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In vivo high resolution three-dimensional imaging of antigen-specific cytotoxic T-lymphocyte trafficking to tumors.

Magnetic resonance imaging (MRI) allows noninvasive and three-dimensional visualization of whole organisms over time, and, therefore, would be ideally suited to monitor cell trafficking in vivo. Until now, systemically injected cells had been difficult to visualize by MRI because of relatively inefficient labeling methods. We developed a novel, biocompatible, and physiologically inert nanoparticle (highly derivatized cross-linked iron oxide nanoparticle; CLIO-HD) for highly efficient intracellular labeling of a variety of cell types that now allows in vivo MRI tracking of systemically injected cells at near single-cell resolution. CD8+ cytotoxic T lymphocytes labeled with CLIO-HD were detectable via MRI with a detection threshold of 2 cells/voxel in vitro and approximately 3 cells/voxel in vivo in live mice. Using B16-OVA melanoma and CLIO-HD-labeled OVA-specific CD8+ T cells, we have demonstrated for the first time high resolution imaging of T-cell recruitment to intact tumors in vivo. We have revealed the extensive three-dimensional spatial heterogeneity of T-cell recruitment to target tumors and demonstrated a temporal regulation of T-cell recruitment within the tumor. Significantly, our data indicate that serial administrations of CD8+ T cells appear to home to different intratumoral locations, and may, therefore, provide a more effective treatment regimen than a single bolus administration. Together, these results demonstrate that CLIO-HD is uniquely suited for quantitative repetitive MRI of adoptively transferred cells and that this approach may be particularly useful for evaluating novel cell-based therapies in vivo.

Animals↗

Evaluating measures to control intestinal parasitic infections.

Intestinal parasitic infections are among the most common infections of humans in developing countries, but the resources available for their control are severely limited. Careful evaluation of control measures is essential to ensure that they are cost-effective. The evaluation of the effects of control on intestinal helminths and intestinal protozoa requires an understanding of the different epidemiological patterns of these two groups of parasites. The transmission dynamics and morbidity associated with the major helminth infections (Ascaris lumbricoides, Trichuris trichiura and the hookworms) are dependent on the size of the worm burdens. Thus the important parameter for evaluating the impact of control on morbidity and transmission is the intensity of infection, which can be assessed by determining the mean density of parasite eggs in faecal specimens. Estimation of intensity is subject to systematic errors, however, due to the complex pattern of worm burden distributions. The frequency distribution of burdens is highly overdispersed, and individuals exhibit predisposition to particular levels of infection. Furthermore, mean intensity is age-dependent, in a species-specific manner, and is clustered spatially and within families. These complex patterns imply that the estimation of intensity is exceptionally sensitive to the size and demographic structure of the population sample selected for assessment. They also have the effect that prevalence estimates, the most commonly used measures of infection in communities, can seriously mislead. Paradoxically, prevalence is least useful where infection is most common because the relationship between prevalence and intensity is most markedly non-linear when the prevalence is high. Thus in areas where control is most needed, evaluation using prevalence might suggest that control had failed while evaluation by intensity would, correctly, show the measure of success. With the major protozoan infections (Entamoeba histolytica, Giardia duodenalis and Cryptosporidium parvum) an estimate of intensity is of little value and the central parameter for evaluation is prevalence. Prevalence does exhibit age and spatial heterogeneity, which may be species-specific, so there remains a need to ensure a consistent sample structure, although this is less critical than for the helminths. The major constraint on evaluating the control of protozoan infections is the need to identify pathogenic species and, in some cases, pathogenic strains. Harmless commensal protozoans are ubiquitous and often morphologically very similar to pathogens, but their control is both unnecessary and impracticable. Species such a E. histolytica appear to exist as strains with differing pathogenicity, thus control will be cost-effective only if the focus is on pathogenic strains. Effective diagnosis is therefore central to the evaluation of the control of protozoan infections.(ABSTRACT TRUNCATED AT 400 WORDS)

Adolescent↗

Distribution of anopheline mosquitoes in Eritrea.

The spatial distribution of anopheline mosquito species was studied throughout Eritrea during the 1999-2001 malaria transmission seasons from October to December for the highlands and western lowlands and February to April for the coastal region. Of the 302 villages sampled, 59 were visited in both the first and second year. Overall, 13 anopheline species were identified, with the Anopheles gambiae complex predominating during the first year (75.6%, n = 861) and the second year (91.9%, n = 1,262). Intrazonal variation accounted for 90% of the total variation in mosquito distribution. Polymerase chain reaction results indicated that 99% (n = 1,309) of the An. gambiae s.l. specimens were An. arabiensis, indicating that this was the only member of the gambiae complex present. There was a high degree of aggregation of anophelines within zones and villages, with more than 80% of the total anophelines being collected from less than 20% of the villages and from only 10% of the houses sampled. At least 80% of the anopheline mosquitoes were collected from grass-thatched Agudo-type housing. Vector abundance showed an inverse relationship with elevation, with highest densities in the low-lying western lowlands. Multiple regression analysis of log-transformed mean density of An. arabiensis with rainfall and the normalized difference vegetation index (NDVI) (average NDVI, minimum NDVI, and maximum NDVI) showed that these independent variables were not significantly associated with mosquito densities (R2 = 0.058). Our study contributes to the basic understanding of the ecology and distribution of malaria vectors with respect to species composition and spatial heterogeneities both that could be used to guide vector control operations in Eritrea.

Animals↗

[Effects of land use change on carbon storage in terrestrial ecosystem].

Terrestrial ecosystem is an important carbon pool, which plays a crucial role in carbon biogeochemical cycle. Human activities such as fossil fuel combustion and land use change have resulted in carbon fluxes from terrestrial ecosystem to the atmosphere, which increased the atmospheric CO2 concentration, and reinforced the greenhouse effect. Land use change affects the structure and function of the terrestrial ecosystem, which causes its change of carbon storage. To a great extent, the change of carbon storage lies in the type of ecosystem and the change of land use patterns. The conversion of forest to agricultural land and pasture causes a large reduction of carbon storage in vegetation and soil, and the decrease of soil carbon concentration is mainly caused by the reduction of detritus, the acceleration of soil organic matter decomposition, and the destroy of physical protection to organic matter due to agricultural practices. The loss of soil organic matter appears at the early stage after deforestation, and the loss rate is influenced by many factors and soil physical, chemical and biological processes. The conversion of agricultural land and pasture to forest and many conservative agricultural practices can sequester atmospheric carbon in vegetation and soil. Vegetation can sequester large amounts of carbon from atmosphere, while carbon accumulation in soil varies greatly because of farming history and soil spatial heterogeneity. Conservative agricultural practices such as no-tillage, reasonable cropping system, and fertilization can influence soil physical and chemical characters, plant growth, quality and quantity of stubble, and soil microbial biomass and its activity, and hence, maintain and increase soil carbon concentration.

Agriculture↗

Two components of delayed rectifier K+ current in heart: molecular basis, functional diversity, and contribution to repolarization.

Delayed rectifier K+ current (IK) is the major outward current responsible for ventricular repolarization. Two components of IK (IKr and IKs) have been identified in many mammalian species including humans. IKr plays a pivotal role in normal ventricular repolarization. A prolongation of action potential duration (APD) under a variety of conditions would favor the activation of IKs so that to prevent excessive repolarization delay causing early afterdepolarization. The pore-forming a subunits of IKr and IKs are composed of HERG (KCNH2) and KvLQT1 (KCNQ1), respectively. KvLQT1 is associated with a function-altering beta subunit, minK to form IKs. HERG may be associated with mink (KCNE1) and/or minK-related protein (MiRP1) to form IKr, but the issue remains to be established. IKs is enhanced, whereas IKr is usually attenuated by beta-adrenergic stimulation via cyclic adenosine 3',5'-monophosphate (cAMP)/protein kinase A-dependent pathways. There exist regional differences in the density of IKr and IKs transmurally (endo-epicardial) and along the apico-basal axis, contributing to the spatial heterogeneity of ventricular repolarization. A decrease of IKr or IKs by mutations in either HERG, KvLQT1, or KCNE family results in inherited long QT syndrome (LQTS) with high risk for Torsades de pointes (TdP)-type polymorphic ventricular tachycardia and ventricular fibrillation. As to the pharmacological treatment and prevention of ventricular tachyarrhythmias, selectively block of IKs is expected to be more beneficial than selectively block of IKr in terms of homogeneous prolongation of refractoriness at high heart rates especially in diseased hearts including myocardial ischemia.

Action Potentials↗

[Forest health ecological risk assessment in China].

Forest health ecological risk assessment is an important factor in forest resources management. In this paper, we selected forest fire, forest disease-pest disasters and acid rain as main risk sources, described the risk resources by probability, intensity and distributing, and mapped each risk source. The endpoints were the damages that the risk acceptor might and these damages might cause ecosystems' organization and function changing under the uncertainty risk sources. Endpoints of forest might compose of productivity descent, reducing biodiversity, forest degrading, forest ecological function declining, furthermore, forest disappearing. We described exposure in terms of intensity, space, and time. In the exposure and hazard analysis, we used fragile index to show frangibility or resistibility (resistibility is reverse to frangibility), and analyzed the damages by different risk sources. Risk assessment and management was the integrated phase of the research. Because of the spatial heterogeneity of risk sources, all risk index were overlaid in the China map by GIS, which divided the region into 30 ecological risk sub-zones (provinces), according to risk index of each risk sub-zone, and the forest in China was divided into six levels of risk zones. In every level of risk zones, we also put forward the countermeasures for forest health ecological risk management. The result of assessment could provide scientific basis for forest management.

Animals↗

Cellular automata and its advances to drug therapy for HIV infection.

This paper gives an over view of the use of cellular automata (CA) model of drug therapy for HIV infection. Nonuniform CA is employed to simulate drug treatment of HIV infection, where each computational domain may contain different CA rules, in contrast to normal uniform CA models. Ordinary (or partial) differential equation models are insufficient to describe the two extreme time scales involved in HIV infection (days and decades), as well as the implicit spatial heterogeneity. Zorzenon and Coutinho [Phy Rev Lett, 16 (2001) 1] reported a cellular automata approach to simulate three-phase patterns of human immunodeficiency virus (HIV) infection consisting of primary response, clinical latency and onset of acquired immunodeficiency syndrome (AIDS). But here we present a related model, based on non-uniform CA to study the dynamics of drug therapy of HIV infection. The main aim in this model is to simulate the four phases (acute, chronic, drug treatment responds and onset of AIDS). The results shown here indicate that both simulations (with and without treatments) evolve to the relatively same steady state (characteristics of Wolfram's class II behavior). Different kinds of drug therapies can also be simulated in this model, which can be found useful for developing a proper drug therapy.

Anti-HIV Agents↗

[A model of protectability of the ISS service module habitable compartments for radiation risk assessment].

A geometric model of the International space station (ISS) service module has been built up with account of basic structural components and spatial heterogeneity of matter distribution in SM equipment for the purpose of evaluating influence of a selected matter distribution function on the R-16 absorbed dose estimation. The uniform matter distribution function was shown to give the absorbed dose upper bound. Correspondingly, equipment representation as a homogeneous average density matter gives the absorbed dose lower bound. The best results were achieved using the normal law (Gauss law) for the matter distribution function. Shielding functions for DB-8 detectors (new radiation monitoring system elements) are presented.

Humans↗

Characteristics of biofilm formation by Candida albicans.

A variety of manifestations of Candida albicans infections are associated with the formation of biofilms on the surface of biomaterials. Cells in biofilms display phenotypic traits that are dramatically different from their free-floating planktonic counterparts, such as increased resistance to anti-microbial agents and protection form host defenses. Here, we describe the characteristics of C. albicans biofilm development using a 96 well microtitre plate model, microscopic observations and a colorimetric method based on the use of a modified tetrazolium salt (2,3-bis(2-methoxy-4-nitro-5-sulfo-phenyl)-2H-tetrazolium-5-carboxanilide, XTT) to monitor metabolic activities of cells within the biofilm. C. albicans biofilm formation was characterized by initial adherence of yeast cells (0-2 h), followed by germination and micro-colony formation (2-4 h), filamentation (4-6 h), monolayer development (6-8 h), proliferation (8-24 h) and maturation (24-48 h). The XTT-reduction assay showed a linear relationship between cellular density of the biofilm and metabolic activity. Serum and saliva pre-conditioning films increased the initial attachment of C. albicans, but had minimal effect on subsequent biofilm formation. Scanning electron microscopy and confocal scanning laser microscopy were used to visualize C. albicans biofilms. Mature C. albicans biofilms consisted of a dense network of yeasts cells and hyphal elements embedded within exopolymeric material. C. albicans biofilms displayed a complex three dimensional structure which demonstrated spatial heterogeneity and a typical architecture showing microcolonies with ramifying water channels. Antifungal susceptibility testing demonstrated the increased resistance of sessile C. albicans cells against clinically used fluconazole and amphotericin B as compared to their planktonic counterparts.

Journal Article↗

Preliminary studies on the prevalence and distribution of urinary schistosomiasis in Ondo State, Nigeria.

The prevalence of S. haematobium infection in 18 Local Government Area (LGA) in Ondo state was determined by examining pupils from randomly selected schools in the state. A total of 4266 urine samples were examined and 1303 (30.5%) were infected with the parasite. The infection was recorded in both rural and urban communities in each LGA. The overall prevalence was significantly higher in males (33.7%) than in females (26.0%) (P = -0.001). The LGA exhibiting the highest overall prevalence of infection was Akure north (86.2%; Cl, 0.82-0.9). The infection was most common in subjects between the ages of 11 and 15 years. Seven species of aquatic snails were encountered and B. (P). globosus was the most abundant and widespread species. The Owena river/dam in Idanre LGA was richest in molluscan fauna. B. (P). globosus and Biomphalaria pfeifferi shedding cercariae were recovered from Owena river and dam. The study shows that there were spatial heterogeneities in the prevalence of infections in both human population and the snail intermediate hosts. The implications of the clustering nature of the disease, for a successful control program in the state, were discussed.

Adolescent↗

Externally placed vs intravaginally positioned radio frequency coils for quantitative spin-spin relaxometry of ovarian follicular fluid.

OBJECTIVE: To evaluate different imaging protocols, especially with respect to radio frequency (RF) receiver coil location, for their suitability in providing least squares derived quantitative T2 values of ovarian follicular fluid for investigations of basic ovarian physiology. METHODS: The ovaries of 10 women were imaged via magnetic resonance imaging (MRI) using externally positioned and intravaginally placed RF receiver coils. Half-Fourier acquisition with single-shot turbo spin-echo (HASTE), multiple-echo T2, Dixon, turbo spin-echo, and 3-dimensional (3D) fast imaging with steady-state precession (FISP) and time-reversed FISP (PSIF) sequences were used. Quantitative T2 nuclear spin relaxation rate information from the ovarian follicles between data acquired with the external and intravaginal coils were compared. Additionally, the amount of ovarian follicle and corpora lutea structural detail visible was qualitatively assessed. RESULTS: The T2 computations indicated that there was no difference in the follicular fluid T2 values or in the heterogeneity (spatial variance) of the T2 values between data acquired with the external RF coil and data acquired with the intravaginal RF coil. The best sequences for the visualization of ovarian internal structure were the 3D PSIF sequences and the multiple-echo T2-weighted images, confirming our earlier imaging work on excised cow ovaries. CONCLUSION: It is best to use an externally placed RF coil for quantitative MRI study of ovarian physiology given the lack of difference in quantitative T2 information and the difficulty associated with imaging the ovaries using an intravaginal RF probe.

Adult↗

[Maintaining mechanism of species diversity of land plant communities].

The maintaining mechanism of species diversity of land plant communities is a key and advancing edge in biodiversity study. Botanists and ecologists have presented many hypotheses and theories with controversies, and no general theory system was available. In this paper, the problem was reviewed mainly on two scales. The first was big spatial scale, aiming at the physical and natural factors that affect the species diversity, including histories and ages of plant communities, gradient changes such as latitude gradient, water gradient, altitude gradient and soil nutrients gradient, area effect, and isolation; and the second was concentrated on a special plant community, and mainly discussed the relationships of biodiversity with biotic factors (primary productivity, relationship between species, and gap dynamics) and abiotic factors (succession, disturbance and spatial heterogeneity, and human activity).

Biodiversity↗

Between-group transmission dynamics of the swallow bug, Oeciacus vicarius.

The parasitic cimicid swallow bug, Oeciacus vicarius, is the principal invertebrate vector for Buggy Creek virus (BCRV) and has also been associated with Venezuelan equine encephalitis virus. To help understand the spread of this vector, we experimentally measured the transmission of O. vicarius between groups (colonies) of its main host, the cliff swallow (Petrochelidonpyrrhonota), in the field. Transmission of bugs between colonies varied significantly with year, size of the colony, and week within the season. Bug immigration into sites tended to peak in mid-summer. Swallow nests in larger colonies had more consistent rates of bug introduction than did nests in small colonies, but within a colony a given nest's weekly immigrant-bug count varied widely across the season. Transmission of O. vicarius between host social groups follows broadly predictable seasonal patterns, but there is nevertheless temporal and spatial heterogeneity in bug transmission. By understanding how long-distance movement by this vector varies in time and space, we can better predict where and when BCRV epizootics may occur.

Alphavirus↗

Organization of cortical cytoskeleton of cultured chromaffin cells and involvement in secretion as revealed by quick-freeze, deep-etching, and double-label immunoelectron microscopy.

We have studied the organization of the cytoskeleton in both unstimulated and stimulated cultured chromaffin cells, as well as its relationship with their secretory process by exocytosis. We found the spatial heterogeneity in the intensity of cortical rhodamine-phalloidin staining within a cell. The overall staining pattern or intensity was minimally altered after stimulation, although dopamine-beta-hydroxylase (DBH) antigen, a marker for the chromaffin granule membrane, was exposed preferentially on the plasma membrane areas with lower intensity of rhodamine-phalloidin staining. Using the quick-freeze, deep-etch technique, we found the heterogeneity in the organization of cortical cytoskeletal networks--some regions have actin filament bundles running parallel to the plasma membrane interspersed between granules and the plasma membrane, while others have few actin filaments beneath the plasma membrane before stimulation. Actin filaments were rarely observed in the inner cytoplasm. We did not observe the overall change in its organization after stimulation. Double-label immunogold EM using anti-DBH antibody and anti-actin antibody combined with statistical analysis showed that (1) DBH was exposed on the plasma membrane preferentially where actin was sparse after stimulation (significant at less than 0.1%), although (2) regions having sparse actin were not always the sites for DBH exposure, and (3) the cortical actin zone was sometimes disrupted at the DBH-exposed sites after stimulation. The present data suggested that (1) secretion is related to heterogeneous organization of cortical cytoskeleton after stimulation and (2) massive synchronized reorganization of the cytoskeleton in the whole cell is not necessary for secretion, although small changes of the cytoskeleton might occur under local regulation at each exocytotic site at the moment of the release.

Actins↗

Capillo-venous flow in the brain: significance of intravascular RBC aggregation for venous flow regulation.

Despite numerous reports on the regulation of cerebral arterial blood flow, little work has been done on that of the capillary and venous system. We have examined capillo-venous blood flow in the rat intraparenchymal cerebral cortex, employing a high-speed video confocal fluorescence microscope and our own software (KEIOIS-2) to track individual RBCs and to document velocity changes in single capillaries and veins. We found temporal and spatial heterogeneous changes in capillary RBC density (hematocrit), RBC recruitment, oscillation of capillary flow or vasomotion, and capillary density unrelated to arteriolar diametric changes. In veins, blood flow was also quite variable in time and space, and at a high frame rate venous blood per se was observed as a moving column of amorphous RBC aggregates with irregular edges; we believe this is the first report of such an observation under physiological conditions. The formation of such intravascular RBC aggregates would enforce slowing of blood flow and vice versa: RBC aggregation was in turn entirely flow-dependent. In rapid venous flow, RBCs appeared as a straight gathering of individually separated and dispersed cells. At capillo-venous junctions, an "RBC pouring" process appeared to occur, with RBCs either being sucked up from the capillary, merging, or being held back in the capillary. Changes in venous blood viscosity due to RBC aggregation are likely to be involved in this process. These findings suggest that the capillo-venous junction somehow participates in the regulation of appropriate tissue capillary flow in toto.

Animals↗

[A conceptual model of the dynamics of the Syamozero lake community].

We have developed a conceptual mathematical model of the dynamics of a spatially heterogeneous population system, the prototype of which is the Syamozero lake fish community. Based on the analysis of solutions of the model, we show that interrelations between prey and predator populations in two neighboring habitats (pelagic and offshore zones) can lead to both undamped oscillations and stationary values of the population size. The population density was found to be close to the values oblained in the course of long-term observations of the biota of the Syamozero lake. Besides, we showed that the transition to the stationary states can be accompanied by long-term (dozens and hundreds of years) damped oscillations of the prey and predator population size. In natural waters, long-term transition periods can prevent the attainment of stationary regimes of fish community functioning.

Animals↗

[Avian diversity in Wuhu City in summer and winter].

From May 2004 to February 2005, an investigation was made on the avian communities in four typical habitats, i.e., village and farmland, urban woodlot, floodplain, and riverine wetland in Wuhu City, with the related diversity indices analyzed. A total of 117 species belonging to 15 orders and 31 families was recorded. The avian species and G-F index in village and farmland, urban woodlot, and floodplain were higher in summer than in winter, while the species number, Shannon-Wiener index and Pielou index in riverine wetland were significantly higher in winter than in summer. The avian species and G-F index in urban woodlot were the highest, and the Shannon-Wiener index and Pielou index in floodplain were higher than those in other three habitats. The highest density was observed in village and farmland in summer and in urban woodlot in winter, being 31.1140 and 42.9160 ind x hm(-2), respectively. The avian species, density, Shannon-Wiener index and G-F index in riverine wetland were the lowest. Avian diversity could be enhanced by increasing spatial heterogeneity and reducing human disturbance.

Animals↗

[Soil properties under shrubs in arid area of oasis-desert transition belt].

In arid and semi-arid areas with sparse vegetation cover, the spatial pattern of surface soil had a definite effect on soil salinity and nutrient flow, which is of highly importance for understanding the processes of land cover change. In this paper, a total of 3 shrub types and 2 soil sampling depths (0-20 and 20-40 cm) in the arid area of oasis-desert transition belt were selected to assess the spatial heterogeneity of soil resources under shrubs. The results showed that different types of shrub had no significant effect on the particle size distribution of soil which was mainly composed of sand and silt, but significant cluster effect was observed under Tamarix ramosissima + bare land shrub. Soils under shrub canopy had significantly higher contents of organic matter, total N and available K, compared to those in open spaces, and presented obvious "fertile island" phenomenon. Shrub types had significant effects on soil salinity, and different cluster effect existed in soils under different shrubs. The heterogeneity of soil resources resulted from a large number of factors, including climate, soil environment, height and extent of shrub canopy, stemflow, existance of other ground cover plants, and so on, many of which were mutually interactive.

Desert Climate↗