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PubMed1996

Reactions of Charged Substrates. 5. The Solvolysis and Sodium Azide Substitution Reactions of Benzylpyridinium Ions in Deuterium Oxide.

Second-order rate constants and activation values were measured for the reactions with NaN(3) of a series of 4-Y-substituted (Y = MeO, Me, H, Cl, and NO(2)) benzyl 3'-Z-substituted (Z = CN, CONH(2), H, F, Ac) pyridinium chlorides in deuterium oxide. 3'-Cyanopyridine substrates reacted much faster than nicotinamide and pyridine substrates; in the pyridine series the 4-Me, 4-H, and 4-Cl benzyl analogs did not react for up to 6 months at 96()() degrees C in 1.7 M NaN(3). The 3'-cyanopyridine substrates do not exhibit borderline kinetic behavior, but the nicotinamide substrates do. The Hammett plot is flat for the NaN(3) reaction of 3'-cyanopyridine substrates and increasingly V-shaped for the nicotinamide and pyridine substrates. The values of beta(LG) (four-point plot) for the NaN(3) reaction of the 4-MeO benzyl substrates is -1.45, which is usually interpreted as being a very "late" activated complex. Two-point Brønsted "plots" for the other benzyl derivatives and for two N-methylpyridinium ions give values of beta(LG) in the same range. The second-order rate constant and activation values for N-methyl-3'-cyanopyridinium iodide are within the same range as those for the benzyl substrates. For the hydrolysis reaction, the Hammett plot is linear for 3'-cyanopyridine substrates (rho(+) = -1.24) and flat for the nicotinamide substrates. The extent of hydrolysis of 0.005-0.05 M solutions of the 3'-cyanopyridinie substrates depended on the initial concentration of substrate, and hydrolysis was slowed significantly or stopped completely in the presence of exogenous 3-cyanopyridine. These results show that an equilibrium is established among the products for the 4-MeO, 4-Me, 4-H, and 4-Cl substrates; the 4-NO(2) substrate reacted too slowly to discern any difference. Data for the extent of hydrolysis were fitted by an equation derived assuming the equilibrium. Despite this limitation on a classic test of mechanism, the rates and rho values are consistent with direct displacement by solvent and not with a unimolecular process. These results, which are rationalized in terms of the Pross-Shaik model, suggest that there are no ion-dipole complex intermediates in the benzyl series and show that borderline kinetic behavior is a function of leaving group ability and is not necessarily related to a change in mechanism. A computational approach was used to evaluate anomalous beta(LG) values for the hydrolysis and nucleophilic substitution reactions of the methypyridinium ion substrates. It was found that neither the Nu-substrate bond lengths nor the difference in charge matched the beta(LG) values. The value of DeltaDeltaS() of -15 gibbs/mol between (4-methoxybenzyl)-3'-cyanopyridinium chloride and the corresponding dimethylsulfonium chloride in the NaN(3) reaction, which is the result of the solvation of the pyridine at the transition state and the lack of solvation of SMe(2), is used to argue that the source of NAD(+) glycohydrolase "catalysis" of NAD(+) bond cleavage is the result of desolvation of the leaving group upon binding.

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PubMed2005

Synthesis of nitrogen-doped carbon nanostructures by the reactions of small molecule carbon halides with sodium azide.

Nitrogen-doped carbon nanostructures including particles, whiskers, square frameworks, lamellar layers, hollow spheres, and tubular structures have been successfully synthesized by designed direct chemical reactions of small molecule carbon halides (such as CCl4, C2Cl6) and nitridation reagent NaN3 in the absence of any templates and catalysts. The N/C ratios of the as-prepared CNx nanostructures (0.01 approximately 0.33) are strongly and systematically related to the reaction temperatures and the choice of carbon sources, as well as the presence or absence of the solvent. The Raman spectra indicate that the approaching graphitization process has occurred as the reaction temperature increases. The possible reaction mechanisms for the formation of the hollow structures are tentatively discussed according to the experimental results. This strategy provides an alternative route to synthesize nitrogen-doped carbon nanostructures and is expected to open up a new route for the synthesis of carbon nitrides.

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PubMed2002

Novel reactions of phosphorus(III) azides and isocyanates: unusual modes of cycloaddition with dipolarophiles and an unexpected case of ring expansion.

New modes of 1,3-dipolar cycloaddition are uncovered by the isolation of [CH2(6-t-Bu-4-Me-C6H2O)2]P(C(CO2Me)C(CO2Me)N[NP(N3)(OC6H2-6-t-Bu-4-Me)2CH2]N) (3) and [CH2(6-t-Bu-4-Me-C6H2O)2]P(C(CO2Me)C(CO2Me)C(O)N) (4) on treating [CH2(6-t-Bu-4-Me-C6H2O)2]P-X [X = N3 (1) and NCO (2)] with the dipolarophile MeO2CC identical to CCO2Me; compound 4 undergoes an unprecedented ring expansion upon addition of 2-(methylamino)ethanol to afford the spirocycle [CH2(6-t-Bu-4-Me-C6H2O)2]P(OCH2CH2N(Me)CH(CO2Me)CH(CO2Me)C(O)N) (5).

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PubMed2005

Molecular and electronic structure of chromium(V) nitrido complexes with azide and isothiocyanate ligands.

The first use of [Cr(N)Cl4]2- as a starting material in chromium(v) nitrido chemistry is demonstrated in simple, high yield, metathesis reactions with the pseudohalogens SCN- and N3- yielding five-coordinate, labile complexes: [Cr(N)(NCS)4]2- and [Cr(N)(N3)4]2-, which have been crystallized and characterized by single-crystal X-ray diffraction. Reaction of [Cr(N)(NCS)4]2- with 1,10-phenanthroline furnishes six-coordinate [Cr(N)(NCS)3(phen)]- wherein phenanthroline coordinates to the position trans to the nitrido ligand. The trans influence of the nitrido ligand leads to a bond length difference of 0.223 A between the axial and equatorial ligators from the phenanthroline ligand. The absorption band with lowest energy in these pseudo-linear complexes is assigned as the electric dipole forbidden transition d(xy) --> d(x-y) based on intensities and its variation with the nature of the equatorial ligators. This absorption provides the spectrochemical series for the equatorial ligands, which is found to be numerically almost identical to that determined for chromium(III). DFT calculations reproduce the observed structures and corroborate the ligand field picture of the electronic structure of these complexes.

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PubMed1978

Depolarization of the Electrogenic Transmembrane Electropotential of Zea mays L. by Bipolaris (Helminthosporium) maydis Race T Toxin, Azide, Cyanide, Dodecyl Succinic Acid, or Cold Temperature.

The transmembrane electrical potential of root cells of Zea mays L. cv. W64A in a modified 1x Higinbotham solution was partially depolarized by semipurified toxin obtained from Bipolaris (Helminthosporium) maydis race T. At a given toxin concentration depolarization of Texas cytoplasm cells was much greater than for normal cytoplasm cells. This observation correlated directly to the differential host susceptibility to the fungus. The time course and magnitude of depolarization were dependent on toxin concentration; at high concentration the electropotential difference change was rapid. Cortex cells depolarized more slowly than epidermal cells indicating that the toxin slowly permeated intercellular regions. Toxin concentrations which affected electropotential difference were of the same magnitude as those required to inhibit root growth, ion uptake, and mitochondrial processes.Azide, cyanide, and cold temperature (5 C) gave the same partial depolarization as did the toxin. Dodecyl succinic acid caused complete depolarization. These and other data indicate that one of the primary actions of the toxin is to inhibit electrogenic ion pumps in the plasmalemma.

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PubMed1986

Seed dormancy in red rice : v. Response to azide, hydroxylamine, and cyanide.

The activity of NaN(3) (0.5 millimolar), hydroxylamine-HCl (10-18 millimolar), and potassium cyanide (1 millimolar) as dormancy-breaking agents of dehulled red rice (Oryza sativa) is pH-dependent such that medium pH values favoring formation of the uncharged chemical species resulted in the highest germination percentages. There was no promotive effect of pH itself in the range of 3 to 10. The minimum contact times for maximum response (>/=90% germination) to NaN(3), KCN, and NH(2)OH-HCl are 8 hours at pH 4, 24 hours at pH 8, and 72 hours at pH 6 or 7, respectively, for exposure commencing at the start of imbibition. Dehulled seeds, imbibed first in water, show only slightly reduced germination when subsequently transferred to solutions of dormancy-breaking chemicals.Intact seeds remain dormant in the presence of NaN(3), KCN, or NH(2)OH-HCl unless partially dry-afterripened. The pH dependence of these chemicals is reduced in intact, afterripening seeds.

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PubMed2002

Comment on mu(1,3)-azido-diazidotetrakis(1,10-phenanthroline)dicopper(II) azide tetrahydrate.

The supramolecular structure of the title dimeric azido complex of copper(II), [Cu(2)(mu(1,3)-N(3))(N(3))(2)(phen)(4)](N(3)) x 4H(2)O (phen is 1,10-phenanthroline, C(12)H(8)N(2)) [Cheng, Hu, Wang & Ye (2002). Acta Cryst. C58, m12-m13], which was originally described in terms of hydrogen-bonded chains, has been re-interpreted as two-dimensional hydrogen-bonded sheets built from R(6)4(12) and R(10)10(28) rings, taking into account the complete hydogen-bonding pattern.

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PubMed2004

Tetraaquabis[5-(4-pyridyl N-oxide)tetrazolato-kappaN(2)]cadmium: the intermediate in the synthesis of a tetrazole from a nitrile and an azide.

The intermediate [Cd(4-PTZ)(2)(H(2)O)(4)] [4-PTZ is 5-(4-pyridyl N-oxide)tetrazolate, C(6)H(4)N(5)O], (I), in the synthesis of 4-HPTZ, (II), from the cycloaddition reaction of 4-cyanopyridine N-oxide with NaN(3) in water using CdCl(2) as catalyst, was structurally characterized. The unique Cd atom lies on a twofold axis and the coordination geometry of the Cd atom is that of a slightly distorted octahedron, involving four water molecules and two tetrazolate ligands. The catalytic role of the Cd(2+) ion in the tetrazole generation reaction stems from the formation of (I). In acidic solution, (I) can be disassociated and the free ligand, (II), can be released.

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