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Variability and coding efficiency of noisy neural spike encoders.

Encoding synaptic inputs as a train of action potentials is a fundamental function of nerve cells. Although spike trains recorded in vivo have been shown to be highly variable, it is unclear whether variability in spike timing represents faithful encoding of temporally varying synaptic inputs or noise inherent in the spike encoding mechanism. It has been reported that spike timing variability is more pronounced for constant, unvarying inputs than for inputs with rich temporal structure. This could have significant implications for the nature of neural coding, particularly if precise timing of spikes and temporal synchrony between neurons is used to represent information in the nervous system. To study the potential functional role of spike timing variability, we estimate the fraction of spike timing variability which conveys information about the input for two types of noisy spike encoders--an integrate and fire model with randomly chosen thresholds and a model of a patch of neuronal membrane containing stochastic Na(+) and K(+) channels obeying Hodgkin-Huxley kinetics. The quality of signal encoding is assessed by reconstructing the input stimuli from the output spike trains using optimal linear mean square estimation. A comparison of the estimation performance of noisy neuronal models of spike generation enables us to assess the impact of neuronal noise on the efficacy of neural coding. The results for both models suggest that spike timing variability reduces the ability of spike trains to encode rapid time-varying stimuli. Moreover, contrary to expectations based on earlier studies, we find that the noisy spike encoding models encode slowly varying stimuli more effectively than rapidly varying ones.

Action Potentials↗

Nonlinear dynamics induced in liquid crystals in the presence of the orbital and spin angular momentum of light.

We studied the dynamical effects induced in a homeotropic nematic film when a normally incident circularly polarized light beam with an elliptical intensity profile is used. A three-dimensional dynamical model shows that, besides the spin, the orbital angular momentum of photons also plays a role in the reorientation process. Our measurements fairly reproduce the main dynamical features predicted by the model in the near threshold region. The model, however, does not work, as it is, at higher incident laser power where chaotic director rotation was reported [A. Vella, A. Setaro, B. Piccirillo, E. Santamato, Phys. Rev. E 67, 051704 (2003)].

Journal Article↗

Segmentation of thrombus in abdominal aortic aneurysms from CTA with nonparametric statistical grey level appearance modeling.

This paper presents a new method for deformable model-based segmentation of lumen and thrombus in abdominal aortic aneurysms from computed tomography (CT) angiography (CTA) scans. First the lumen is segmented based on two positions indicated by the user, and subsequently the resulting surface is used to initialize the automated thrombus segmentation method. For the lumen, the image-derived deformation term is based on a simple grey level model (two thresholds). For the more complex problem of thrombus segmentation, a grey level modeling approach with a nonparametric pattern classification technique is used, namely k-nearest neighbors. The intensity profile sampled along the surface normal is used as classification feature. Manual segmentations are used for training the classifier: samples are collected inside, outside, and at the given boundary positions. The deformation is steered by the most likely class corresponding to the intensity profile at each vertex on the surface. A parameter optimization study is conducted, followed by experiments to assess the overall segmentation quality and the robustness of results against variation in user input. Results obtained in a study of 17 patients show that the agreement with respect to manual segmentations is comparable to previous values reported in the literature, with considerable less user interaction.

Algorithms↗

An adaptive model of sensory integration in a dynamic environment applied to human stance control.

An adaptive estimator model of human spatial orientation is presented. The adaptive model dynamically weights sensory error signals. More specific, the model weights the difference between expected and actual sensory signals as a function of environmental conditions. The model does not require any changes in model parameters. Differences with existing models of spatial orientation are that: (1) environmental conditions are not specified but estimated, (2) the sensor noise characteristics are the only parameters supplied by the model designer, (3) history-dependent effects and mental resources can be modelled, and (4) vestibular thresholds are not included in the model; instead vestibular-related threshold effects are predicted by the model. The model was applied to human stance control and evaluated with results of a visually induced sway experiment. From these experiments it is known that the amplitude of visually induced sway reaches a saturation level as the stimulus level increases. This saturation level is higher when the support base is sway referenced. For subjects experiencing vestibular loss, these saturation effects do not occur. Unknown sensory noise characteristics were found by matching model predictions with these experimental results. Using only five model parameters, far more than five data points were successfully predicted. Model predictions showed that both the saturation levels are vestibular related since removal of the vestibular organs in the model removed the saturation effects, as was also shown in the e xperiments. It seems that the nature of these vestibular-related threshold effects is not physical, since in the model no threshold is included. The model results suggest that vestibular-related thresholds are the result of the processing of noisy sensory and motor output signals. Model analysis suggests that, especially for slow and small movements, the environment postural orientation can not be estimated optimally, which causes sensory illusions. The model also confirms the experimental finding that postural orientation is history dependent and can be shaped by instruction or mental knowledge. In addition the model predicts that: (1) vestibular-loss patients cannot handle sensory conflicting situations and will fall down, (2) during sinusoidal support-base translations vestibular function is needed to prevent falling, (3) loss of somatosensory information from the feet results in larger postural sway for sinusoidal support-base translations, and (4) loss of vestibular function results in falling for large support-base rotations with the eyes closed. These predictions are in agreement with experimental results.

Adaptation, Physiological↗

An animal model for altering the irritability threshold of normal skin.

Theory behind conditioned hyperirritability (autoeczematization) predicts the lowering of the irritation threshold in the presence of a pre-existing dermatitis. We have attempted to develop an animal model that parallels the syndrome seen in man. Groups of 10 guinea pigs were shaved and depilated; irritation thresholds to benzalkonium chloride and trichloroacetic acid were determined using 1 cm diameter open patches. Reactions were scored 24 h later on the basis of erythema and induration. Animals having as little as 1.56 cm2 of skin acutely inflamed with a known irritant had lowered irritation thresholds to the same irritant on normal skin at remote sites (p less than 0.01). Mild irritation of a much larger surface area produced the same effect (p less than 0.01). More extensive, severe dermatitis did not lower the irritation threshold further. Acute dermatitis induced by a contact allergen (DNCB) lowered the irritation threshold of normal skin to the same level as that obtained with irritants (p less than 0.01). Induction of chronic cutaneous ulcers 3-4 cm in diameter lowered the irritation threshold of normal skin to the same point defined by the acute studies (p less than 0.01). These results indicate that an acute irritant or contact dermatitis, as well as chronic skin ulceration, may alter the reactivity of unaffected normal skin to exhibit a heightened response to irritation. This model appears to differ from that seen in humans, in that a more extensive or chronic dermatitis did not further heighten the susceptibility to irritation.

Animals↗

A signal-to-noise ratio model for the speech-reception threshold of the hearing impaired.

This paper reviews the results of a series of investigations inspired by a model of the speech-reception threshold (SRT) of hearing-impaired listeners. The model contains two parameters accounting for the SRT of normal-hearing listeners (SRT in quiet and signal-to-noise ratio corresponding to the threshold at high noise levels), two parameters describing the hearing loss (attenuation and threshold elevation in terms of signal-to-noise ratio), and three parameters describing the hearing aid (acoustic gain, threshold elevation expressed in signal-to-noise ratio, and equivalent internal noise level). Experimental data are reported for three different types of hearing impairment: presbycusis, hearing losses with a pathological origin, and noise-induced losses. The model gives an excellent description of the data. It demonstrates that for many hearing-impaired persons speech intelligibility at noise levels beyond 50 to 60 dB(A) is their main problem, whereas hearing aids are most effective below that noise level.

Auditory Threshold↗

Pastoral care for the person with dementia.

We discuss the various stages of Alzheimer's disease and related disorders (ADRD) and present a psychosocial model which spiritual caregivers can use in their ministry, the Progressively Lowered Stress Threshold (PLST) model. We argue that religious activities are very important to these patients and that spiritual caregivers can make an important contribution.

Aged↗

Effects of an impedance threshold valve upon hemodynamics in Standard CPR: studies in a refined computational model.

UNLABELLED: An impedance threshold valve (ITV) is a new airway adjunct for resuscitation that permits generation of a small vacuum in the chest during the recoil phase of chest compression. OBJECTIVES: To explore in detail the expected magnitude and the hemodynamic mechanisms of circulatory augmentation by an ITV in Standard CPR. METHOD: A 14-compartment mathematical model of the human cardiopulmonary system--upgraded to include applied chest compression force, elastic recoil of the chest wall, anatomic details of the heart and lungs, and the biomechanics of mediastinal compression--is exercised to explore the conditions required for circulatory augmentation by an ITV during various modes of CPR. RESULTS: The ITV augments systemic perfusion pressure by about 5 mmHg compared to any particular baseline perfusion pressure without the ITV. When baseline perfusion is low, owing to either diminished chest compression force, the existence of a thoracic pump mechanism of blood flow, or the presence of an effective compression threshold, then the relative improvement produced by an ITV is significant. With an ITV the heart expands into soft pericardiac tissue, which makes the heart easier to compress. CONCLUSIONS: An ITV can augment perfusion during CPR. The observed effectiveness of ITVs in the laboratory and in the clinic suggests a thoracic pump mechanism for Standard CPR, and perhaps also an effective compression threshold that must be exceeded to generate blood flow by external chest compression.

Cardiopulmonary Resuscitation↗

Theoretical effect of temperature on threshold in the Hodgkin-Huxley nerve model.

In the squid giant axon, Sjodin and Mullins (1958), using 1 msec duration pulses, found a decrease of threshold with increasing temperature, while Guttman (1962), using 100 msec pulses, found an increase. Both results are qualitatively predicted by the Hodgkin-Huxley model. The threshold vs. temperature curve varies so much with the assumptions made regarding the temperature-dependence of the membrane ionic conductances that quantitative comparison between theory and experiment is not yet possible. For very short pulses, increasing temperature has two effects. (1) At lower temperatures the decrease of relaxation time of Na activation (m) relative to the electrical (RC) relaxation time favors excitation and decreases threshold. (2) For higher temperatures, effect (1) saturates, but the decreasing relaxation times of Na inactivation (h) and K activation (n) factor accommodation and increased threshold. The result is a U-shaped threshold temperature curve. R. Guttman has obtained such U-shaped curves for 50 microsec pulses. Assuming higher ionic conductances decreases the electrical relaxation time and shifts the curve to the right along the temperature axis. Making the conductances increase with temperature flattens the curve. Using very long pulses favors effect (2) over (1) and makes threshold increase monotonically with temperature.

Animals↗

Simulation of cognitive disturbances by a dynamic threshold semantic neural network.

A neural network model with dynamic thresholds, asymmetric connections, and clustered memories simulates spread activation that is hypothesized for semantic networks in the brain. By altering the parameters of the dynamic threshold a large range of disturbances can be generated in the model. These disturbances show metaphorical resemblance to certain general clinical descriptions of mental disturbances found in psychiatric patients engaged in various cognitive tasks. Even though the model is highly theoretical and metaphoric, it may help to gain certain insights into the relation between alterations of certain neural parameters, for example, thresholds and connectivity, and clinical symptoms in patients.

Algorithms↗

Static versus dynamic predictions of protective stepping following waist-pull perturbations in young and older adults.

The purposes of this study were: (1) to determine the frequency of protective stepping for balance recovery in subjects of different ages and fall-status, and (2) to compare predicted stepping based on a dynamic model (Pai and Patton, 1997. Journal of Biomechanics 30, 347 354) involving displacement and velocity combinations of the center of mass (COM) versus a static model based on displacement alone against experimentally induced stepping. Responses to three different magnitudes of forward waist pulls were recorded for 13 young, 18 older-non-fallers and 18 older-fallers. The COM phase plane trajectories derived from motion analysis were compared with the model-predicted threshold values for stepping. We found that the older fallers had the highest percentage of stepping trials (52%), followed by older-non-fallers (17.3%), and young (2.7%) at the lowest perturbation level. Younger subjects stepped less often than the elderly at the middle level. Everyone consistently stepped at the highest level of perturbation. Overall, the dynamic model showed better predictive capacity (65%) than the static model (5%) for estimating the initiation of stepping. Furthermore, the threshold for step initiation derived from the dynamic model could consistently predict when a step must occur. However, it was limited, especially among older fallers at the low perturbation level, in that it considered some steps 'unnecessary' that were presumably triggered by fear of falling or other factors.

Accidental Falls↗

A temporal model for early vision that explains detection thresholds for light pulses on flickering backgrounds.

A model is presented for the early (retinal) stages of temporal processing of light inputs in the visual system. The model consists of a sequence of three adaptation processes, with two instantaneous nonlinearities in between. The three adaptation processes are, in order of processing of the light input: a divisive light adaptation, a subtractive light adaptation, and a contrast gain control. Divisive light adaptation is modeled by two gain controls. The first of these is a fast feedback loop with square-root behavior, the second a slow feedback loop with logarithm-like behavior. This can explain several aspects of the temporal behavior of photoreceptor outputs. Subtractive light adaptation is modeled by a high-pass filter equivalent to a fractional differentiation, and it can explain the attenuation of low frequencies observed in ganglion cell responses. Contrast gain control in the model is fast (Victor, 1987), and can explain the decreased detectability of test signals that are superimposed on dynamic backgrounds. We determine psychophysical detection thresholds for brief test pulses that are presented on flickering backgrounds, for a wide range of temporal modulation frequencies of these backgrounds. The model can explain the psychophysical data for the full range of modulation frequencies tested, as well as detection thresholds obtained for test pulses on backgrounds with increment and decrement steps in intensity.

Adaptation, Ocular↗

Testing quantitative models of binocular disparity selectivity in primary visual cortex.

Disparity-selective neurons in striate cortex (V1) probably implement the initial processing that supports binocular vision. Recently, much progress has been made in understanding the computations that these neurons perform on retinal inputs. The binocular energy model has been highly successful in providing a simple theory of these computations. A key feature of the energy model is that it is linear until after inputs from the two eyes are combined. Recently, however, a modified version of the energy model, incorporating threshold nonlinearities before binocular combination, has been proposed to account for the weaker disparity tuning observed with anticorrelated stimuli. In this study, we present new data needed for a critical assessment of these two models. We compare two key predictions of the models with responses of disparity-selective neurons recorded from V1 of awake fixating monkeys. We find that the original energy model, and a family of generalizations retaining linear binocular combination, are quantitatively inconsistent with the response of V1 neurons. In contrast, the modified version incorporating threshold nonlinearities can explain both sets of observations. We conclude that the energy model can be reconciled with experimental observations by adding a threshold before binocular combination. This gives us the clearest picture yet of the computation being carried out by disparity-selective V1 neurons.

Action Potentials↗

Time courses in visual-information processing: some empirical evidence for inhibition.

In the literature two different views on the time course of activation of "recognition units"--hypothetical units that represent identity information--are proposed. The first view assumes that the recognition units accumulate activation gradually over time. The second assumes that the activation levels increase fast initially and then start to decrease. Hagenzieker and Van der Heijden (1990) have proposed a more general information-processing model, which is compatible with both views. In this model a threshold determines what type of time course will be obtained. For below-threshold-activation values a gradual accumulation of activation will be found; for above-threshold values activation levels will first increase and then, because of inhibition, decrease. This model served as a starting-point for the present paper. Elaboration of this model led to two testable hypotheses with regard to identification performance. The first prediction is that evidence for inhibition should be observed only under relatively bright luminance conditions. The second is that, given inhibition, the amount of the effect of this inhibition should increase over time. A partial-report bar-probe task was used to test the predictions. The experiment involved two luminance conditions and the information was sampled at two different moments in time. To control for possible localization artefacts a digit-naming task was also used. Evidence for inhibition was found in both luminance conditions. In accordance with the model the amount of the effect of inhibition increased over time.

Adult↗

Sensitivity to interaural correlation of single neurons in the inferior colliculus of guinea pigs.

Sensitivity to changes in the interaural correlation of 50-ms bursts of narrowband or broadband noise was measured in single neurons in the inferior colliculus of urethane-anaesthetized guinea pigs. Rate vs. interaural correlation functions (rICFs) were measured using two methods. These methods compensated in different ways for the inherent variance in interaural correlation between tokens with the same expected correlation. The shape of all rICFs could be best described by power functions allowing them to be summarized by two parameters. Most rICFs were best fit by a power below 2, indicating that they were only slightly nonlinear. However, there were a few fitted functions that had a power of 3-6, indicating marked curvature. Modeling results indicate that the nonlinearity of the majority of rICFs was explicable in terms of the monaural transduction stages; however, some of the rICFs with power greater than 2 require either multiple inputs to the coincidence detector or additional nonlinearities to be included in the model. Discrimination thresholds were estimated at reference correlations of -1, 0, and +1 using receiver operating characteristic (ROC) analysis of the spike-count distribution at each correlation. Thresholds spanned the full possible range, from a minimum of 0.1 to the maximum possible of 2. Thresholds were generally highest with a reference correlation of -1, intermediate with a reference of 0, and lowest with a reference correlation of +1. Thresholds were lowest for the most steeply sloped rICFs, but thresholds were not strongly correlated to the spike rate variance. The lowest thresholds occurred using narrowband noise that was compensated for internal delays, but they were still about three times larger than human psychophysical thresholds measured using similar stimuli. The data suggest that, unlike pure tone interaural time difference, discrimination of a population measure is required to account for behavioral interaural correlation discrimination performance.

Anesthesia↗

Aging selectively impairs recollection in recognition memory for pictures: evidence from modeling and receiver operating characteristic curves.

Young and older adults were tested on recognition memory for pictures. The Yonelinas high threshold (YHT) model, a formal implementation of 2-process theory, fit the response distribution data of both young and older adults significantly better than a normal unequal variance signal-detection model. Consistent with this finding, nonlinear z-transformed receiver operating characteristic curves were obtained for both groups. Estimates of recollection from the YHT model were significantly higher for young than for older adults. This deficit was not a consequence of a general decline in memory; older adults showed comparable overall accuracy and in fact a nonsignificant increase in their familiarity scores. Implications of these results for theories of recognition memory and the mnemonic deficit associated with aging are discussed.

Adult↗

Chaotic dynamics from interspike intervals.

Considering two different mathematical models describing chaotic spiking phenomena, namely, an integrate-and-fire and a threshold-crossing model, we discuss the problem of extracting dynamics from interspike intervals (ISIs) and show that the possibilities of computing the largest Lyapunov exponent (LE) from point processes differ between the two models. We also consider the problem of estimating the second LE and the possibility to diagnose hyperchaotic behavior by processing spike trains. Since the second exponent is quite sensitive to the structure of the ISI series, we investigate the problem of its computation.

Journal Article↗