SEARCH · PubMed Health

Results for “radial basis function network”

Explore indexed PubMed citations for clinical trials, systematic reviews and public health research. Read source abstracts and follow each citation to its original PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 127 records · Page 7Linked to original sources

PubMed2006

Kernel classifier construction using orthogonal forward selection and boosting with Fisher ratio class separability measure.

A greedy technique is proposed to construct parsimonious kernel classifiers using the orthogonal forward selection method and boosting based on Fisher ratio for class separability measure. Unlike most kernel classification methods, which restrict kernel means to the training input data and use a fixed common variance for all the kernel terms, the proposed technique can tune both the mean vector and diagonal covariance matrix of individual kernel by incrementally maximizing Fisher ratio for class separability measure. An efficient weighted optimization method is developed based on boosting to append kernels one by one in an orthogonal forward selection procedure. Experimental results obtained using this construction technique demonstrate that it offers a viable alternative to the existing state-of-the-art kernel modeling methods for constructing sparse Gaussian radial basis function network classifiers that generalize well.

Algorithms↗

PubMed2001

Stochastic radial basis functions.

Stochastic signal processing can implement gaussian activation functions for radial basis function networks, using stochastic counters. The statistics of neural inputs which control the increment and decrement operations of the counter are governed by Bernoulli distributions. The transfer functions relating the input and output pulse probabilities can closely approximate gaussian activation functions which improve with the number of states in the counter. The means and variances of these gaussian approximations can be controlled by varying the output combinational logic function of the binary counter variables.

Binomial Distribution↗

PubMed2005

The use of gas-sensor arrays to diagnose urinary tract infections.

Sensorial analysis based on the utilisation of human senses, is one of the most important and straightforward investigation methods in food and chemical analysis. An electronic nose has been used to detect in vivo Urinary Tract Infections from 45 suspected cases that were sent for analysis in a UK Health Laboratory environment. These samples were analysed by incubation in a volatile generation test tube system for 4-5 h. The volatile production patterns were then analysed using an electronic nose system with 14 conducting polymer sensors. An intelligent model consisting of an odour generation mechanism, rapid volatile delivery and recovery system, and a classifier system based on learning techniques has been considered. The implementation of an Extended Normalised Radial Basis Function network with advanced features for determining its size and parameters and the concept of fusion of multiple classifiers dedicated to specific feature parameters has been also adopted in this study. The proposed scheme achieved a very high classification rate of the testing dataset, demonstrating in this way the efficiency of the proposed scheme compared with other approaches. This study has shown the potential for early detection of microbial contaminants in urine samples using electronic nose technology.

Algorithms↗

PubMed2003

Indexed families of functionals and gaussian radial basis functions.

We report on results concerning the capabilities of gaussian radial basis function networks in the setting of inner product spaces that need not be finite dimensional. Specifically, we show that important indexed families of functionals can be uniformly approximated, with the approximation uniform also with respect to the index. Applications are described concerning the classification of signals and the synthesis of reconfigurable classifiers.

Neural Networks, Computer↗

PubMed2006

IsoSVM--distinguishing isoforms and paralogs on the protein level.

BACKGROUND: Recent progress in cDNA and EST sequencing is yielding a deluge of sequence data. Like database search results and proteome databases, this data gives rise to inferred protein sequences without ready access to the underlying genomic data. Analysis of this information (e.g. for EST clustering or phylogenetic reconstruction from proteome data) is hampered because it is not known if two protein sequences are isoforms (splice variants) or not (i.e. paralogs/orthologs). However, even without knowing the intron/exon structure, visual analysis of the pattern of similarity across the alignment of the two protein sequences is usually helpful since paralogs and orthologs feature substitutions with respect to each other, as opposed to isoforms, which do not. RESULTS: The IsoSVM tool introduces an automated approach to identifying isoforms on the protein level using a support vector machine (SVM) classifier. Based on three specific features used as input of the SVM classifier, it is possible to automatically identify isoforms with little effort and with an accuracy of more than 97%. We show that the SVM is superior to a radial basis function network and to a linear classifier. As an example application we use IsoSVM to estimate that a set of Xenopus laevis EST clusters consists of approximately 81% cases where sequences are each other's paralogs and 19% cases where sequences are each other's isoforms. The number of isoforms and paralogs in this allotetraploid species is of interest in the study of evolution. CONCLUSION: We developed an SVM classifier that can be used to distinguish isoforms from paralogs with high accuracy and without access to the genomic data. It can be used to analyze, for example, EST data and database search results. Our software is freely available on the Web, under the name IsoSVM.

Algorithms↗

PubMed2006

Protein disorder prediction by condensed PSSM considering propensity for order or disorder.

BACKGROUND: More and more disordered regions have been discovered in protein sequences, and many of them are found to be functionally significant. Previous studies reveal that disordered regions of a protein can be predicted by its primary structure, the amino acid sequence. One observation that has been widely accepted is that ordered regions usually have compositional bias toward hydrophobic amino acids, and disordered regions are toward charged amino acids. Recent studies further show that employing evolutionary information such as position specific scoring matrices (PSSMs) improves the prediction accuracy of protein disorder. As more and more machine learning techniques have been introduced to protein disorder detection, extracting more useful features with biological insights attracts more attention. RESULTS: This paper first studies the effect of a condensed position specific scoring matrix with respect to physicochemical properties (PSSMP) on the prediction accuracy, where the PSSMP is derived by merging several amino acid columns of a PSSM belonging to a certain property into a single column. Next, we decompose each conventional physicochemical property of amino acids into two disjoint groups which have a propensity for order and disorder respectively, and show by experiments that some of the new properties perform better than their parent properties in predicting protein disorder. In order to get an effective and compact feature set on this problem, we propose a hybrid feature selection method that inherits the efficiency of uni-variant analysis and the effectiveness of the stepwise feature selection that explores combinations of multiple features. The experimental results show that the selected feature set improves the performance of a classifier built with Radial Basis Function Networks (RBFN) in comparison with the feature set constructed with PSSMs or PSSMPs that adopt simply the conventional physicochemical properties. CONCLUSION: Distinguishing disordered regions from ordered regions in protein sequences facilitates the exploration of protein structures and functions. Results based on independent testing data reveal that the proposed predicting model DisPSSMP performs the best among several of the existing packages doing similar tasks, without either under-predicting or over-predicting the disordered regions. Furthermore, the selected properties are demonstrated to be useful in finding discriminating patterns for order/disorder classification.

Amino Acid Sequence↗

PubMed2004

[Feature extraction and classification of EEG for mental tasks based on wavelet packet analysis].

This paper explores the use of wavelet packet analysis to extract features from spontaneous electroencephalogram (EEG) during three different mental tasks. Artifact-free EEG segments are transformed to multi-scale representations by dyadic wavelet packet decomposition channel by channel. Their feature vectors formed by energy values of different sub-spaces EEG components are used as inputs of a radial basis function network to test the classification accuracies of three task pairs. The results indicate that the classification accuracies of the wavelet packet analysis method are significantly better than those of autoregressive model method. Wavelet packet analysis would be a promising method to extract features from EEG signals.

Electroencephalography↗

PubMed1997

Non-invasive blood glucose monitoring by means of near infrared spectroscopy: methods for improving the reliability of the calibration models.

The feasibility of using near infrared reflection spectroscopy for non-invasive blood glucose monitoring is discussed. Spectra were obtained using a diode-array spectrometer with a fiberoptic measuring head with a wavelength ranging from 800 nm to 1350 nm. Calibration was performed using partial least-squares regression and radial basis function networks. The results of different methods used to evaluate the quality of the recorded spectra in order to improve the reliability of the calibration models, are presented.

Adult↗

PubMed2006

Automated detection of videotaped neonatal seizures of epileptic origin.

PURPOSE: This study aimed at the development of a seizure-detection system by training neural networks with quantitative motion information extracted from short video segments of neonatal seizures of the myoclonic and focal clonic types and random infant movements. METHODS: The motion of the infants' body parts was quantified by temporal motion-strength signals extracted from video segments by motion-segmentation methods based on optical flow computation. The area of each frame occupied by the infants' moving body parts was segmented by clustering the motion parameters obtained by fitting an affine model to the pixel velocities. The motion of the infants' body parts also was quantified by temporal motion-trajectory signals extracted from video recordings by robust motion trackers based on block-motion models. These motion trackers were developed to adjust autonomously to illumination and contrast changes that may occur during the video-frame sequence. Video segments were represented by quantitative features obtained by analyzing motion-strength and motion-trajectory signals in both the time and frequency domains. Seizure recognition was performed by conventional feed-forward neural networks, quantum neural networks, and cosine radial basis function neural networks, which were trained to detect neonatal seizures of the myoclonic and focal clonic types and to distinguish them from random infant movements. RESULTS: The computational tools and procedures developed for automated seizure detection were evaluated on a set of 240 video segments of 54 patients exhibiting myoclonic seizures (80 segments), focal clonic seizures (80 segments), and random infant movements (80 segments). Regardless of the decision scheme used for interpreting the responses of the trained neural networks, all the neural network models exhibited sensitivity and specificity>90%. For one of the decision schemes proposed for interpreting the responses of the trained neural networks, the majority of the trained neural-network models exhibited sensitivity>90% and specificity>95%. In particular, cosine radial basis function neural networks achieved the performance targets of this phase of the project (i.e., sensitivity>95% and specificity>95%). CONCLUSIONS: The best among the motion segmentation and tracking methods developed in this study produced quantitative features that constitute a reliable basis for detecting neonatal seizures. The performance targets of this phase of the project were achieved by combining the quantitative features obtained by analyzing motion-strength signals with those produced by analyzing motion-trajectory signals. The computational procedures and tools developed in this study to perform off-line analysis of short video segments will be used in the next phase of this project, which involves the integration of these procedures and tools into a system that can process and analyze long video recordings of infants monitored for seizures in real time.

Automation↗

PubMed1994

A comparison of Radial Basis Function and backpropagation neural networks for identification of marine phytoplankton from multivariate flow cytometry data.

Two artificial neural network classifiers, the well-known Multi-layer Perception (MLP) (also known as the 'backpropagation network'), and the more recently developed Radial Basis Function (RBF) network, were evaluated and compared for their ability to identify multivariate flow cytometric data from five North Sea plankton groups (Dinoflagellidae, Bacillariophyceae, Prymnesiomonadida, Cryptomonadida, and other flagellates). RBF networks generally performed similarly to MLPs, and slightly better in cases where the data were markedly multimodal; RBF networks also have much shorter training times. The performance of MLPs was improved greatly by the use of a symmetrical bipolar 'transfer function' as opposed to the commonly-used asymmetric form. The issues of network optimisation and computational efficiency in use are discussed.

Evaluation Studies as Topic↗

PubMed2005

Automatic determination of synergies by radial basis function artificial neural networks for the control of a neural prosthesis.

This paper describes an automatic method for synthesizing the control for a neural prosthesis (NP) that could augment elbow flexion/extension and forearm pronation/supination in persons with hemiplegia. The basis for the control was a synergistic model of reaching and grasping that uses temporal and spatial synergies between the arm and body segments. The synergies were determined from the movement data measured in nondisabled persons during the performance of functional tasks. The work space was divided into six zones: distance (two attributes) and laterality (three attributes). Radial basis function artificial neural networks (RBF ANN) were used to determine synergies. Sets of RBF ANN characterized with good generalization were selected as control laws for elbow flexion/extension and forearm pronation/supination. The validation was performed for three categories: inter-subject, distance, and laterality generalization. For all of the defined spatial synergies, the correlation was high for inter-subject and distance, yet low for the laterality scenario. This suggests the necessity for implementing different maps for different directions, but the same maps for different distances. The natural movements of the upper arm then drive the lower arm (elbow flexion/extension and forearm pronation/supination) in a way that is very well suited for the administration of functional electrical therapy (FET) in persons with hemiplegia soon after the onset of impairment.

Activities of Daily Living↗

PubMed2006

An incremental training method for the probabilistic RBF network.

The probabilistic radial basis function (PRBF) network constitutes a probabilistic version of the RBF network for classification that extends the typical mixture model approach to classification by allowing the sharing of mixture components among all classes. The typical learning method of PRBF for a classification task employs the expectation-maximization (EM) algorithm and depends strongly on the initial parameter values. In this paper, we propose a technique for incremental training of the PRBF network for classification. The proposed algorithm starts with a single component and incrementally adds more components at appropriate positions in the data space. The addition of a new component is based on criteria for detecting a region in the data space that is crucial for the classification task. After the addition of all components, the algorithm splits every component of the network into subcomponents, each one corresponding to a different class. Experimental results using several well-known classification data sets indicate that the incremental method provides solutions of superior classification performance compared to the hierarchical PRBF training method. We also conducted comparative experiments with the support vector machines method and present the obtained results along with a qualitative comparison of the two approaches.

Algorithms↗

PubMed2005

Neurons with radial basis like rate functions.

Artificial neural networks constructed with "locally tuned processing units" and more generally referred to as "radial basis function networks" have been proposed by a number of workers. In this communication, I submit a conjecture, based on indirect experimental and direct computational evidence of the Hodgkin-Huxley model, that there may be biological neurons in nervous systems for which the rate function is locally tuned. If proved to be valid, this conjecture may simplify neurodynamic models of some functions of nervous systems.

Axons↗

PubMed2004

Constraining the topology of neural networks to ensure dynamics with symmetry properties.

This paper addresses the training of network models from data produced by systems with symmetry properties. It is argued that although general networks are global approximators, in practice some properties such as symmetry are very hard to learn from data. In order to guarantee that the final network will be symmetrical, constraints are developed for two types of models, namely, the multilayer perceptron (MLP) network and the radial basis function (RBF) network. In global modeling problems it becomes crucial to impose conditions for symmetry in order to stand a chance of reproducing symmetry-related phenomena. Sufficient conditions are given for MLP and RBF networks to have a set of fixed points that are symmetrical with respect to the origin of the phase space. In the case of MLP networks such conditions reduce to the absence of bias parameters and the requirement of odd activation functions. This turns out to be important from a dynamical point of view since some phenomena are only observed in the context of symmetry, which is not a structurally stable property. The results are illustrated using bench systems that display symmetry, such as the Duffing-Ueda oscillator and the Lorenz system.

Algorithms↗

PubMed2004

A novel approach for short-term load forecasting using support vector machines.

A support vector machine (SVM) modeling approach for short-term load forecasting is proposed. The SVM learning scheme is applied to the power load data, forcing the network to learn the inherent internal temporal property of power load sequence. We also study the performance when other related input variables such as temperature and humidity are considered. The performance of our proposed SVM modeling approach has been tested and compared with feed-forward neural network and cosine radial basis function neural network approaches. Numerical results show that the SVM approach yields better generalization capability and lower prediction error compared to those neural network approaches.

Artificial Intelligence↗

PubMed2006

Long-term heart rate variability as a predictor of patient age.

Patients age has been estimated in healthy population by means of the heart rate variability (HRV) parameters to assess the potentiality of HRV indexes as a biomarker of age. A long-term analysis of HRV has been performed, computing linear time and frequency domain parameters as well as non-linear metrics, in a dataset of 113 healthy subjects (age range 20-85 years old). The principal component analysis has been used to capture age-related influence on HRV and then three different models have been applied to predict subjects age: a robust linear regressor (RLR), a feedforward neural network (FFNN) and a radial basis function neural network (RBFNN). A good prediction of patient age has been obtained (using all principal components, the Pearson correlation coefficient between predicted and real age: RLR=0.793; FFNN=0.872; RBFNN=0.829), even if an overestimation in younger subjects and an underestimation in older ones may be observed. The important and complementary contribution of non-linear indexes to aging related HRV modifications has also been underlined.

Adult↗

PubMed2005

Recognition of motor imagery electroencephalography using independent component analysis and machine classifiers.

Motor imagery electroencephalography (EEG), which embodies cortical potentials during mental simulation of left or right finger lifting tasks, can be used to provide neural input signals to activate a brain computer interface (BCI). The effectiveness of such an EEG-based BCI system relies on two indispensable components: distinguishable patterns of brain signals and accurate classifiers. This work aims to extract two reliable neural features, termed contralateral and ipsilateral rebound maps, by removing artifacts from motor imagery EEG based on independent component analysis (ICA), and to employ four classifiers to investigate the efficacy of rebound maps. Results demonstrate that, with the use of ICA, recognition rates for four classifiers (fisher linear discriminant (FLD), back-propagation neural network (BP-NN), radial-basis function neural network (RBF-NN), and support vector machine (SVM)) improved significantly, from 54%, 54%, 57% and 55% to 70.5%, 75.5%, 76.5% and 77.3%, respectively. In addition, the areas under the receiver operating characteristics (ROC) curve, which assess the quality of classification over a wide range of misclassification costs, also improved from .65, .60, .62, and .64 to .74, .76, .80 and .81, respectively.

Adult↗

PubMed2006

Learning from neural control.

One of the amazing successes of biological systems is their ability to "learn by doing" and so adapt to their environment. In this paper, first, a deterministic learning mechanism is presented, by which an appropriately designed adaptive neural controller is capable of learning closed-loop system dynamics during tracking control to a periodic reference orbit. Among various neural network (NN) architectures, the localized radial basis function (RBF) network is employed. A property of persistence of excitation (PE) for RBF networks is established, and a partial PE condition of closed-loop signals, i.e., the PE condition of a regression subvector constructed out of the RBFs along a periodic state trajectory, is proven to be satisfied. Accurate NN approximation for closed-loop system dynamics is achieved in a local region along the periodic state trajectory, and a learning ability is implemented during a closed-loop feedback control process. Second, based on the deterministic learning mechanism, a neural learning control scheme is proposed which can effectively recall and reuse the learned knowledge to achieve closed-loop stability and improved control performance. The significance of this paper is that the presented deterministic learning mechanism and the neural learning control scheme provide elementary components toward the development of a biologically-plausible learning and control methodology. Simulation studies are included to demonstrate the effectiveness of the approach.

Algorithms↗