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The spectrum of the calling signals, phonotaxis, and the auditory system in the cricket Gryllus bimaculatus.

In behavioral experiments with a Y labyrinth it was shown that phonotaxis in the female crickets in respect to the calling signals (CS) of the males depends on the spectrum of the signal. The necessary and sufficient condition for development of normal phonotaxis is the preservation of the first, low-frequenct (LF) component of the spectrum (5kHz). Signals with a time pattern identical to that of a CS but with a spectrum containing only the high-frequency (HF) component (12.5 kHz) do not evoke phonotaxis. HF signals in the frequency-range 10-40 kHz evoke negative phonotaxis in females under conditions of "tethered flight". In the auditory system of the crickets, beginning with the tympanal organ, there is a clear separation of the elements effecting LF and HF signals. Two types of ascending interneurons transmitting acoustic information from the primary auditory center to the brain are described in detail. The first is connected primarily with LF receptors and transmits clearly all the time-dependent characteristics of the CS most important for recognition. The second apparently participates in the production of negative phonotaxis. It is connected primarily with HF receptors, has considerable after-effect and also raises sensitivity to sounds of low intensity, emphasizes the initial moment in the effect of a stimulus, and "habituates" rapidly to repeated stimulations.

Adaptation, Physiological↗

PubMed2005

Cluster analysis-based physiological classification and morphological properties of inhibitory neurons in layers 2-3 of monkey dorsolateral prefrontal cortex.

In primates, little is known about intrinsic electrophysiological properties of neocortical neurons and their morphological correlates. To classify inhibitory cells (interneurons) in layers 2-3 of monkey dorsolateral prefrontal cortex we used whole cell voltage recordings and intracellular labeling in slice preparation with subsequent morphological reconstructions. Regular spiking pyramidal cells have been also included in the sample. Neurons were successfully segregated into three physiological clusters: regular-, intermediate-, and fast-spiking cells using cluster analysis as a multivariate exploratory technique. When morphological types of neurons were mapped on the physiological clusters, the cluster of regular spiking cells contained all pyramidal cells, whereas the intermediate- and fast-spiking clusters consisted exclusively of interneurons. The cluster of fast-spiking cells contained all of the chandelier cells and the majority of local, medium, and wide arbor (basket) interneurons. The cluster of intermediate spiking cells predominantly consisted of cells with the morphology of neurogliaform or vertically oriented (double-bouquet) interneurons. Thus a quantitative approach enabled us to demonstrate that intrinsic electrophysiological properties of neurons in the monkey prefrontal cortex define distinct cell types, which also display distinct morphologies.

Action Potentials↗

PubMed2005

Detection of and response to signals involved in host-microbe interactions by plant-associated bacteria.

Diverse interactions between hosts and microbes are initiated by the detection of host-released chemical signals. Detection of these signals leads to altered patterns of gene expression that culminate in specific and adaptive changes in bacterial physiology that are required for these associations. This concept was first demonstrated for the members of the family Rhizobiaceae and was later found to apply to many other plant-associated bacteria as well as to microbes that colonize human and animal hosts. The family Rhizobiaceae includes various genera of rhizobia as well as species of Agrobacterium. Rhizobia are symbionts of legumes, which fix nitrogen within root nodules, while Agrobacterium tumefaciens is a pathogen that causes crown gall tumors on a wide variety of plants. The plant-released signals that are recognized by these bacteria are low-molecular-weight, diffusible molecules and are detected by the bacteria through specific receptor proteins. Similar phenomena are observed with other plant pathogens, including Pseudomonas syringae, Ralstonia solanacearum, and Erwinia spp., although here the signals and signal receptors are not as well defined. In some cases, nutritional conditions such as iron limitation or the lack of nitrogen sources seem to provide a significant cue. While much has been learned about the process of host detection over the past 20 years, our knowledge is far from being complete. The complex nature of the plant-microbe interactions makes it extremely challenging to gain a comprehensive picture of host detection in natural environments, and thus many signals and signal recognition systems remain to be described.

Chemotaxis↗

PubMed2002

Strategies for cancer prevention: the role of diet.

Linkages between diet habits and cancer risk have surfaced from a multitude of epidemiological and preclinical studies. Collectively these studies provide rather compelling evidence that dietary components modify the incidence and biological behavior of tumors. While the risk of breast, prostate, colon, lung and liver cancers are frequently associated with dietary patterns, inconsistencies are not uncommon. These inconsistencies likely reflect the multi-factorial and complex nature of cancer and the specificity that individual dietary constituents have in modifying cancer related genetic pathways. The complexity of defining the role of diet is underscored by the numerous and diverse essential and non-essential components that may alter one or more phases of the cancer process. The explosive increase in the recognition of genes and pathways for regulating cell growth and development, and evaluating the response to hormones and other chemicals synthesized by the body, offers exciting opportunities for unraveling the molecular targets by which dietary components influence cancer prevention. It is recognized that all cells have unique 'signatures' that are characterized by active and inactive genes and cellular products. It is certainly plausible that bridging knowledge about these unique cellular characteristics with the molecular targets for nutrients can be used to assist in optimizing nutrition and minimizing cancer risk.

Diet↗

PubMed2002

GABA-inactivation attenuates colinear facilitation in cat primary visual cortex.

Neurons in primary visual cortex (V1) respond preferentially to stimuli of a particular orientation falling within a circumscribed region of visual space known as their receptive field (RF). However, the response to an optimally oriented stimulus presented within the RF can be enhanced by the simultaneous presentation of co-oriented, co-linearly aligned flank stimuli falling outside the RF which, when presented alone, fail to activate the cell. This type of contextual effect, termed colinear facilitation, presumably forms the physiological substrate for the integration of the line elements of a contour and the perceptual saliency of a contour in a complex environment. Here we show that colinear facilitation in single cells of cat area V1 can be substantially reduced or abolished by focal inactivation of laterally remote cells in the same area which respond strongly to the co-oriented, colinear flank stimulus inducing the facilitatory effect. The results provide evidence that horizontal intrinsic connections between cells with co-oriented and co-linearly aligned RFs make a major contribution to colinear facilitation in V1. They imply that the neuronal circuitry underlying contour integration and saliency is already present at the earliest stage of visual cortical information processing.

Action Potentials↗

PubMed2006

A macroarray expression analysis of novel cDNAs vital for growth initiation and primary metabolism during development of Heterobasidion parviporum conidiospores.

The pathogen Heterobasidion parviporum causes significant losses to forest industries in Europe and North America. The fungus is spread by basidiospores on fresh stumps where it differentiates into a specialized infection hyphae to colonize its host. This differentiation is driven by recognition and its strategic success lies in its ability to do this rapidly and efficiently. To investigate gene expression pattern during the spore germination stages, mRNA of germinated and ungerminated conidiospores of H. parviporum harvested at distinct developmental time points (18, 36, 72 and 120 h) corresponding to periods of isotropic/germ tube emergence, polarized apical, early and late mycelial lateral branching growth stages was hybridized to macroarrays containing 338 cDNAs from H. parviporum. The results of the statistical analysis identified a total of 24, 39, 38 and 30 genes that were differentially upregulated at 18, 36, 72 and 120 h, respectively, relative to time 0. The number of the downregulated genes was 4, 6, 8 and 13 genes respectively. During isotropic, polarized and mycelial growth stages, majority of the differentially expressed genes belonged to functional categories metabolism (21-32%) and protein formation (21-30%). Real-time polymerase chain reaction (real-time-PCR) data essentially confirmed the macroarray analyses. The real-time-PCR result showed that transcript levels of genes involved in glucose metabolism (phosphoglucomutase), amino acid metabolism (arginase, delta-1-pyrroline-5-carboxylate reductase, sulfur metabolism-negative regulator, imidazoleglycerol phosphate dehydratase) and protein synthesis (40S ribosomal protein S15) were significantly increased during polarized growth (36 h) stage but decreased at early and late stages of mycelial growth (72-120 h). An understanding of the various molecular and physiological processes during the development of H. parviporum spores is an important step towards the goal of identifying novel antifungal strategies.

Gene Expression Profiling↗

PubMed1991

Classifying simple and complex cells on the basis of response modulation.

Hubel and Wiesel (1962; Journal of Physiology, London, 160, 106-154) introduced the classification of cortical neurons as simple and complex on the basis of four tests of their receptive field structure. These tests are partly subjective and no one of them unequivocally places neurons into distinct classes. A simple, objective classification criterion based on the form of the response to drifting sinusoidal gratings has been used by several laboratories, although it has been criticized by others. We review published and unpublished evidence which indicates that this simple and objective criterion reliability divides neurons of the striate cortex in both cats and monkeys into two groups that correspond closely to the classically-described simple and complex classes.

Animals↗

PubMed2002

Can the spotlight of attention be shaped like a doughnut? Evidence from steady-state visual evoked potentials.

Visual attention enables observers to extract and process high-priority information in the visualfield. Controversy remains as to whether or not observers can ignore information that falls within the spatial beam of attention. We used an objective physiological measure, the steady-state visual evoked potential (SSVEP), to investigate this question. A stream of flickering small, uppercase letters was embedded in the center of a stream of large, uppercase letters. A unitary beam would result in no difference of the SSVEP amplitude elicited by the small letter stream when it was attended versus ignored (i.e., when subjects attended the large letter stream). Contrary to this prediction, SSVEP amplitude increased by almost 100% when the small letter stream was attended compared with when it was ignored. The results support the notion that the attentional spotlight can be formed like a doughnut, processing central information differentially depending on whether it is attended or ignored.

Adult↗

PubMed2007

Border-ownership-dependent tilt aftereffect in incomplete figures.

A recent physiological finding of neural coding for border ownership (BO) that defines the direction of a figure with respect to the border has provided a possible basis for figure-ground segregation. To explore the underlying neural mechanisms of BO, we investigated stimulus configurations that activate BO circuitry through psychophysical investigation of the BO-dependent tilt aftereffect (BO-TAE). Specifically, we examined robustness of the border ownership signal by determining whether the BO-TAE is observed when gestalt factors are broken. The results showed significant BO-TAEs even when a global shape was not explicitly given due to the ambiguity of the contour, suggesting a contour-independent mechanism for BO coding.

Algorithms↗

PubMed2000

Evolution of cis-acting elements in 5' flanking regions of vertebrate actin genes.

Regulation of the vertebrate actin multigene family involves the recognition of various regulatory sequences (cis-acting elements) that specify the distinct tissue type and developmental program of expression for each actin paralogue, which implies that the distribution of cis-acting elements may be unique for each paralogue gene. To elucidate the evolution of these unique distribution patterns, we improved a method to scan for cis-acting elements in the 5' flanking regulatory region of genes and used it to analyze five cis-acting elements (SRE, MyoD binding site, Elk-1 binding site, positive and negative YY1 binding sites) of six actin paralogue genes (beta and gamma cytoplasmic actins, alpha and gamma smooth muscle actins, and alpha skeletal and alpha cardiac actins) among various vertebrates. It was shown that although an element(s) may exist in all paralogue genes of the same species, its numbers, compositions, and distribution patterns or even sequences vary remarkably among paralogues, which contributes to their different tissue- and developmental-specific expression. However, each pair of coexpressed paralogues has some certain similarity in distribution patterns. Furthermore, among various orthologues of actin genes derived from diverse vertebrates, the sequences, numbers, and distribution patterns of these cis-acting elements are highly conserved or even identical in the long run of phylogeny of vertebrates. Taken together, the results described above strongly indicate that not only the structures of actins but also their expression patterns are essential in both the phylogeny and the physiology of vertebrates. The distribution patterns of cis-acting elements of various actin genes can be regarded as indicators of both horizontal (paralogues) and vertical (orthologous) evolution of actins.

Actins↗

PubMed1989

Automatic electronystagmus analysis and documentation: recent advances in the study of vestibular, optokinetic and pursuit tracking function.

A normal or pathologically altered peripheral vestibular system and associated brainstem structures can be diagnosed from the pattern of eye movement responses elicited by appropriate stimuli. Recent advances in two stages crucial to an accurate assessment of pathological or normal responses are described in this article. The first stage involves the automatic analysis of electronystagmus signals to yield the main parameters of clinical and scientific interest, slow phase eye velocity and fast phase frequency. Since four algorithms based on the first derivative of eye position perform this task remarkably well on-line, it is not necessary to employ features of the stimulus to separate the slow and fast phases of nystagmus. Examples are used liberally to illustrate the accuracy, advantages and limitations of the algorithms. The second stage involves a numerical and graphical comparison of measurements from a patient's analyzed responses with normal responses. This documentation phase permits immediate recognition of normal, borderline, or pathological optokinetic, eye tracking, caloric and rotating chair test results. Selected examples of pathological responses illustrate the documentation technique.

Algorithms↗

PubMed2005

Matching and anatomical labeling of human airway tree.

Matching of corresponding branchpoints between two human airway trees, as well as assigning anatomical names to the segments and branchpoints of the human airway tree, are of significant interest for clinical applications and physiological studies. In the past, these tasks were often performed manually due to the lack of automated algorithms that can tolerate false branches and anatomical variability typical for in vivo trees. In this paper, we present algorithms that perform both matching of branchpoints and anatomical labeling of in vivo trees without any human intervention and within a short computing time. No hand-pruning of false branches is required. The results from the automated methods show a high degree of accuracy when validated against reference data provided by human experts. 92.9% of the verifiable branchpoint matches found by the computer agree with experts' results. For anatomical labeling, 97.1% of the automatically assigned segment labels were found to be correct.

Algorithms↗

PubMed1993

The human antiporcine cellular repertoire. In vitro studies of acquired and innate cellular responsiveness.

Discordant xenogeneic transplantation offers a potentially unlimited source of donor organs from easily bred, nonendangered, physiologically compatible animals, but has been limited by the inevitable occurrence of hyperacute rejection (HAR). The potential existence of cell-mediated discordant graft rejection has remained obscured by HAR, and hence is incompletely understood. To define the cellular elements capable of recognition of and subsequent response against discordant tissue in a clinically applicable species combination, we have studied the in vitro interaction of human peripheral blood lymphocytes against 3 porcine B lymphoblastoid cell lines and 6 primary porcine endothelial cell populations. PBL from all individuals tested (n = 10) proliferated in response to culture for 72 hr in xenogeneic mixed lymphocyte culture (XMLC) with cell lines expressing porcine MHC (SLA) class II antigens, while endothelial cultures lacking SLA class II generally failed to evoke a response. The proliferative response to class II-positive cells was attenuated by addition of anti-SLA class II antibody but not by anti-SLA class I antibody. Two endothelial populations expressing class II stimulated an inhibitable proliferative response. The magnitude of the short-term proliferative xenogeneic response was similar to that evoked by fully mismatched allogeneic human B lymphoblastoid stimulators. Additionally, extended XMLC was performed with PBL from 3 individuals. All populations responded with continued proliferation when repeatedly stimulated by porcine cells. This was characterized not only by T cell growth, but by prominent NK cell growth as well. Elucidation of the TCR V beta chain usage patterns by semiquantitative PCR documented selection of TCR transcripts from gene family V beta 2 in each group, complemented by a heterogeneous mixture of other transcripts including V beta 17.1, 20.1, and 6.1, suggesting that direct human TCR binding of porcine cells occurs, and that it is likely to be an individualistic response complemented by a more homogeneous NK response. A 51Cr release assay was utilized to demonstrate that unprimed PBL could also lyse porcine target cells. This cytotoxic response was maintained despite the complete removal of T cells, suggesting that porcine-directed NK cell activity is present prior to the maturation of any T cell response. Cytolysis was also demonstrated in serum-free medium and thus was not mediated solely by antibody-dependent cellular cytotoxicity. Chinese hamster ovary cells transfected with the human T cell receptor accessory molecule CD4 were used to study the ability of this molecule to stabilize the interaction between the human TCR and SLA class II.(ABSTRACT TRUNCATED AT 400 WORDS)

Animals↗

PubMed2007

TRPC2: molecular biology and functional importance.

TRPC (canonical transient receptor potential) channels are the closest mammalian homologs of Drosophila TRP and TRP-like channels. TRPCs are rather nonselective Ca2+ permeable cation channels and affect cell functions through their ability to mediate Ca2+ entry into cells and their action to collapse the plasma membrane potentials. In neurons the latter function leads to action potentials. The mammalian genome codes for seven TRPCs of which TRPC2 is the largest with the most restricted pattern of expression and has several alternatively spliced variants. Expressed in model cells, TRPC2 mediates both receptor- and store depletion-triggered Ca2+ entry. TRPC2 is unique among TRPCs in that its complete gene has been lost from the Old World monkey and human genomes, in which its remnants constitute a pseudogene. Physiological roles for TRPC2 have been studied in mature sperm and the vomeronasal sensory system. In sperm, TRPC2 is activated by the sperm's interaction with the oocyte's zona pellucida, leading to entry of Ca2+ and activation of the acrosome reaction. In the vomeronasal sensory organ (VNO), TRPC2 was found to constitute the transduction channel activated through signaling cascade initiated by the interaction of pheromones with V1R and V2R G protein-coupled receptors on the dendrites of the sensory neurons. V1Rs and V2Rs, the latter working in conjunction with class I MHC molecules, activate G(i)- and G(o)-type G proteins which in turn trigger activation of TRPC2, initiating an axon potential that travels to the axonal terminals. The signal is then projected to the glomeruli of the auxiliary olfactory bulb from where it is carried first to the amygdala and then to higher cortical cognition centers. Immunocytochemistry and gene deletion studies have shown that (1) the V2R-G(o)-MHCIb-beta2m pathway mediates male aggressive behavior in response to pheromones; (2) the V1R-G(i2) pathway mediates mating partner recognition, and (3) these differences have an anatomical correlate in that these functional components are located in anatomically distinct compartments of the VNO. Interestingly, these anatomically segregated signaling pathways use a common transduction channel, TRPC2.

Acrosome Reaction↗

PubMed1976

Cortical blindness after overlapping retinal-striate lesions: a limit to plasticity in the central visual system.

Lesions in cats, rats, and monkeys that spare more than 2% of the optic tract or visual cortex cause trivial deficits on most measures of vision. Overlap in the topography of the visual system may allow the spared remnant to 'see' a wider field of vision than the physiological map predicts. We tested whether monkeys left with only the lower retinal-field portion of their striate map could see with information coming from the upper half of the retina. In 6 rhesus monkeys the ganglion fibers exiting from the lower half of both retinae were cut with a photocoagulator. Later, the portion of area 17 which, according to the electrophysiological map, controls upper retinal vision, was ablated bilaterally. The combined retinal and striate lesions overlapped to include the entire visual field. Together they produced cortical blindness. The monkeys' performance of two pattern and object tasks remained at chance throughout the survival period. A previous study has described considerable sparing of vision after combined optic tract and visual cortex lesions in cats. Differences in the lesion methods and in the anatomy of the cat and monkey visual system may explain the disagreement.

Animals↗

PubMed1998

Persistent nonconvulsive status epilepticus after the control of convulsive status epilepticus.

PURPOSE: Convulsive status epilepticus (CSE) is a major medical and neurological emergency that is associated with significant morbidity and mortality. Despite this high morbidity and mortality, most acute care facilities in the United States cannot evaluate patients with EEG monitoring during or immediately after SE. The present study was initiated to determine whether control of CSE by standard treatment protocols was sufficient to terminate electrographic seizures. METHODS: One hundred sixty-four prospective patients were evaluated at the Medical College of Virginia/VCU Status Epilepticus Program. Continuous EEG monitoring was performed for a minimum of 24 h after clinical control of CSE. SE and seizure types were defined as described previously. A standardized data form entry system was compiled for each patient and used to evaluate the data collected. RESULTS: After CSE was controlled, continuous EEG monitoring demonstrated that 52% of the patients had no after-SE ictal discharges (ASIDS) and manifested EEG patterns of generalized slowing, attenuation, periodic lateralizing epileptiform discharges (PLEDS), focal slowing, and/or burst suppression. The remaining 48% demonstrated persistent electrographic seizures. More than 14% of the patients manifested nonconvulsive SE (NCSE) predominantly of the complex partial NCSE seizure (CPS) type (2). These patients were comatose and showed no overt clinical signs of convulsive activity. Clinical detection of NCSE in these patients would not have been possible with routine neurological evaluations without use of EEG monitoring. The clinical presentation, mortality, morbidity, and demographic information on this population are reported. CONCLUSIONS: Our results demonstrate that EEG monitoring after treatment of CSE is essential to recognition of persistent electrographic seizures and NCSE unresponsive to routine therapeutic management of CSE. These findings also suggest that EEG monitoring immediately after control of CSE is an important diagnostic test to guide treatment plans and to evaluate prognosis in the management of SE.

Adult↗

PubMed2003

Nonlinear estimation and modeling of fMRI data using spatio-temporal support vector regression.

This paper presents a new and general nonlinear framework for fMRI data analysis based on statistical learning methodology: support vector machines. Unlike most current methods which assume a linear model for simplicity, the estimation and analysis of fMRI signal within the proposed framework is nonlinear, which matches recent findings on the dynamics underlying neural activity and hemodynamic physiology. The approach utilizes spatio-temporal support vector regression (SVR), within which the intrinsic spatio-temporal autocorrelations in fMRI data are reflected. The novel formulation of the problem allows merging model-driven with data-driven methods, and therefore unifies these two currently separate modes of fMRI analysis. In addition, multiresolution signal analysis is achieved and developed. Other advantages of the approach are: avoidance of interpolation after motion estimation, embedded removal of low-frequency noise components, and easy incorporation of multi-run, multi-subject, and multi-task studies into the framework.

Algorithms↗

PubMed1989

The interactions between chromatic aberration, defocus and stimulus chromaticity: implications for visual physiology and colorimetry.

It has long been recognised that chromatic aberration can introduce luminance artifacts into nominally isoluminant colour stimuli. In this study the effects of chromatic aberration (along with those of defocus and stimulus spatial frequency) on the chromaticity of the retinal image are considered. Such optical effects have important methodological and functional implications for visual physiology. The "Silent Substitution" principle is a fundamental feature of modern colorimetry, being employed in both psychophysical and electrophysiological approaches to the visual system. The theoretical colour spaces introduced by MacLeod and Boynton (1979) and Derrington et al. (1984) are also ultimately based on this principle. All such applications of the silent substitution principle are sensitive to the optical effects of chromatic aberration, defocus, spatial frequency and stimulus chromaticity. The spatial acuity of the mechanisms of colour vision are appreciably lower than those of the luminance system (Mullen, 1985). In addition chromatic aberration has been shown to be a cue to ocular accommodation (Fincham, 1951). The analysis presented in this study suggests a possible explanation for these findings in terms of the ecological and computational constraints placed on the visual system by chromatic aberration.

Color Perception↗