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PubMed2006

Comparative study of donor atom effects on the thermodynamic and electron-transfer kinetic properties of copper(II/I) complexes with sexadentate macrocyclic ligands. [CuII/I([18]aneS4N2)] and [CuII/I([18]aneS4O2)].

Studies have been conducted on the copper complexes formed with two sexadentate macrocyclic ligands containing four thioether sulfur donor atoms plus either two nitrogen or two oxygen donor atoms on opposing sides of the ring. The resulting two ligands, L, designated as [18]aneS(4)N(2) and [18]aneS(4)O(2), respectively, represent homologues of the previously studied Cu(ii/i) system with a macrocycle having six sulfur donor atoms, [18]aneS(6). Crystal structures of [Cu(II)([18]aneS(4)O(2))](ClO(4))(2) and [Cu(I)([18]aneS(4)O(2))]ClO(4) have been determined in this work. Comparison of the structures of all three systems reveals that the oxidized complexes are six coordinate with two coordinate bonds undergoing rupture upon reduction. However, the geometric changes accompanying electron transfer appear to differ for the three systems. The stability constants and electrochemical properties of both of the heteromacrocyclic complexes have been determined in acetonitrile and the Cu(II/I)L electron-transfer kinetics have been studied in the same solvent using six different counter reagents for each system. The electron self-exchange rate constants have then been calculated using the Marcus cross relationship. The results are compared to other Cu(II/I)L systems in terms of the effect of ligand geometric changes upon the overall kinetic behavior.

Journal Article↗

PubMed2006

Molecular beam rotational spectrum of cyclobutanone-trifluoromethane: nature of weak CH...O=C and CH...F hydrogen bonds.

The molecular beam Fourier transform microwave spectrum of cyclobutanone-trifluoromethane has been assigned and measured. The carbon atom of trifluoromethane lies in the plane of the heavy atoms of cyclobutanone. The complex is stabilized by one C-H...O=C and two C-H...F-C weak hydrogen bonds. The C-H...O=C interaction, involving one carbonylic oxygen, is studied for the first time in detail with rotationally resolved spectroscopy. The two C-H...F-C weak hydrogen bonds involve two fluorine atoms of trifluoromethane and two hydrogens of the same methylenic group in the alpha position.

Chlorofluorocarbons, Methane↗

PubMed2004

Ru3(CO)12-catalyzed silylation of benzylic C-H bonds in arylpyridines and arylpyrazoles with hydrosilanes via C-H bond cleavage.

Ruthenium-catalyzed silylation of sp3 C-H bonds at a benzylic position with hydrosilanes gave benzylsilanes. For this silylation reaction, Ru3(CO)12 complex showed high catalytic activity. This silylation proceeded at the methyl C-H bond selectively. For this silylation reaction, pyridyl and pyrazolyl groups, and the imino group in hydrazones, can function as a directing group. Several hydrosilanes involving triethyl-, dimethylphenyl-, tert-butyldimethyl-, and triphenylsilanes can be used as a silylating reagent. Coordination of an sp2 nitrogen atom to the ruthenium complex is important for achieving this silylation reaction.

Journal Article↗

PubMed1998

The mechanism of regulation of hexokinase: new insights from the crystal structure of recombinant human brain hexokinase complexed with glucose and glucose-6-phosphate.

BACKGROUND: Hexokinase I is the pacemaker of glycolysis in brain tissue. The type I isozyme exhibits unique regulatory properties in that physiological levels of phosphate relieve potent inhibition by the product, glucose-6-phosphate (Gluc-6-P). The 100 kDa polypeptide chain of hexokinase I consists of a C-terminal (catalytic) domain and an N-terminal (regulatory) domain. Structures of ligated hexokinase I should provide a basis for understanding mechanisms of catalysis and regulation at an atomic level. RESULTS: The complex of human hexokinase I with glucose and Gluc-6-P (determined to 2.8 A resolution) is a dimer with twofold molecular symmetry. The N- and C-terminal domains of one monomer interact with the C- and N-terminal domains, respectively, of the symmetry-related monomer. The two domains of a monomer are connected by a single alpha helix and each have the fold of yeast hexokinase. Salt links between a possible cation-binding loop of the N-terminal domain and a loop of the C-terminal domain may be important to regulation. Each domain binds single glucose and Gluc-6-P molecules in proximity to each other. The 6-phosphoryl group of bound Gluc-6-P at the C-terminal domain occupies the putative binding site for ATP, whereas the 6-phosphoryl group at the N-terminal domain may overlap the binding site for phosphate. CONCLUSIONS: The binding synergism of glucose and Gluc-6-P probably arises out of the mutual stabilization of a common (glucose-bound) conformation of hexokinase I. Conformational changes in the N-terminal domain in response to glucose, phosphate, and/or Gluc-6-P may influence the binding of ATP to the C-terminal domain.

Adenosine Triphosphate↗

PubMed2002

Mutations of basic arginine residue 334 in the D1 protein of Photosystem II lead to unusual S(2) state properties in Synechocystis sp. PCC 6803.

The C-terminus region of the D1 protein of Photosystem II (PS II) is situated on the lumenal side of the complex and is likely to be involved in the coordination of the active site Mn atoms of the water oxidation complex (WOC). The strictly conserved arginine at position 334 (D1-334) was targeted for site-directed mutagenesis to explore the hypothesis that it is involved in the PS II extrinsic protein binding, chloride binding, or proton transfer. Although it was found that D1-R334 probably not essential for these functions, mutations at this position were found to uniquely alter the kinetics of S-state cycling in general and the properties of the S(2) state in particular. Substitutions of a glutamate (D1-R334E) and a valine (D1-R334V) for D1-R334 lead to an unusually stable (t (1/2) >30 min at room temp) S(2) state, but not S(3), as measured by double flash measurements on the bare platinum electrode. However, measurements of fluorescence decay in the presence of DCMU suggest the S(2) state is only modestly affected by the mutations. Possible reasons for these apparently contradictory results are discussed.

Journal Article↗

PubMed1979

Studies on gene control regions XII. The functional significance of a lac operator constitutive mutation.

The functional significance of a lac operator constitutive mutation has been determined. The transition adenine-thymine to guanine-cytosine was shown to be a constitutive mutation simply because thymine contains the functionally important 5-methyl group whereas cytosine does not. The remainder of the base pair is of no consequence. The experimental approach was to synthesize various modified operators containing cytosine, 5-methyl-cytosine, and 5-bromocytosine. The synthetic operator containing a guanine-cytosine base pair displays an eightfold reduction in stability with lac repressor whereas the operator containing 5-methylcytosine binds repressor at least as tightly as does the wild type sequence. Results published previously have shown that a similar decrease in stability of the repressor-operator complex can be obtained simply by substituting uracil for thymine or by inverting the base pair to thymine-adenine. All these results taken together implicate the thymine 5-methyl as the only important functional group recognized by the lac repressor at this base pair. Further confirmation of this conclusion was obtained by substitution of 5-bromocytosine and 5-bromouracil at this base pair. Both altered the stability of the repressor-operator complex by about the same percent suggesting that the bromine atom was the important determinant of complex stability for 5-bromopyrimidine analogs.

Base Sequence↗

PubMed2000

Synthesis and characterization of six-coordinate "3 + 2" mixed-ligand oxorhenium complexes with the o-diphenylphosphinophenolato ligand and tridentate coligands of different N and S donor atom combinations.

A series of octahedral six-coordinate oxorhenium(V) mixed ligand complexes containing the common [ReO(L)]2+ fragment (L = o-OC6H4P(C6H5)2] have been synthesized and characterized. Hence, it was shown that the [ReO(L)]2+ moiety can accommodate a variety of tridentate ligands containing a central amine group amenable to deprotonation and different combinations of lateral groups, such as ethylamine, substituted ethylamine, ethylthiol, and ethylthioether arms. In particular, by reaction of equimolar amounts of the pertinent HLn ligands with the [(n-C4H9)4N][ReOCl3(L)] precursor in refluxing acetonitrile/methanol or dichloromethane/methanol mixtures, the following series of [ReO(Ln)(L)]+/0 oxorhenium(V) complexes has been generated: ReO[[N(CH2CH2NH2)2][o-OC6H4P(C6H5)2]]Cl (1); ReO[[C2H5)2NCH2CH2NCH2CH2S][o-OC6H4P5)2]] (2); ReO[[(CH2)4NCH2CH2NCH2CH2S][o-OC6H4P(C6H4P(C6H5)2]] (3); and ReO[[C2H5SCH2CH2NCH2CH2S][o-OC6H4P(C6H5)2]] (4). The complexes are closed-shell 18-electron oxorhenium species, which adopt octahedral geometries both in solution and in the solid state, as established by conventional physicochemical techniques including multinuclear NMR and single-crystal X-ray diffraction analyses.

Journal Article↗

PubMed2002

Interference of serum with lipoplex-cell interaction: modulation of intracellular processing.

We have investigated the mechanism of lipoplex-mediated transfection, employing a dialkyl pyridinium surfactant (SAINT-2), and using serum as a modulator of complex stability and processing. Particle size and stability determine lipoplex internalization, the kinetics of intracellular processing, and transfection efficiency. Clustered SAINT-2 lipoplexes are obtained in the absence of serum (-FBS lipoplexes), but not in its presence (+FBS lipoplexes), or when serum was present during lipoplex formation [FBS], conditions that mimic potential penetration of serum proteins. The topology of DNA in [FBS] lipoplexes shifts from a supercoiled, as in -FBS lipoplexes, to a predominantly open-circular conformation, and is more prone to digestion by DNase. Consistently, atomic force microscopy revealed complexes with tubular extensions, reflecting DNA that protrudes from the lipoplex surface. Interestingly, the internalization of [FBS] lipoplexes is approximately three-fold higher than that of -FBS and +FBS lipoplexes, yet their transfection efficiency is approximately five-fold lower. Moreover, in contrast to -FBS and +FBS complexes, [FBS] complexes were rapidly processed into the late endosomal/lysosomal degradation pathway. Intriguingly, transfection by [FBS] complexes is greatly improved by osmotic rupture of endocytic compartments. Our data imply that constraints in size and morphology govern the complex' ability to interact with and perturb cellular membranes, required for gene release. By extrapolation, we propose that serum may regulate these parameters in an amphiphile-dependent manner, by complex 'penetration' and modulation of DNA conformation.

Animals↗

PubMed1996

Analytical applications of retinoid-cyclodextrin inclusion complexes. 1. Characterization of a retinal-beta-cyclodextrin complex.

In studies in these laboratories on the supramolecular chemistry of the retinoids, it has been recently confirmed that inclusion of these substances within the cavity of cyclodextrins protects their excited states, thus improving their photochemical stability. In the present paper, the isolation is described of a crystalline stable complex between retinal and beta-cyclodextrin, which has been characterized by means of several techniques including atomic force microscopy (AFM). The complex shows distinct spectroscopic differences from both retinal and beta-cyclodextrin. Thus, it absorbs at lambda(max) = 380 nm in water whereas retinal is insoluble; it shows room-temperature luminescence, which retinal does not; finally, it give 1H-NMR and 13C-NMR spectra in d6-DMSO with clear differences in chemical shifts with respect to those of beta-cyclodextrin. Besides these studies in solution, the behaviour of the complex in the solid state has been compared with that of physical mixtures of retinal and beta-cyclodextrin. IR spectroscopy shows clear differences, particularly a shift in the retinal carbonyl absorption (1644-1672 cm-1). AFM studies reveal the existence of aggregates; X-ray diffractometry also supports the formation of a cyclodextrin-retinal complex.

Cyclodextrins↗

PubMed1989

Lipoxygenase isoenzymes: a spectroscopic and structural characterization of soybean seed enzymes.

Applying recent developments in protein purification techniques, a number of lipoxygenase isoenzymes have been isolated in satisfactory quantities for a detailed physical and structural characterization. Four seed isoenzymes from two soybean cultivars have been studied by peptide mapping, free thiol and iron content determinations, and C-terminal analysis as well as by uv-visible absorption and EPR spectroscopy. While differences between the type 1 enzyme and the other isoenzymes were readily detected using proteolytic peptide mapping, digestion with dilute hydrochloric acid and C-terminal analysis both revealed structural features which were similar in all of the isoenzymes. One clear difference between the lipoxygenases was in their free sulfhydryl group content. The uv-visible absorption spectrum of each native isoenzyme was consistent with expectations for the experimental aromatic amino acid content. All of the isoenzymes contained one non-heme iron atom per molecule of protein. The oxidation of each isoenzyme with product hydroperoxide resulted in the conversion of the iron from an EPR silent state into several forms with EPR signals characteristic of high spin iron(III). The EPR spectra of all isoenzymes were remarkably similar. A time course EPR and catalytic activity study revealed that the various EPR active states represent a complex equilibrium between iron atoms in different environments. The pH dependence for the EPR and absorption spectroscopy lends support to the hypothesis that acid/base chemistry represents an important aspect of lipoxygenase catalysis.

Catalysis↗

PubMed2002

Synthesis, structure, and photophysical studies of luminescent two- and three-dimensional gold-thallium supramolecular arrays.

The reactions of tetrahydrofuran solutions of NBu(4)[AuR(2)] (R = C(6)F(5), C(6)Cl(5)) with TlPF(6) and 4,4'-bipyridine lead to the synthesis of the luminescent materials [Tl(bipy)](2)[Au(C(6)F(5))(2)](2) 1 and [Tl(bipy)][Tl(bipy)(0.5)(thf)][Au(C(6)Cl(5))(2)](2) 2 in high yield. The structures of these complexes, as analyzed by X-ray diffraction, consist of planar polymers formed by repetition of Tl-Au-Au-Tl (1) or Tl-Au-Tl'-Au (2) moieties linked through bidentate bridging bipy ligands. In complex 1 these layers are associated via Tl...F contacts between atoms of adjacent planes, whereas in complex 2 each two polymeric layers are linked through additional bridging bipy molecules. Both complexes are strongly luminescent at room temperature and at 77 K in the solid state, losing this characteristic in solution even at high concentrations. The luminescence is attributed to interactions between metal atoms which are strongly affected by their structural dispositions. DFT calculations are in accord with the observed experimental behavior, showing the nature of the orbitals involved in each transition. Detailed analyses reveal a substantial participation of the metals in the transition giving rise to the emission maxima, and also other more energetic bands in which the ligands are involved and which also give rise to these emissions. The obtained theoretical excitation spectra clearly match the experimental results.

Journal Article↗

PubMed1997

Synthesis and Structural Characterization of Five-, Six-, and Seven-Coordinate Manganese(II) Complexes of the Tripodal Ligand Tris(2-benzimidazolylmethyl)amine.

A series of manganese(II) tris(2-benzimidazolylmethyl)amine (ntb) complexes were synthesized and characterized. In these complexes, ntb functions as a tripodal tetradentate ligand, resulting in trigonal pyramidal geometry. The complexes have five- to seven-coordinate manganese(II) ions depending on the additional ligand used. In each complex, an additional ligand, chloride anion, acetate anion, or nitrite anion, is coordinated at the "opened" site trans to the apical tertiary nitrogen atom of the ntb ligand. Complex 1, Mn(II)(ntb)Cl]Cl, has trigonal bipyramidal geometry. This geometry, corresponding to the active-site geometry of native manganese superoxide dismutase, was easily constructed using ntb as a tetradentate ligand and chloride as a monodentate ligand. Complex 2, [Mn(II)(ntb)(OAc)]Cl, was synthesized using ntb as a tetradentate ligand and acetate as a chelating bidentate ligand. The seven-coordinate complex [Mn(II)(ntb)(NO(2))(2)], 3, was also synthesized using ntb as a tetradentate ligand and nitrites as both monodentate and bidentate ligands. In each case, up to three donor atoms could be accommodated by the "opened" site without significant disturbance to the trigonal pyramidal portion of the complex. Crystal data are as follows. [Mn(II)(ntb)Cl]Cl.2.5MeOH, 1: triclinic space group P&onemacr;; a = 13.388(2) Å, b = 14.427(2) Å, c = 17.595(3) Å; alpha = 79.13(1) degrees, beta = 83.28(2) degrees, gamma = 66.02(2) degrees; V = 3046.3(8) Å(3); Z = 4; R1 = 0.0786, wR2 = 0.2063 for reflections of I > 2sigma(I). [Mn(II)(ntb)(OAc)]Cl.0.5MeOH.3.25H(2)O, 2: triclinic space group P&onemacr;; a = 13.308(1) Å, b = 14.689(2) Å, c = 18.335(2) Å; alpha = 75.48(1) degrees, beta = 79.21(1) degrees, gamma = 62.99(1) degrees; V = 3195.7(6) Å(3); Z = 4; R1 = 0.0899, wR2 = 0.2594 for reflections of I > 2sigma(I). [Mn(II)(ntb)(NO(2))(2)].4MeOH, 3: monoclinic space group P2(1)/n; a = 14.484(14) Å, b = 15.454(14) Å, c = 14.925(11) Å; beta = 114.86(6) degrees; V = 3031(5) Å(3); Z = 4; R1 = 0.0748, wR2 = 0.1614 for reflections of I > 2sigma(I).

Journal Article↗

PubMed1978

Electronic and resonance Raman spectra of iron(III) complexes of enterobactin, catechol, and N-methyl-2,3-dihydroxybenzamide.

Resonance Raman electronic absorption and circular dichroism spectra and pH titration curves are reported for the trianionic ferric complexes of enterobactin, catechol, and N-methyl-2,3-dihydroxybenzamide (MDHB). The spectral signatures of the enterobactin and MDHB complexes are virtually identical and differ from those of the catechol complex in ways that reflect the influence of the amide group on the electronic structure. Excitation in either the visible charge-transfer bands or the near-ultraviolet pi-pi* bands enhances Raman bands associated with benzene ring modes, although the relative enhancements differ markedly in the two regions. The data stronly support a structural model in which iron is bound exclusively to the phenolate oxygen atoms in all three complexes.

Benzamides↗

PubMed2002

Supramolecular assemblies of dimetal complexes with polydentate N-donor ligands: from a discrete pyramid to a 3D channel network.

Reactions of a dinuclear metal complex in the form of dirhodium(II) tetra(trifluoroacetate), [Rh(2)(O(2)CCF(3))(4)] (1), with a number of strong N-donor ligands having functional groups rigidly oriented at different directing angles have been found to yield supramolecular architectures of differing complexity. All structures have been established by X-ray crystallography. From reaction of 1 with neutral tris(4'-pyridyl)methylsilane ligand, CH(3)Si(C(5)H(4)N)(3) (L1), a discrete pyramid-shaped hexanuclear complex [[Rh(2)(O(2)CCF(3))(4)](3)CH(3)Si(C(5)H(4)N)(3)(eta(1)-C(6)H(6))(3)].C(6)H(6) (2.C(6)H(6)) has been isolated from benzene. In 2 three molecules of 1 are strongly coordinated to one L1 ligand at only one axial position of each dirhodium unit at the Rh-N distances of 2.152(6) A. The second rhodium atom of each dimetal complex in 2 weakly coordinates a benzene molecule with an Rh-C distance of 2.69(2) A. A supramolecular complex of the composition [[Rh(2)(O(2)CCF(3))(4)](2)(C(6)H(5))(2)Si(C(5)H(4)N)(2)] (3) has been prepared by reacting the dinuclear units 1 with a potentially bidentate ligand, bis(4'-pyridyl)diphenylsilane, (C(6)H(5))(2)Si(C(5)H(4)N)(2) (L2), having two pyridyl groups rigidly oriented at 109 degrees. In 3, one L2 ligand coordinates two dirhodium molecules 1 through their axial positions with the Rh-N distance of 2.150(5) A. An interesting extended 2D layered motif is formed by additional contacts of open axial positions of dirhodium units with phenyl groups of the neighboring ligands at Rh-C distances which average to 2.88(1) A. A supramolecular compound of the composition [[Rh(2)(O(2)CCF(3))(4)](3)(HO)C(C(5)H(4)N)(3)(eta(1)-C(6)H(6))].(1)/(2)C(6)H(6) (4.(1)/(2)C(6)H(6)) has been formed when linear dirhodium units 1 were reacted with tris(4'-pyridyl)methanol (L3) having tetrahedral directing angles that average to 110 degrees. A building block in the solid structure of 4 is a hexanuclear molecule in which one L3 ligand binds three dimetal units of 1 through N atoms of pyridyl groups at the average Rh-N distance of 2.143(7) A. A unique extended pseudo-3D structure in 4 is created by additional Rh-O coordination bonds as well as by weak metal-arene interactions.

Journal Article↗

PubMed2003

AFM study of potato virus X disassembly induced by movement protein.

Recently we have reported that a selective binding of potato virus X (PVX)-coded movement protein (termed TGBp1 MP) to one end of a polar coat protein (CP) helix converted viral RNA into a translatable form and induced a linear destabilization of the whole helical particle. Here, the native PVX virions, RNase-treated (PVX(RNA-DEG)) helical particles lacking intact RNA and their complexes with TGBp1 (TGBp1-PVX and TGBp1-PVX(RNA-DEG)), were examined by atomic force microscopy (AFM). When complexes of the TGBp1 MP with PVX were examined by means of AFM in liquid, no structural reorganization of PVX particles was observed. By contrast, the products of TGBp1-dependent PVX degradation termed "beads-on-string" were formed under conditions of AFM in air. The AFM images of PVX(RNA-DEG) were indistinguishable from images of native PVX particles; however, the TGBp1-dependent disassembly of the CP-helix was triggered when the TGBp1-PVX(RNA-DEG) complexes were examined by AFM, regardless of the conditions used (in air or in liquid). Our data supported the idea that binding of TGBp1 to one end of the PVX CP-helix induced linear destabilization of the whole helical particle, which may lead to its disassembly under conditions of AFM.

Capsid Proteins↗

PubMed2004

Enantiomeric and mesomeric mandelate complexes of molybdenum -- on their stereospecific formations and absolute configurations.

The stereospecific formation and absolute configuration of R-homocitrate coordinated FeMo-co in nitrogenase was mimicked through the structural analyses of a collection of enantiomeric and mesomeric mandelato molybdenum complexes, i.e., (NH(4))(2)[Mo(Delta)O(2)(R-mand)(2)]x3H(2)O (1a), (NH(4))(2)[Mo(Lambda)O(2)(S-mand)(2)]x3H(2)O (1b), (NH(4))(4)[Mo(Delta)O(2)(RS-mand)(2)][Mo(Lambda)O(2)(RS-mand)(2)]x8H(2)O (2), (NH(4))(2)[W(Delta)O(2)(R-mand)(2)]x2H(2)O (3a), (NH(4))(2)[W(Lambda)O(2)(S-mand)(2)]x2H(2)O (3b) (H(2)mand=mandelic acid, C(8)H(8)O(3)), which have been characterized by elemental analyses, optical rotation, circular dichroism, IR, NMR spectroscopes and X-ray single crystal studies. The R and S chiral mandelic acids induce the formations of the enantiomeric pair of chiral complexes, which are supported by the characterizations of optical rotation and circular dichroism. The configuration of the resulted metal center could be assigned as Delta or Lambda. While the RS racemic reagent yields only mesomeric compound. The Delta(R,R)-complexes 1a and 3a are enantiomers of Lambda(S,S)-1b and 3b, respectively. Of the five complexes, Mo and W atoms are all hexa-coordinated by two cis-oxo groups and two bidentate mandelate ligands through the deprotonated alpha-alkoxyl and alpha-carboxyl groups, forming a stable five-membered chelated rings. The average Mo(VI)-O bond distances with alpha-alkoxyl and alpha-carboxyl are 1.944 and 2.210 A, respectively. Further comparison indicates that bonds of alpha-alkoxyl groups in the hydroxycarboxylato molybdenum complexes are much sensitive to the change in the oxidation state of molybdenum, which support the possible Mo activation model in FeMo-co through the protonation and cleavage of alpha-alkoxyl group in homocitrate ligand.

Journal Article↗

PubMed2006

Synthesis of the novel [W3PdS4H3(dmpe)3(CO)]+ cubane cluster and kinetic studies on the substitution of coordinated hydrides in acidic media.

Reaction of the incomplete cuboidal [W3S4H3(dmpe)3]+ cluster with a Pd(0) complex under a CO atmosphere produces a rare example of a heterodimetallic hydrido cluster of formula [W3PdS4H3(dmpe)3(CO)]+ ([1]+). There are not significant changes in the W-W bond lengths on going from the trinuclear to the tetranuclear cluster. The average W-W and W-Pd bond distances of 2.769[10] and 2.90[2] A, respectively, are consistent with the presence of single bonds between metal atoms. The heterodimetallic [1]+ complex is easier to oxidize and more difficult to reduce than its trinuclear precursor, which reflects the electron-donating capability of the Pd(CO) fragment. However, mechanistic studies on the reaction of [1]+ with acids show a lower basicity for this complex in comparison with that of its trinuclear precursor, so there is a major electron-density rearrangement within the cluster core upon Pd(CO) coordination. This rearrangement is also reflected in an unusual expansion of the sulfur tetrahedron within the W3PdS4 core with the concomitant elongation of the W-S bond distances by 0.04 A with respect to the analogous bond lengths in the trinuclear precursor. For those thermodynamically favored proton-transfer processes, the reaction mechanism of [1]+ with acids is quite similar to that observed for the incomplete trinuclear cluster, with only small changes in the rate constants. The reaction of [1]+ with HCl in acetonitrile/water mixtures produces [W3PdS4Cl3(dmpe)3(CO)]+ ([2]+) in two kinetically distinguishable steps. Proton transfer occurs in the initial step, in which the W-H bonds are attacked by the acid to yield dihydrogen-bonded adducts that are further attacked by an acetonitrile molecule to give [W3PdS4(CH3CN)3(dmpe)3(CO)]4+ and dihydrogen. The nature of processes involved in the second step are not well-understood with the present data, although it is very likely that these correspond to some secondary processes. In the third resolved step, the coordinated CH3CN ligands in [W3PdS4(CH3CN)3(dmpe)3(CO)]4+ are substituted by Cl- to afford the final [2]+ product. No reaction is observed between [1]+ and HCl in neat acetonitrile, whereas the product of the reaction of [1]+ with HBF4 or Hpts (pts- = p-toluenesulfonate) in this solvent is [W3PdS4(CH3CN)3(dmpe)3(CO)]4+. The reaction occurs in a single kinetic step with a first- (Hpts) or second-order (HBF4) dependence with respect to the acid. The first- and second-order acid dependences can be interpreted through the initial formation of dihydrogen adducts with one or two acid molecules, respectively.

Journal Article↗

PubMed2005

Crystallization of mitochondrial respiratory complex II from chicken heart: a membrane-protein complex diffracting to 2.0 A.

A procedure is presented for preparation of diffraction-quality crystals of a vertebrate mitochondrial respiratory complex II. The crystals have the potential to diffract to at least 2.0 A with optimization of post-crystal-growth treatment and cryoprotection. This should allow determination of the structure of this important and medically relevant membrane-protein complex at near-atomic resolution and provide great detail of the mode of binding of substrates and inhibitors at the two substrate-binding sites.

Animals↗