PubMed Health⌕ Search

SEARCH · PubMed Health

Results for “systematic evolution”

Explore indexed PubMed citations for clinical trials, systematic reviews and public health research. Read source abstracts and follow each citation to its original PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 829 records · Page 46Linked to original sources

Consumer-resource body-size relationships in natural food webs.

It has been suggested that differences in body size between consumer and resource species may have important implications for interaction strengths, population dynamics, and eventually food web structure, function, and evolution. Still, the general distribution of consumer-'resource body-size ratios in real ecosystems, and whether they vary systematically among habitats or broad taxonomic groups, is poorly understood. Using a unique global database on consumer and resource body sizes, we show that the mean body-size ratios of aquatic herbivorous and detritivorous consumers are several orders of magnitude larger than those of carnivorous predators. Carnivorous predator-prey body-size ratios vary across different habitats and predator and prey types (invertebrates, ectotherm, and endotherm vertebrates). Predator-prey body-size ratios are on average significantly higher (1) in freshwater habitats than in marine or terrestrial habitats, (2) for vertebrate than for invertebrate predators, and (3) for invertebrate than for ectotherm vertebrate prey. If recent studies that relate body-size ratios to interaction strengths are general, our results suggest that mean consumer-resource interaction strengths may vary systematically across different habitat categories and consumer types.

Animals↗

[Isolated adenopathy in leishmaniasis due to Leishmania infantum].

INTRODUCTION: Leishmaniasis is rarely manifested by isolated lymphadenitis in the mediterranean area, only 13 cases have been reported. OBSERVATION: An isolated cervical lymphadenitis was observed in a 37 year-old man living in the north of Tunisia. The fine needle aspiration of the enlarged lymph node found Leishmania in both direct examination and culture. Isoenzymatic typing identified Leishmania infantum MON-1. The evolution was slowly favourable without treatment. DISCUSSION: Despite the rare number of cases described, looking for leishmaniasis should be systematic when confronted with lymphadenitis in endemic areas. The therapeutic decision depends on the immunological status of the patients and the possibility of regular medical controls.

Adult↗

[Sites of fixation of Amblyomma variegatum ticks on their hosts in Guadeloupe (French west Indies)].

The examination of 458 domestic and wild hosts of the tick A. variegatum allowed to collect 8,581 larvae, 646 nymphs, 685 adults in 9 different animal species and to determine their preferential attachment sites. In another survey on 15 goats and 5 cattle, 12,345 larvae, 2,111 nymphs and 4,625 adults were counted on the anatomic sites. Immature ticks feed preferentially on the head, neck and limbs of birds, the limbs of mongoose and the limbs and ears of dogs, goats and cattle. Adults feed only on hosts of medium to large size and attach on ventral parts of the body, especially the groin, perineum, axillae and the dewlap of cattle. This tick species should be searched for on these sites when estimating its propagation in a threatened area or the evolution of its population during an eradication campaign. Moreover, the acaricide concentration on these sites must be optimal during systematic treatments.

Animals↗

[Mathematical models in epidemiological analysis. II. Typhoid fever: time series analysis (author's transl)].

In this paper the systematic analysis of oro-faecal infectious diseases is continued. In order to propose a dynamic model for the evolution of the endemic typhoid fever, we have studied the behaviour of the number of cases of this disease in the town of Bari (Italy) during the years 1955-1978, by the methods of time series analysis. The analysis has pointed out the typical seasonal character of such a disease, and in particular the presence of a main winter cycle followed by a less evident summer cycle. The stochastic model which has been identified on the basis of the data from 1964 to 1978 allows a forecast for the years after 1978.

Epidemiologic Methods↗

[Capitellum fractures of children (author's transl)].

Capitellum fractures are exceedingly rare. The five observations reported herein show that the clinical aspect is often discrete, necessitating a detailed radiographic study, especially with the elbow seen in profile. As the spontaneous evolution of this type of fracture presents a poor prognosis, surgical reduction of the fracture is immediately indicated and systematic osteosynthesis guarantees a satisfactory functional result.

Adolescent↗

Achalasia. A morphologic study of 42 resected specimens.

Achalasia is characterized by failure of relaxation of the lower esophageal sphincter and absence of progressive peristalsis in the esophageal body. Few data are available regarding the morphologic features of achalasia, in particular its histologic progression. The esophagi of 42 patients with achalasia treated with total thoracic esophagectomy were examined histologically in order to systematically identify morphologic features of clinically unresponsive achalasia and to determine what could be learned about the disease's evolution. In all cases, myenteric ganglion cells within the esophageal body were markedly diminished, with 20 specimens having none. Twenty specimens had residual ganglion cells in the proximal esophagus, and 15 specimens had a few randomly distributed ganglion cells in the mid- and distal portions of the esophagus. Inflammation within myenteric nerves, present in all cases, generally consisted of a mixture of lymphocytes and eosinophils, occasionally with plasma and mast cells. Focal replacement of myenteric nerves by collagen occurred in all cases, and there was almost complete replacement in several cases. Actual destruction of the residual ganglion cells was not seen. The resected esophagi also shared extramyenteric morphologic features. Some features probably stemmed from physiologic obstruction, such as muscular hypertrophy, mainly of the muscularis propria (all cases), with secondary degeneration and fibrosis (29 cases), and eosinophilia of the muscularis propria (22 cases). Other changes, probably resulting from chronic stasis of ingested materials in the lumen, included diffuse squamous hyperplasia (all cases), lymphocytic mucosal esophagitis (28 cases), lymphocytic inflammation of the lamina propria and submucosa with prominent germinal centers (all cases), and submucosal periductal or glandular inflammation with complete loss of submucosal glands in half of the cases. One patient had high-grade squamous dysplasia, and another had superficially invasive squamous cell carcinoma. A third group of changes was probably due to previous esophagomyotomy, including abnormal gastroesophageal reflux, as shown by pH reflux testing (13 cases) and Barrett's mucosa (four cases). In one case of Barrett's there was low-grade dysplasia. Clinically unresponsive, surgically resected achalasia has almost total loss of ganglion cells, and widespread destruction of myenteric nerves has already occurred. The only active component is myenteric inflammation. However, it cannot be determined whether this inflammation is a manifestation of ongoing nerve destruction or whether it is a secondary phenomenon.

Adult↗

[Neovascular glaucoma in the diabetic patient].

Neovascular glaucoma is the final complication of diabetic proliferative retinopathies. Its incidence had significantly reduced during these last ten years owing to the improvement of the management of diabetic patients and systematic panretinal photocoagulation for the treatment of these proliferative retinopathies. Contrary to the other causes of neovascular glaucomas, its evolution is usually capricious, bilateral and its delay of appearance may be quite variable. Vitrectomy--when non associated to peroperative endoretinal photocoagulation--and cataract extraction--mainly intracapsular cataract extraction--increase significantly the incidence of this complication. Fluorescein angiography of the anterior segment and fluorescein gonio-angiography may be contributive to the diagnosis of early rubeosis iridis and/or to evaluation of the efficacy of panretinal photocoagulation. Its management must remain as conservative as possible. It lies upon panretinal photocoagulation and/or cryoablation, both representing the preventive and the curative treatment of this secondary glaucoma. Secondarily a filtering procedure associated with antimetabolites or an anterior chamber drainage implant may be discussed individually if necessary and according to the residual visual function.

Cataract Extraction↗

[Risk factors for local infection in burns. Multivariate study].

BACKGROUND: Infection, which is the most serious complication in burns has been little studied. There the aim of the present was to study this complication and its risk factors in patients admitted into a Burn Intensive Care Unit. METHODS: Patients admitted from 1988-1992 were prospectively studied. The characteristics of the patients were systematically collected on admission (i.e. age, body area burned [BAB], previous disease) as were those of the patient's evolution in the Burn Unit (i.e. infection, manipulation, and therapy). Prior to analysis the patients were randomly divided into two groups: a "study" group with 455 patients and a "validation" group of 163 patients. A uni and bivariate descriptive study was performed in addition to a multivariate study by unconditional multiple logistic regression obtaining one predictive and one explicative equation. The former was thereafter validated in a sample of 163 patients. RESULTS: No significant differences were observed between the two groups which were made up of severely ill patients (20% BAG 2/3 with dermodeep flame burns, mean age of 43 years) with a similar rate of infection 7.2% and 8.6%, respectively. The ethiologic agent was Pseudomonas aeruginosa in both groups. On applying logistic regression a predictive equation of burn infection and the main risk factors of infection were obtained: BAB (between 15-30%, odds ratio of 4, being 15 if BAB > 30%), duration of central catheterization prior to infection (1-15 days, odds ratio of 6, being 31 if it is longer than 15 days) and preinfection stay (between 15-30 days, odds ratio of 3, being 10 if the stay is longer than 30 days). The validation was obtained on applying the predictive equation to the patients in both groups to calculate the number of infected patients. In both cases the prediction was correct. CONCLUSIONS: The main risk factors of burn infection are: body area burned, central catheterization and preinfection hospital stay. The equation which adequately predicts the probability of infection based on the characteristics of the burned patients is a good tool for reducing the frequency of infections in burned patients.

Adult↗

The role of extraterrestrial phenomena in extinction.

In the several years since the Alvarez report of anomalously high iridium concentrations at the Cretaceous-Tertiary boundary, evidence for the involvement of meteorite impacts in biological extinction has increased dramatically. Much more research will be needed, however, before meteorite impact is established as a general causal factor in extinction. Of ever greater long-term interest is the possibility that other extraterrestrial forces have had important influences on the evolution of life. To recognize the effects of such forces, it will be necessary to coordinate the research of astronomy and paleontology so that testable predictions can be formulated. It is possible that known, systematic changes in the Solar System or Galaxy have had effects on global biology and that these effects have been preserved in the paleontological record.

Biological Evolution↗

The pattern of mammalian evolution and the relative rate of molecular evolution.

The rates of nucleotide substitution at four genes in four orders of eutherian mammals are compared in relative rate tests using marsupial orthologs for reference. There is no evidence of systematic variation in evolutionary rate among the orders. The sequences are used to reconstruct the phylogeny of the orders using maximum likelihood, parsimony and compatibility methods. A branching order of rodent then ungulate then primate and lagomorph is overwhelmingly indicated. The nodes of the nucleotide based cladograms are widely separated in relation to the total lengths of the branches. The assumption of a star phylogeny that underlies Kimura's test for molecular evolutionary rate variation is shown to be invalid for eutherian mammals. Excess variance in nucleotide or amino acid differences between mammalian orders, above that predicted by neutral theory is explained better by variation in divergence time than by variation in evolutionary rate.

Animals↗

Systematic determination of the mosaic structure of bacterial genomes: species backbone versus strain-specific loops.

BACKGROUND: Public databases now contain multitude of complete bacterial genomes, including several genomes of the same species. The available data offers new opportunities to address questions about bacterial genome evolution, a task that requires reliable fine comparison data of closely related genomes. Recent analyses have shown, using pairwise whole genome alignments, that it is possible to segment bacterial genomes into a common conserved backbone and strain-specific sequences called loops. RESULTS: Here, we generalize this approach and propose a strategy that allows systematic and non-biased genome segmentation based on multiple genome alignments. Segmentation analyses, as applied to 13 different bacterial species, confirmed the feasibility of our approach to discern the 'mosaic' organization of bacterial genomes. Segmentation results are available through a Web interface permitting functional analysis, extraction and visualization of the backbone/loops structure of documented genomes. To illustrate the potential of this approach, we performed a precise analysis of the mosaic organization of three E. coli strains and functional characterization of the loops. CONCLUSION: The segmentation results including the backbone/loops structure of 13 bacterial species genomes are new and available for use by the scientific community at the URL: http://genome.jouy.inra.fr/mosaic.

Agrobacterium tumefaciens↗

Cytogenetic analysis of four species of the genus Alsodes (Anura: Leptodactylidae) with comments about the karyological evolution of the genus.

A comparative cytogenetic analysis of Alsodes pehuenche, A. vanzolinii, A. verrucosus and A. aff. vittatus show that all four species share the same diploid number 2n = 26; the fundamental number is 50 in A. vanzolinii and 52 in A. aff. vittatus, A. pehuenche and A. verrucosus. The karyotypes of A. pehuenche and A. aff. vittatus are described for the first time; the C-band patterns, the NOR locations and Q-band patterns are also described for the first time for the four species. C-band patterns are species specific and useful to identify the taxa. The usefulness of the chromosomal data in taxonomy and systematics of Alsodes species is discussed. Transformation of euchromatin into heterochromatin and centric fissions and translocations are proposed as the main mechanisms that govern the chromosomal evolution of the frog genus Alsodes.

Animals↗

Status signaling games in animal contests.

This paper provides evolutionary game-theoretic models for the status signaling problem in animal contests. Two stage status signaling game models are introduced and evolutionarily stable strategies and their modifications are characterized for the games. It is shown that in the stable long-run equilibria, animals must make use of signals systematically to settle the contest peacefully.

Animals↗

A new test of phylogenetic model fitness addresses the issue of the basal angiosperm phylogeny.

We readdress the issue of phylogeny of the basal extant angiosperms employing a source previously not systematically investigated, specifically, the non-coding sequences of cpDNA. Comparison of trees with and without grasses or the outgroup (Pinus) in our analyses revealed no rearrangements in tree topology that might be expected if LBA were distorting the position of the magnoliids. For each model applied, irrespective of whether monocots or ANITA members appeared basally divergent, the orchid Phalaenopsis assumed the same position on the trees with the reduced taxon set as did the branch bearing the orchid plus the grasses in the full alignment. However, our new test of model fitness revealed a different flaw influencing the placement of monocots, which is related to model mis-specification. This flaw similarly affects the full alignment and the alignment with grasses removed. In both cases the models favouring a relatively derived position for the monocots and basal placement of the branch of Amborella plus Nymphaea provide better overall prediction of the observed data structure. In the view of apparent unsuitability of the bootstrap method for large data sets, our novel test provides a new means of exploring conflicts caused by systematic errors in phylogenetic analyses.

Cell Nucleus↗

Larval morphology, genetic divergence, and contrasting levels of host manipulation between forms of Pomphorhynchus laevis (Acanthocephala).

Studies on parasite species with a wide geographic and ecological range may be confounded by still equivocal taxonomic identification. Here, we investigated genetic polymorphism and behavioural changes induced in a common intermediate host, in two different forms of Pomphorhynchus laevis based on the morphology of the larval infective stage (cystacanth). A 'smooth type' (S) and a 'wrinkled type' (W) of cystacanth were distinguished based on their surface and shape. We analysed sequence divergence at both nuclear (ribosomal gene 18S rDNA, and ribosomal internal transcribed spacers, ITS1/ITS2) and mitochondrial (cytochrome c oxidase subunit 1) genes of P. laevis cystacanths and adults at various geographical scales. A high level of sequence divergence at ITS1, ITS2 and cytochrome c oxidase subunit 1 (11, 8 and 20%, respectively) was found between these two forms. The divergence pattern consistently discriminated two groups independently of geographic origin or host, and was congruent with larval morphology. The two forms also strongly differed in the intensity of behavioural change induced in their common intermediate host, Gammarus pulex, with the S-type parasite inducing a positive phototactism, whereas W-type infected gammarids were as photophylic as uninfected ones. Overall, our data strongly support the specific status of these two forms. We suggest that smooth cystacanths correspond to P. laevis, whereas wrinkled cystacanths might correspond to the previously described and poorly documented, Pomphorhynchus tereticollis, considered a synonym of P. laevis. This study also confirms the value of a joint analysis of internal transcribed spacers and cytochrome c oxidase subunit 1 genes to biogeographic studies on these species. Finally, we emphasize the importance of linking morphological and biological characteristics of acanthocephalan cystacanths to molecular data, in the study of the evolutionary ecology and systematics of this group.

Acanthocephala↗

Sexual and reproductive behaviour of Drosophila melanogaster from a microclimatically interslope differentiated population of "Evolution Canyon" (Mount Carmel, Israel).

The strong microscale interslope environmental differences in "Evolution Canyon" provide an excellent natural model for sympatric speciation. Our previous studies revealed significant slope-specific differences for a fitness complex of Drosophila. This complex involved either adaptation traits (tolerance to high temperature, different viability and longevity pattern) or behavioural differentiation, manifested in habitat choice and non-random mating. This remarkable differentiation has evolved despite a very small interslope distance (a few hundred metres only). Our hypothesis is that strong interslope microclimatic contrast caused differential selection for fitness-related traits accompanied by behavioural differentiation and reinforced by some sexual isolation, which started incipient speciation. Here we describe the results of a systematic analysis of sexual behaviour in a non-choice situation and several reproductive parameters of D. melanogaster populations from the opposite slopes of "Evolution Canyon". The evidence indicates that: (i) mate choice derives from differences in mating propensity and discrimination; (ii) females from the milder north-facing slope discriminate strongly against males of the opposite slope; (iii) both sexes of the south-facing slope display distinct reproductive and behavioural patterns with females showing increased fecundity, shorter time before remating and relatively higher receptivity, and males showing higher mating propensity. These patterns represent adaptive life strategies contributing to higher fitness.

Animals↗

The continuing evolution of the drug discovery process in the pharmaceutical industry.

Many early discoveries in the pharmaceutical industry were through serendipity. Later, targets were mainly identified in animals and systematically exploited through the identification of potent and selective molecules. A disease association was normally obtained through the clinical testing of candidate molecules in patients. The technological advances in the last few years offer the possibility of knowing more about the disease, and this is driving the industry towards a disease-based approach where understanding the disease becomes central to the process. This is now possible thanks to the recent explosion in molecular and cellular biology, together with the application of genetics and genomics. New screening technologies have also revolutionized the identification of chemical leads. Now, high throughput screening allows a wide chemical diversity to be applied in order to obtain tractable leads, which can then be optimized by the medicinal chemist. It is envisaged that these trends of continuously searching for process improvement will continue, being driven by the need to find medicines that add value in treating unmet medical need.

Drug Industry↗