineering-based remediation methods. Plants can be used for pollutant stabilization, extraction, degradation, or volatilization. These different phytoremediation technologies are reviewed here, including their applicability for various organic and inorganic pollutants, and most suitable plant species. To further enhance the efficiency of phytoremediation, there is a need for better knowledge of the processes that affect pollutant availability, rhizosphere processes, pollutant uptake, translocation, chelation, degradation, and volatilization. For each of these processes I review what is known so far for inorganic and organic pollutants, the remaining gaps in our knowledge, and the practical implications for designing phytoremediation strategies. Transgenic approaches to enhance these processes are also reviewed and discussed.

Biodegradation, Environmental↗

Screening of novel cellulose-degrading bacterium and its application to denitrification of groundwater.

To establish an environmentally friendly groundwater bioremediation process using a cellulose carrier combined with cellulose-utilizing, denitrifying microorganisms, a novel psychrophilic bacterium, designated CL-5, which can degrade a commercial-based cellulose carrier as the sole carbon source, was screened. Since the denitrification capability of CL-5 is low, complex microbial systems were constructed together with other denitrifying bacteria designated NR-1 and NR-2 that were also isolated from soil. The nitrate-reducing activities of mixed cultures were much higher than those of the pure cultures of CL-5, NR-1 and NR-2. The highest N(2)O and N(2) formation activities were observed in the mixed culture of CL-5+NR-2.

Biodegradation, Environmental↗

Elimination of the hazards from hazardous wastes.

The "hazard" associated with a waste essentially controls the overall engineering approach to finding suitable alternatives for solving potential disposal problems. It should be recognized that all factors affecting environmental equilibrium must be considered, including product sales, process design, financing, pre- and end-of-pipe treatment, residuals management, and ultimate bioaccumulation of residuals. To meet this challenge, a systems approach to waste treatment and residuals disposal provides a logical approach, but this management concept requires a thorough understanding of the important physical and chemical aspects of the problem, as well as many social implications of the resulting decisions. Thus waste management within a plant necessarily involves process control, pretreatment and end-of-pipe treatment. Further, it follows that residuals management from a disposal point-of-view must ultimately embrace what is called the "multi-barrier concept." In essence, hazard elimination occurs in varying degrees during each phase of a properly engineered system.

Adsorption↗

Monitoring the efficacy of bioremediation.

The general acceptance of bioremediation technology as an environmentally sound and economic treatment for hazardous waste requires the demonstration of its efficacy, reliability and predictability, as well as its advantages over conventional treatments. An effective monitoring design includes protocols for treatment-specific, representative sampling, control and monitoring: these should take into account abiotic and biotic pollutant fate processes in all relevant process compartments. A number of well-established and novel chemical and molecular biological monitoring techniques and parameters are available. Logical and balanced combinations of both chemical and biological monitoring parameters should be used to demonstrate complete degradation and detoxification of a hazardous waste as well as the biological nature of the process. At each process-scale level, a set of general criteria should be used for systematic evaluation of the overall efficacy of bioremediation.

Biodegradation, Environmental↗

Plasmachemical degradation of azo dyes by humid air plasma: Yellow Supranol 4 GL, Scarlet Red Nylosan F3 GL and industrial waste.

A recent non-thermal plasma technique (i.e., a gliding arc discharge which generates reactive species at atmospheric pressure) is tested for pollution abatement of dyes dispersed in synthetic solutions and industrial effluents. Yellow Supranol 4 GL (YS) and Scarlet Red Nylosan F3 GL (SRN) are toxic synthetic dyes widely used in the Algerian textile industry and frequently present in liquid wastes of manufacture plants. Classical removal treatment processes are not efficient enough, so that the presence of dyes in liquid effluents may cause serious environmental problems, in connection with reusing waste waters for irrigation. The degradation processes achieved by the oxidising species formed in the plasma are followed by UV/VIS spectroscopy and by chemical oxygen demand measurements. They are almost complete (i.e., 92.5% for YS and 90% for dilute SRN) and rapidly follow pseudo-first-order laws, with overall estimated rate constants 3 x 10(-4) and 4 x 10(-4)s-1 for YS and SRN, respectively. The degradation rate constant for the industrial mixture (i.e., k = 1.45 x 10(-3)s-1) is a mean value for two consecutive steps (210(-3) and 6 x 10(-5)s-1) measured at the absorption peaks of the major constituent dyes, YS and SRN.

Air↗