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PubMed2006

An ecotoxicological approach to assessing the impact of tanning industry effluent on river health.

A study was conducted to investigate the sediment health and water quality of the River Sagana, Kenya, as impacted by the local tanning industry. Chemical analysis identified the main chemical pollutants (pentachlorophenols and chromium) while a bioassay addressed pollutant bioavailability. The bioassay, exploiting the luminescence response of a lux marked bacterial biosensor, was coupled to a dehydrogenase and Dapnia magna test to determine toxicity effects on sediments. Results highlighted the toxicity of the tannery effluent to the sediments at the point of discharge (64% of control bioluminescence) with gradual improvement downstream. There was a significant increase in dehydrogenase downstream, with the enzyme activity attaining a peak at 600 m, also indicating a gradual reduction of toxicity. Biological oxygen demand (19.56 mg L(-1)) dissolved oxygen (3.97 mg L(-1)) and high lethal dose value (85%) of D. magna also confirmed an initial stress at the point of discharge and recovery downstream. Optical density of surface water demonstrated an increase in suspended particulates and colour after the discharge point, eventually decreasing beyond 400 m. In conclusion, the study highlighted the importance of understanding the biogeochemistry of river systems impacted by industries discharging effluent into them and the invaluable role of a biosensor-based ecotoxicological approach to address effluent hazards, particularly in relation to river sediments.

Animals↗

PubMed2005

Bacterial community composition in different sediments from the Eastern Mediterranean Sea: a comparison of four 16S ribosomal DNA clone libraries.

The regional variability of sediment bacterial community composition and diversity was studied by comparative analysis of four large 16S ribosomal DNA (rDNA) clone libraries from sediments in different regions of the Eastern Mediterranean Sea (Thermaikos Gulf, Cretan Sea, and South lonian Sea). Amplified rDNA restriction analysis of 664 clones from the libraries indicate that the rDNA richness and evenness was high: for example, a near-1:1 relationship among screened clones and number of unique restriction patterns when up to 190 clones were screened for each library. Phylogenetic analysis of 207 bacterial 16S rDNA sequences from the sediment libraries demonstrated that Gamma-, Delta-, and Alphaproteobacteria, Holophaga/Acidobacteria, Planctomycetales, Actinobacteria, Bacteroidetes, and Verrucomicrobia were represented in all four libraries. A few clones also grouped with the Betaproteobacteria, Nitrospirae, Spirochaetales, Chlamydiae, Firmicutes, and candidate division OPl 1. The abundance of sequences affiliated with Gammaproteobacteria was higher in libraries from shallow sediments in the Thermaikos Gulf (30 m) and the Cretan Sea (100 m) compared to the deeper South Ionian station (2790 m). Most sequences in the four sediment libraries clustered with uncultured 16S rDNA phylotypes from marine habitats, and many of the closest matches were clones from hydrocarbon seeps, benzene-mineralizing consortia, sulfate reducers, sulk oxidizers, and ammonia oxidizers. LIBSHUFF statistics of 16S rDNA gene sequences from the four libraries revealed major differences, indicating either a very high richness in the sediment bacterial communities or considerable variability in bacterial community composition among regions, or both.

Bacteria↗

PubMed2006

Biodegradation of hexahydro-1,3,5-trinitro-1,3,5-triazine by novel fungi isolated from unexploded ordnance contaminated marine sediment.

Undersea deposition of unexploded ordnance (UXO) constitutes a potential source of contamination of marine environments by hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) and octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocine (HMX). Using sediment from a coastal UXO field, Oahu Island, Hawaii, we isolated four novel aerobic RDX-degrading fungi HAW-OCF1, HAW-OCF2, HAW-OCF3 and HAW-OCF5, tentatively identified as members of Rhodotorula, Bullera, Acremonium and Penicillium, respectively. The four isolates mineralized 15-34% of RDX in 58 days as determined by liberated 14CO2. Subsequently we selected Acremonium to determine biotransformation pathway(s) of RDX in more details. When RDX (100 microM) was incubated with resting cells of Acremonium we detected methylenedinitramine (MEDINA), N2O and HCHO. Also we detected hexahydro-1-nitroso-3,5-dinitro-1,3,5-triazine (MNX) together with trace amounts of hexahydro-1,3-dinitroso-5-nitro-1,3,5-triazine (DNX) and hexahydro-1,3,5-trinitroso-1,3,5-triazine (TNX). Under the same conditions MNX produced N2O and HCHO together with trace amounts of DNX and TNX, but we were unable to detect MEDINA. TNX did not degrade with Acremonium. These experimental findings suggested that RDX degraded via at least two major initial routes; one route involved direct ring cleavage to MEDINA and another involved reduction to MNX prior to ring cleavage. Nitrite was only detected in trace amounts suggesting that degradation via initial denitration did take place but not significantly. Aerobic incubation of Acremonium in sediment contaminated with RDX led to enhanced removal of the nitramine.

Biodegradation, Environmental↗

PubMed2006

Determination and assessment of HCHs and DDTs residues in sediments from Lake Dongting, China.

The contamination of organochlorine pesticides hexachlorocyclohexane (HCH) and Dichlorodiphenyltrichloroethane (DDT) and their eco-environmental assessment in surface sediments from Lake Dongting, the second-largest freshwater lake in China, were studied. Concentrations of summation HCH (=alpha-HCH + beta-HCH + gamma-HCH +delta-HCH) were 0.21-9.59 ng/g dry weight and those of summation DDT = p,p'-DDD+p,p'-DDE+o,p'-DDT+p,p'-DDT) ranged from under detectable limit to 10.15 ng/g dry weight. The ratios of alpha-HCH to gamma-HCH were above 7 at most sampling sites while no or a small amount of beta-HCH were found at all sites, suggesting the degradation of HCH used in the history and possibly current use of HCH in the region. The low ratios (below 2.0 in most cases) of (p,p'-DDE+p,p'-DDD) to p,p'-DDT and high levels of individual isomers of DDT at some sites also suggested that there have still been fresh inputs of DDT into Lake Dongting. Through the comparison between concentrations of HCH and DDT residues in sediments of Lake Dongting and those from other places in China and also from the results of our eco-environmental assessment, it can be concluded that Lake Dongting is the water body with high contamination of both HCH and DDT in its sediments in comparison with other water bodies in China.

China↗

PubMed1983

Biomass measurement of methane forming bacteria in environmental samples.

Methane-forming bacteria contain unusual phytanylglycerol ether phospholipids which can be extracted from the bacteria in sediments and assayed quantitatively by high performance liquid chromatography (HPLC). In this procedure the lipids were extracted, the phospholipids recovered, hydrolyzed, purified by thin layer chromatography, derivatized and assayed by HPLC. Ether lipids were recovered quantitatively from Methanobacterium thermoautotrophicum and sediments at levels as low as 8 x 10(-14) moles. In freshwater and marine sediments the flux of methane to the atmosphere and the methane levels in the pore water reflects the recovery of the phytanyl glycerol ether lipid 'signature'. The proportion of the ether phospholipid to the total recoverable phospholipid was highest in anaerobic digester sewage sludge and deeper subsurface freshwater sediment horizons.

Biomass↗

PubMed2005

Organochlorine pesticides, polychlorinated biphenyls and polybrominated diphenyl ethers in Singapore's coastal marine sediments.

Persistent organic pollutants (POPs) are ubiquitous pollutants in the marine environment, particular in coastal areas affected by industry and shipping traffic. POPs are known for their recalcitrance and toxicity in the environment, and there is increasing concern over their global distribution and impact upon wildlife. Marine surface sediment samples taken within 6 km of the coastline of Singapore were analyzed to determine prevailing concentrations of organochlorine pesticides (OCPs), polychlorinated biphenyl (PCBs) and polybrominated diphenyl ethers (PBDEs). Total PCB concentrations varied widely from 1.4 to 329.6 ng/g (average 73.9 ng/g), where high concentrations were detected at sample locations closest to industrial areas with intensive shipping traffic. Total DDT concentrations ranged from 2.2 to 11.9 ng/g (average 6.7 ng/g) and were lower than the concentration range of 3.3-46.2 ng/g measured for total HCH (average 18.1 ng/g). Ratios of DDT/(DDE+DDD) in sediments do not indicate recent inputs of DDT into Singapore's marine environment, but high concentrations of alpha-HCH and gamma-HCH show evidence for the usage of HCHs in Southeast Asia. Peak concentrations of cis- and trans-Chlordane were 10 ng/g. Among the PBDE congeners BDE 47, 99, and 100 only BDE 47 could be detected at a range of 3.4-13.8 ng/g (average 6.2 ng/g). The levels of OCPs, PCBs and PBDEs were compared to available data for other countries in Asia, and indicated relatively moderate levels of contamination. Peak concentrations of PCBs, HCH isomers, Chlordane, Heptachlor, Heptachlor epoxide and Dieldrin have the potential to induce ecotoxicological impacts based on levels specified in the sediment quality standards of the USEPA and Canadian Council of Ministers of the Environment.

Environmental Monitoring↗

PubMed2006

Simultaneous determination of endocrine-disrupting phenols and steroid estrogens in sediment by gas chromatography-mass spectrometry.

A simple and effective method has been developed to simultaneously determine endocrine-disrupting phenolic xenoestrogens and steroid estrogens in sediment by using ultra-sonicated extraction in combination with silica gel fractionation, derivatization with pentafluropropionic anhydride, and gas chromatography-mass spectrometry (GC-MS) in selected ion monitoring mode (SIM). Satisfactory recoveries have been obtained for phenolic xenoestrogens and steroid estrogens. The method enables the determination of targets at concentrations of lower nanogram-per-gram in sediments. The method has been successfully applied to the sediments collected from Pearl River Estuary (PRE), South China Sea, China. Nonylphenol and bisphenol-A (BPA) were detected in the range from 204.2 to 664.5 ng/g and 0.6 to 4.0 ng/g, respectively. None of the estrogens were found in the sediment samples.

Benzhydryl Compounds↗

PubMed2005

Toxicity and bioavailability of atrazine and molinate to the freshwater shrimp (Paratya australiensis) under laboratory and simulated field conditions.

Acute (96-h) semistatic toxicity tests were conducted by exposing the freshwater shrimp, Paratya australiensis, to atrazine and molinate in laboratory water and in river water both with and without sediment. The median lethal concentrations (LC50) and 95% fiducial limits of atrazine for P. australiensis in laboratory water in the absence and presence of sediment were 9.9 (8.6-11.5) and 6.8 (5.4-8.5)mg/L, respectively, while the corresponding values in river water were 9.8 (8.5-11.2) and 6.5 (5.4-7.8)mg/L, respectively. For molinate, the LC50 values in laboratory water in the absence and presence of sediment were 9.2 (7.0-12.1) and 9.0 (6.8-12.0)mg/L, respectively and the corresponding values in river water were 8.7 (6.4-11.8) and 8.2 (6.6-10.2)mg/L, respectively. Neither the river water nor the presence of sediment significantly (P<0.05) reduced the bioavailability of either chemical to P. australiensis. This was unexpected, as studies with other aquatic organisms have shown that sediment significantly reduced the bioavailability of these chemicals.

Animals↗

PubMed2006

Liquid versus solid phase bioassays for dredged material toxicity assessment.

Since 1994 the results of the analyses of key chemical compounds (trace metals, polychlorinated biphenyls and polycyclic aromatic hydrocarbons) and the comparison with the corresponding sediment quality guidelines (SQGs) are used in decision-making for dredged material management in Spain. Nonetheless in the last decades a tiered testing approach is promoted for assessing the physical and chemical characteristics of dredged sediments and their potential biological effects in the environment. Bioassays have been used for sediment toxicity assessment in Spain but few or no experiences are reported on harbour sediments. We studied the incidence of toxicity in the 7 d bioassay using rotifers (Brachionus plicatilis) and the 48 h bioassay using sea urchin (Paracentrotus lividus) embryos over a series of experiments employing 22 different elutriates. The relative performance of this exposure phase was not comparable to data on the 10-d acute toxicity test using the burrowing amphipod Corophium volutator and the polychaete Arenicola marina, carried out on the whole sediments. These results evidence the importance of the exposure route and the test selected in decision-making, as the toxicity registered for the undiluted elutriates was largely due to the different solubility of sediment-bound contaminants. This work and other studies indicate that for many sediments, a complete battery of test is recommended together with physico-chemical analyses to decide whether dredged sediments are suitable for open water disposal or not.

Animals↗

PubMedDate not supplied

Metal uptake in zebrafish embryo-larvae exposed to metal-contaminated sediments.

Heavy metal contamination in coastal and estuarine regions of inner Tolo Harbour, as well as some river and nullah areas, is one of the major water-pollution issues in Hong Kong. Zebrafish (Danio rerio) embryo-larvae was used to study metal uptake from coastal sediments collected from Fo Tan River (industrial area, Sha Tin), Tai Po River (residential area, Tai Po) and Wu Kai Sa (rural area, Tolo Harbour). Exposure experiments (7-days) were carried out using different concentrations (0.1%, 0.5%, 1% and 0% as control) of sediments that were added to aquaria containing fertilized zebrafish eggs until they hatched to become larvae. Uptake of heavy metals (Cd, Cu, Pb and Zn) was determined in whole embryo-larvae following exposure. Significant levels of Cd, Cu, Pb and Zn were detected in the embryo-larvae exposed to sediments from Tai Po River. However, significant levels of only Cd and Cu were found in embryo-larvae exposed to sediments from Fo Tan River.

Animals↗

PubMed2004

Inhomogeneous distribution of polycyclic aromatic hydrocarbons in different size and density fractions of contaminated sediment from Auckland Harbour, New Zealand: an opportunity for mitigation.

Polycyclic aromatic hydrocarbons (PAHs) in sediment from Auckland Harbour (New Zealand) are not distributed evenly throughout bulk sediment, but highly concentrated in coarser, low-density fractions. Concentrations of 24 PAHs, measured in sediment that was separated into six size fractions that were furthermore separated into two density sub-fractions by flotation in sodium-polytungstate solution (rho = 2.15 g cm(-3)), varied between 4-103 microg g(-1)dw among grain size fractions and 2-998 microg g(-1)dw for density sub-fractions. Highest PAH concentrations were measured in the low density, 125-250 microm fraction. All sediment fractions had a similar relative PAH composition, dominated by >3-ring PAHs, suggesting a common pyrogenic origin. Low density material had 10-200 times higher PAH concentrations and 10-100 times higher organic carbon (OC) content, yet differences in OC content only partially accounted for variations in PAH concentration. Low density particles contributed more than 75% of the Sigma PAH, while comprising only 3% of bulk sediment dry weight. This may have significant utility for contaminant mitigation efforts in Auckland Harbour.

Environmental Monitoring↗

PubMed2004

The distribution and inventory of total and methyl mercury in Kuwait Bay.

Sediment (surface and core) sampling was conducted during the period from August 96-December 98 from intertidal and offshore areas in Kuwait Bay. The highest (and most variable) concentrations of total mercury (T-Hg; 36500+/-34930 ng g(-1)) are encountered around the previous industrial outfall where sediments are disturbed by shipping activities. The concentrations of T-Hg are lower in the Shuwaikh Port area (650+/-210 ng g(-1)) and continue to decrease towards the northern coastline of Kuwait Bay (average concentrations in the wider Bay region are 50+/-30 ng g(-1)). These values are still above background concentrations of 15-20 ng g(-1). Calculation of the total inventory of mercury in all the surface sediments of the studied area indicates that approximately 22.5 ton is present which is similar to the estimated industrial discharges of approximately 20 ton suggesting that the contamination is largely confined to the Bay and that releases to the wider Gulf region are small. The distributions of MeHg are similar to those of T-Hg and represent ranges between 0.23% and 0.5% of the T-Hg indicating that surface sediments within Kuwait Bay contain approximately 80 kg of this chemical.

Environmental Monitoring↗

PubMed2004

The mutagenic hazards of aquatic sediments: a review.

Sediments are the sink for particle-sorbed contaminants in aquatic systems and can serve as a reservoir of toxic contaminants that continually threaten the health and viability of aquatic biota. This work is a comprehensive review of published studies that investigated the genotoxicity of sediments in rivers, lakes and marine habitats. The Salmonella mutagenicity test is the most frequently used assay and accounts for 41.1% of the available data. The Salmonella data revealed mutagenic potency values for sediment extracts (in revertants per gram dry weight) that spans over seven orders of magnitude from not detectable to highly potent (10(5) rev/g). Analyses of the Salmonella data (n=510) showed significant differences between rural, urban/industrial, and heavily contaminated (e.g., dump) sites assessed using TA98 and TA100 with S9 activation. Additional analyses showed a significant positive correlation between Salmonella mutagenic potency (TA98 and TA100 with S9) and PAH contamination (r2=0.19-0.68). The second and third most commonly used assays for the analysis of sediments and sediment extracts are the SOS Chromotest (9.2%) and the Mutatox assays (7.8%), respectively. These assays are frequently used for rapid initial screening of collected samples. A variety of other in vitro endpoints employing cultured fish and mammalian cells have been used to investigate sediment genotoxic activity. Endpoints investigated include sister chromatid exchange frequency, micronucleus frequency, chromosome aberration frequency, gene mutation at tk and hprt loci, unscheduled DNA synthesis, DNA adduct frequency, and DNA strand break frequency. More complex in vivo assays have documented a wide range of effects including neoplasms and preneoplastic lesions in fish and invertebrate exposed ex situ. Although costly and time consuming, these assays have provided definitive evidence linking sediment contamination and a variety of genotoxic and carcinogenic effects observed in situ.

Carcinogens↗

PubMed2005

Kinetics of phosphorus release from a natural mixed grain-size sediment with associated algal biofilms.

Experiments using flumes containing mixed grain-size sediment with an associated algal biofilm, from two sites on the R. Tame, investigated the sediment-water exchanges in heterogeneous sediment deposits. These results were considered in the light of findings of a companion study [Gainswin BE, et al. The effects of sediment size fraction and associated algal biofilms on the kinetics of phosphorus release. Sci Total Environ, this issue.] by considering this natural system in relation to the effects of the different sizes of material comprising the sediment. Sediment samples were collected in trays installed in the river over a period of one growth cycle (March 2001-April 2002) and placed in flume channels with controlled water flow. The temperature, pH, and dissolved oxygen of the solution overlying the sediment were monitored automatically whilst filtered samples were obtained at 2-0h intervals over 48 h. The biomass, expressed as chlorophyll a, of the algal component of the biofilm from the surface of the sediment was estimated using methanol extraction. The composition of the sediment, viz. size fractions, organic matter and porosity, were determined at the end of the experiments. The equilibrium phosphate concentration and a phosphorus transfer index were used to establish that a net uptake of phosphorus by some of the samples that occurred at the time of sampling. The results were modelled using a Diffusion Boundary Layer model and the maximum flux from the sediment (or limiting diffusion flux) compared for each of the samples. The limiting diffusion flux was highest at the most contaminated site--reaching approximately 180 nmol m(-2) s(-1) (normalised with respect to the river bed area). The limiting diffusion flux calculated for the composite samples was in agreement with the flux estimated from the contributions expected from the individual size fractions [Gainswin BE, et al. The effects of sediment size fraction and associated algal biofilms on the kinetics of phosphorus release. Sci Total Environ, this issue.]. The dominance of the flux contribution from the stones size fraction (>20 mm) confirms that sediment having a filamentous biofilm and associated particulate material results in a greater flux than a silt sediment without such a biomass.

Biofilms↗

PubMed2002

Modelling of hydrodynamics and cohesive sediment transport in Tanshui River estuarine system, Taiwan.

A laterally averaged two-dimensional numerical model is used to simulate hydrodynamics and cohesive sediment transport in the Tanshui River estuarine system. The model handles tributaries as well as the main stem of the estuarine system. Observed time series of salinity data and tidally averaged salinity distributions have been compared with model results to calibrate the turbulent diffusion coefficients. The overall model verification is achieved with comparisons of residual currents and salinity distribution. The model reproduces the prototype water surface elevation, currents and salinity distributions. Comparisons of the suspended cohesive sediment concentrations calculated by the numerical model and the field data at various stations show good agreement. The validated model is applied to investigate the tidally averaged salinity distributions, residual circulation and suspended sediment concentration under low flow conditions in the Tanshui River estuarine system. The model results show that the limit of salt intrusion in the mainstem estuary is located at Hsin-Hai bridge in Tahan Stream, 26 km from the River mouth under Q75 flow. The null point is located at the head of salt intrusion, using 1 ppt isohaline as an indicator. The tidally averaged sediment concentration distribution exhibits a local maximum around the null point.

Calibration↗

PubMed2002

Methane emissions from a coastal lagoon: Vembanad Lake, West Coast, India.

An attempt has been made to estimate methane fluxes from a tropical coastal wetland the Vembanad Lake, a lagoon along the West Coast of India. It has been found that Vembanad Lake contributes significant amount of methane to the atmosphere. Average emissions varied spatially within the lake. Methane emissions were 193.2 +/- 24.5 mg m(-2) h(-1) at Kumaragam (fresh water) as compared to 9.3 +/- 9.6 mgm(-2) h(-1) at Pullot (brackish water) site. Seasonal variation was significant between pre- and post-monsoons. Soil temperature, time of the day, salinity sediment organic carbon, all control the rate of methane emissions from the Vembanad Lake.

Ecosystem↗

PubMed2002

Environmental assessment of polycyclic aromatic hydrocarbons (PAHs) in surface sediments of the Santander Bay, Northern Spain.

Samples of intertidal surface sediments (0-2 cm) were collected in 17 stations of the Santander Bay, Cantabric Sea, Northern Spain. The concentrations of polycyclic aromatic hydrocarbons (PAHs), 16, were analysed by HPLC and MS detection. Surface sediments show a good linear correlation among the parameters of the experimental organic matter evaluation, where total carbon (TC) and loss on ignition (LOI) are approximately 2.5 and 5 times total organic carbon (TOC). A wide range of TOC from 0.08% to 4.1%, and a broad distribution of the sum of sigma16PAHs, from 0.02 to 344.6 microg/g d.w., which can be correlated by an exponential equation to the TOC, has been identified. A qualitative relationship may be established between the industrial input along the rivers and the concentration of sigma6PAHs in the sediments of the estuaries: Boo estuary (8404-4631 microg/g OC), Solia-San Salvador estuaries (305-113 microg/g OC) and Cubas estuary (31-32 microg/g OC). This work shows a dramatic change in the spatial distribution in the concentration of PAHs of intertidal surface sediments. The left edge of the Bay has the main traffic around the city and the major source of PAHs is from combustion processes and estuarine inputs, leading to medium values of PAHs in the sediments; the right edge of the Bay has much lesser anthropogenic activities leading to lower values of PAHs in sediments. The distribution of individual PAHs in sediments varies widely depending on their structure and molecular weight; the 4-6 ring aromatics predominate in polluted sediments due to their higher persistence. The isomer ratio does not allow any clear identification of the PAHs origin. Environmental evaluation according to Dutch guidelines and consensus sediment quality guidelines based on ecotoxicological data leads to the same conclusion, sediments in the Santander Bay show a very different environmental quality depending on the spatial position from heavily polluted/medium effects to non-polluted/below threshold effects. These results indicate that local sources of PAHs, especially estuary discharges, lead to very different qualities of sediments in coastal zones, where traffic and industrial activities take place.

Chromatography, High Pressure Liquid↗

PubMed2002

Distribution coefficients (Kd) and desorption rates of 137Cs and 241Am in Black Sea sediments.

The distribution coefficients (Kd) and desorption rates of 137Cs and 241Am radionuclides in bottom sediments at different locations in the Black Sea were studied under laboratory conditions. The Kd values were found to be 500 for 137Cs and 3800 for 241Am at the steady state and described exponential curves. Rapid uptake of the radionuclides occurred during the initial period and little accumulation happened after four days. The desorption rates for 137Cs in different bottom sediments were best described by a three-component exponential model. The desorption half-times of 137Cs ranged from 26 to 50 d at the slow components. However, the desorption rate of 241Am described one component for all sediment samples and desorption half-time was found to be 75 d. In general, the results showed that the 241Am radionuclide is more effectively transferred to bottom sediment and has longer turnover time than 137Cs under Black Sea conditions.

Adsorption↗