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Sediment-dissolved organic matter equilibrium partitioning of pentachlorophenol: the role of humic matter.

The dissolved humic matter (HM) has an essential influence on the release of the bound pentachlorophenol (PCP) from the solid sediment. It was studied how the increase of the dissolved HM concentration affects the equilibrium partitioning of PCP between the solid sediment matter and dissolved HM. The lake sedimentary and dissolved HM were isolated and their structural compositions were compared with elemental analyses, solid-sate 13C NMR spectroscopy and degradative analyses by pyrolysis-GC/MS. At the beginning of the equilibrium experiment, the PCP contaminant (200 microg l(-1)) was added into the water-sediment slurry system having an initial dissolved HM concentration. After 35 days, the system has reached an equilibrium and 75.5% of PCP was bound to the total solid sediment, 1.5% to dissolved HM and 23.0% remained free in water. The dissolved HM content was increased by 150% and, at the second equilibrium state after 91 days, only 63.8% of PCP was bound to the total sediment, and even 6.5% to the dissolved HM and 29.7% was free. The structural analyses indicated that the contents of aliphatics, aromatics and carboxylic carbons are lower in sediment than in dissolved HM, the content of carbohydrates in turn is higher in sediment than in dissolved HM, as well as that of different protein descriptors. The closely related partition coefficients for the sediment and dissolved HM, however, implied that the structural dissimilarity of these sorbents does not play so strong roles in the binding affinity of PCP as it would be postulated. The relatively great sorption coefficient of the minor colloid-like particle fraction in water implied its special but quantitatively quite immaterial roles in the partitioning cycle of PCP.

Adsorption↗

Effect of shelterbelt on two kinds of soils on the transformation of organic matter.

The changes of the total nitrogen, average yearly concentration of ammonia, nitrate ions, urease activity, total amount of amino acids in humic acids (HA) and the structure of humic acids were monitored in relation to the effect of shelterbelt as biogeochemical barrier located on a mineral and mineral-organic soil. The transformation of different forms of nitrogen in the soil under shelterbelt was strongly connected with the humification process and the molecular structure of humic acids.

Agriculture↗

Correlation of the partitioning of dissolved organic matter fractions with the desorption of Cd, Cu, Ni, Pb and Zn from 18 Dutch soils.

Eighteen Dutch soils were extracted in aqueous solutions at varying pH. Extracts were analyzed for Cd, Cu, Ni, Pb and Zn by ICP-AES. Extract dissolved organic carbon (DOC) was also concentrated onto a macroreticular resin and fractionation into three operationally defined fractions: hydrophilic acids (Hyd), humic acids (HA) and fulvic acids (FA). In this manner, change in absolute solution concentration and relative percentage for each fraction could be calculated as a function of extraction equilibrium pH. The soils were also analyzed for solid phase total organic carbon and total recoverable metals (EPA Method 3051). Partitioning coefficients were calculated for the metals and organic carbon (OC) based on solid phase concentrations (less the metal or OC removed by the extraction) divided by solution concentrations. Cu and Pb concentrations in solution as a function of extract equilibrium pH are greatest at low and high pH resulting in parabolic desorption/dissolution curves. While processes such as proton competition and proton promoted dissolution can account for high solution metal concentrations at low pH, these processes cannot account for higher Cu and Pb concentrations at high pH. DOC increases with increasing pH, concurrently with the increase in Cu and Pb solution concentrations. While the absolute concentrations of FA and HA generally increase with increasing pH, the relative proportional increase is greatest for HA . Variation in HA concentrations spans three orders of magnitude while FA concentrations vary an order of magnitude over the pH range examined. Correlation analysis strongly suggests that HA plays a major role in increasing the concentration of solution Cu and Pb with increasing pH in the 18 soils studied. The percentage of the OC that was due to FA was nearly constant over a wide pH range although the FA concentration increased with increasing pH and its concentration was greater than that of the HA fraction at lower pH values (pH = 3-5). Thus, in more acidic environments, FA may play a larger role than HA in governing organo-metallic interactions. For Cd, Ni, and Zn, the desorption/dissolution pattern shows high metal solution concentrations at low pH with slight increases in solution concentrations at extremely high pH values (pH>10). The results presented here suggest that the effects of dissolved organic carbon on the mobilization of Cd, Ni, and Zn may only occur in systems governed by very high pH. At high pH, it is difficult to distinguish in this study whether the slightly increased solution-phase concentrations of these cations is due to DOC or hydrolysis reactions. These high pH environments would rarely occur in natural settings.

Adsorption↗

Effect of NOM characteristics on brominated organics formation by ozonation.

In this study, organic fractions, namely, humic acid, fulvic acid, hydrophobic base and neutral, and hydrophilic acid, base, and -neutral, were extracted from source water. First, the characteristics of the organic fractions, such as carboxylic acidity, phenolic acidity, ultraviolet absorbance, and aromatic content, were analyzed. Further, a systematic study was carried out to the by-products obtained when organic fractions, to which various amounts of bromide had been added, were oxidized with ozone. Samples after ozonation were analyzed for several brominated organics. The results indicate that the characteristics of the aquatic organic matter, including carboxylic/phenolic acidity, aromatic/aliphatic content, and ultraviolet absorbance, appear to affect the formation of halogenated organics. In general, hydrophobic organics having higher phenolic acidity, aromatic content, and ultraviolet absorbance have higher ozone consumption and produce higher concentrations of brominated organics than hydrophilic organics. It was also found that humic acid demonstrated the highest bromoform (CHBr(3)), dibromoacetic acid (DBAA), and 2,4-dibromophenol (2,4-DBP) formation, whereas hydrophilic neutral produced less CHBr(3) and 2,4-DBP than the rest of the organic fractions but produced the highest amount of dibromoacetone (DBAC) and dibromoacetonitrile (DBAN).

Benzopyrans↗

Chemical species of Al reacting with soil humic acids.

The formation and presence of aluminum tridecamer (Al(13), [AlO(4)Al(12)(OH)(24)(H(2)O)(12)](7+)) in solution was strongly inhibited by soil humic acids (HA), as shown by liquid-state 27Al-nuclear magnetic resonance (NMR) analyses. It was also observed that Al(13) coprecipitated with HA in the form of Al(13)-HA complexes, as shown by solid-state magic angle spinning (MAS) 27Al-NMR analyses. Tetrahedral Al in the Al(13)-HA complexes was gradually converted to octahedral Al, indicating that Al(13) in Al(13)-HA complexes was decomposed into Al-HA complexes with reaction time. When HA was present in the acidic Al solution before the partial neutralization, the precipitates formed after the partial neutralization did not contain any tetrahedral Al, indicating the absence of Al(13) and that HA is a strong inhibitor of Al(13) formation. These results indicate that Al(13) is not formed from Al complexed with soil HA after partial neutralization. If Al(13) was added to soils, it would preferentially form precipitates of non-phytotoxic Al(13)-HA complex in the presence of excess HA (i.e. a COOH/Al(13) molar ratio of more than 9) and gradually be converted to an octahedral Al-HA complex. Therefore, Al(13) is not a major plant-growth inhibitor in humus-rich acidic soils.

Aluminum Compounds↗

Bioavailability of Cd to the common carp, Cyprinus carpio, in the presence of humic acid.

The uptake of cadmium by the common carp, Cyprinus carpio, was studied in chemically defined freshwater in the absence and presence of commercial humic acid. This was done to evaluate whether the cadmium uptake by carp in the presence of humic acid was related to the ambient Cd2+ -ion activity or whether the complexed metal also contributed to the uptake. Uptake of Cd during a 3-h period of exposure was used as a measure of the biological availability of the metal. The uptake rate data for Cd in total fish and gills obtained in the absence (control) and presence (treatment) of humic acid were analyzed using a Michaelis-Menten model for mediated transport. The Michaelis-Menten parameters KM and Vmax obtained in the control and the treatment experiment were compared for each of the two investigated carp compartments (total fish and gills). The model parameter estimates for Cd uptake by total carp in the treatment experiment (KM = 0.41 +/- 0.11 micromol l(-1); Vmax = 0.66 +/- 0.13 micromol kg(-1) h(-1)) were not significantly different from the model parameters in the control experiment (KM = 0.34+/-0.06 micromol l(-1); Vmax = 0.58+/-0.07 micromol kg(-1) h(-1)) on the basis of Welch's approximate t-test. Similarly, the Michaelis-Menten model parameter estimates for Cd uptake by carp gills in the treatment experiment (KM = 0.15 +/- 0.06 micromol l(-1); Vmax = 5.14 +/- 1.07 micromol kg(-1) h(-1)) were not significantly different from the model parameters derived from the control experiment (KM =0.27 +/- 0.09 micromol l(-1); Vmax = 7.63+/-1.38 micromol kg(-1) h(-1)). This indicated that the Cd uptake rate by total carp and in carp gills in the presence of commercial humic acid followed the measured variations in Cd2+ -ion activity as predicted by the control experiment.

Animals↗

Effect of humic acids on speciation and toxicity of copper to Paracentrotus lividus larvae in seawater.

The effects of humic acid (HA) on the toxicity of copper to sea urchin Paracentrotus lividus larvae were studied in chemically defined seawater. Square Wave Anodic Stripping Voltammetry (SWASV) was employed to study the complexation of copper in seawater medium. A simple complexation model assuming one ligand type and a 1:1 reaction stoichiometry successfully explained the inverse titration experiments. A conditional stability constant of 6.53+/-0.05 and a complexating capacity of 230+/-7 micromol Cu/g HA were obtained. Sea urchin bioassay tests with two endpoints, embryogenesis success and larval growth were carried out in order to study the toxicity of dissolved copper in both the presence and absence of HA. The toxicity data obtained fitted well into a logistic model, and the high sensitivity of both endpoints (EC(50) were 41.1 microg Cu/l and 32.9 microg Cu/l, respectively) encourages their use for biomonitoring. The HA had a clearly protective effect, reducing the toxicity of Cu to the sea urchin larvae. The labile copper, rather than the total copper concentrations, explained the toxicity of the Cu-HA solutions, and the Cu-HA complexes appeared as non-toxic forms. These results are in agreement with the Free Ion Activity Model, because the labile Cu concentrations in this buffered and chemically defined medium covary with the free ion activity of the Cu, validating the model to naturally occurring HA in the marine environment.

Animals↗

Possible disruption of pheromonal communication by humic acid in the goldfish, Carassius auratus.

Humic acids are large, complex, organic molecules which are ubiquitous components of aquatic environments as products of degradation of plant material. In aqueous solution they form microvesicles. As many teleost pheromones are steroidal in nature, we hypothesised that they would preferentially dissolve in the organic, hydrophobic core of these vesicles instead of in water and therefore be unavailable for detection. This would have obvious and profound effects on many aspects of fish biology. To test this hypothesis we recorded electro-olfactogram (EOG) response of the goldfish (Carassius auratus) olfactory epithelium to the pheromones 17 alpha,20 beta-dihydroxy-4-pregnen-3-one (1720 beta-P), its sulphated conjugate (1720 beta-P-SO(4)) and prostaglandin F(2alpha) (PGF(2alpha)), all at 10(-11) to 10(-8) M, in the absence and presence of humic acids (1-1000 m x gl(-1)). At nearly all concentrations of humic acid tested, there was a significant attenuation of the amplitude of the initial (phasic) response to 1720 beta-P compared to 1720 beta-P alone. At higher concentrations of humic acid, the EOG response to 1720 beta-P was often completely obliterated, suggesting that the concentration of the pheromone available to the olfactory epithelium was below the threshold of detection. Exposure of the olfactory epithelium to humic acid did not cause any short-term loss of sensitivity to 1720 beta-P per se. Furthermore, simultaneous recording of electro-encephalograms from the olfactory bulb demonstrated that the nervous activity evoked by the same concentration of 1720 beta-P was less intense in the presence of humic acid than its absence. PGF(2alpha) is non-steroidal and much more soluble in water. In contrast to 1720 beta-P, only the higher concentrations of humic acid (100 and 1000 mg x l(-1)) significantly diminished the EOG amplitude. 1720 beta-P-SO(4) is detected via a distinct olfactory mechanism to the free form. Given that the sulphate group increases the water solubility, we predicted that the effect of humic acid would be reduced. However, the effect of humic acid on EOG amplitude in response to 1720 beta-P-SO(4) was similar to that of the free form. We suggest that the steroid portion of the molecule adsorbs onto the surface of the humic acid microvesicles and is still effectively unavailable for olfactory detection. In conclusion, humic acid may significantly reduce the concentration of 1720 beta-P and 1720 beta-P-SO(4) available for detection by Carassius auratus in natural environments. Furthermore, as many teleost pheromones are steroid derivatives, this phenomenon may be applicable to chemical communication systems in teleosts in general.

Animals↗

Effects of temperature on the recovery of juvenile grayling (Thymallus thymallus) from exposure to Al+Fe.

One-summer-old graylings (Thymallus thymallus) were exposed for 6 days to water containing a mixture of 1 mg l(-1) Fe and 100 microg l(-1) Al at pH 5.5, with or without 15 mg l(-1) humic acid. A pH of 6.9 was used as a control. The experiment was performed at two test temperatures, 13 and 3 degrees C. After 1 week of exposure, half of the fish in the tank were taken for oxygen measurement and tissue sampling. The remaining half were maintained in metal-free water for a further week to assess their recovery at the two test temperatures. Fifty percent of the fish died under metal exposure at 13 degrees C, but none at 3 degrees C. Despite of the lack of mortalities at the lower temperature, surviving fish at both test temperatures suffered similar gill damage (adherence of lamellae), disturbances in ion regulation, increases in haematocrit value (Hct) and haemoglobin (Hb) concentration and reductions in oxygen consumption. The addition of humic acid prevented these changes. The reduced plasma chloride concentration, increased blood Hct value and Hb concentration recovered completely at 13 degrees C, whereas the lowered oxygen consumption recovered less completely, which may be attributed to the remaining minor gill damage (lamellar hypertrophy). At the lower temperature, the adherence of lamellae persisted after the recovery period, and oxygen consumption, therefore, remained at a very low level. The decreased plasma chloride concentration was also unable to recover. The accumulation of Al inside the gill tissue was greater at low temperature. We conclude that the acute toxicity of a mixture of Fe and Al to grayling and their subsequent ability to recovery is dependent on the exposure temperature.

Aluminum↗

Distribution and abundance of Gram-positive bacteria in the environment: development of a group-specific probe.

We developed a 16S rRNA-targeted oligonucleotide probe (S-P-GPos-1200-a-A-13) for the Gram-positive bacteria, confirmed its specificity by database searches and hybridization studies, and investigated the effects of humic acids on membrane hybridizations with this probe. S-P-GPos-1200-a-A-13 was used to estimate the abundance of Gram-positive populations in the bovine rumen and Lake Michigan sediments. This probe should be useful for studies of the environmental distribution of Gram-positive bacteria and the detection of uncultured, phylogenetically Gram-positive bacteria with variable or negative Gram staining reactions, and could serve for Gram staining in some diagnostic settings.

Animals↗

Evaluation of extraction and purification methods for obtaining PCR-amplifiable DNA from compost for microbial community analysis.

Analysis of microbial community structure in complex environmental samples using nucleic acid techniques requires efficient unbiased DNA extraction procedures; however, humic acids and other contaminants complicate the isolation of PCR-amplifiable DNA from compost and other organic-rich samples. In this study, combinations of DNA extraction and purification methods were compared based on DNA yield, humic acid contamination, PCR amplifiability, and microbial community structure assessed by terminal restriction fragment length polymorphisms (TRFLP) of amplified 16S rRNA genes. DNA yield and humic acid contamination, determined by A230, varied significantly between extraction methods. Humic acid contamination of DNA obtained from compost decreased with increasing salt concentration in the lysis buffer. DNA purified by gel permeation chromatography (Sepharose 4B columns) gave satisfactory PCR amplification with universal eubacterial 16S rRNA gene primers only when A260/A280 ratios exceeded 1.5. DNA purified with affinity chromatography (hydroxyapatite columns), and showing A260/A280 ratios as high as 1.8, did not show consistently satisfactory PCR amplification using the same 16S rRNA primers. Almost all DNA samples purified by agarose gel electrophoresis showed satisfactory PCR amplification. Principal components analysis (PCA) of TRFLP patterns differentiated compost types based on the presence/absence of peaks and on the height of the peaks, but differences in TRFLP patterns were not appreciable between extraction methods that yielded relatively pure DNA. High levels of humic acid contamination in extracted DNA resulted in TRFLP patterns that were not consistent and introduced a bias towards lower estimates of diversity.

Bacteria↗

A quantitative analysis of DNA extraction and purification from compost.

We quantified both DNA and humic acid concentrations during the extraction and purification of DNA from compost. The DNA extraction method consisted of bead-beating with SDS for cell lysis, poly(ethylene glycol)-8000 precipitation for preliminary DNA purification, and chromatography on a 10-ml Sephadex G-200 column for final DNA purification. Direct microscopic observation of pre- and post-lysis samples revealed that 95.3+/-2.3% of native cells was lysed. Sixty-three percent of the original DNA was lost during purification, resulting in a final DNA yield of 18.2+/-3.8 microg DNA/g of wet compost. The humic acid content was reduced by 97% during the purification steps resulting in a final humic acid concentration of 27+/-4.7 ng humic acid/microl. The purified DNA fragments were up to 14 kbp in size and were sufficiently free of contaminants to allow both restriction enzyme digestion by four different enzymes and PCR amplification of 16S rDNA.

Bacteria↗

Immunomagnetic separation of a Norwalk-like virus (genogroup I) in artificially contaminated environmental water samples.

Rabbit polyclonal antibodies were raised against a recombinant capsid protein from a genogroup I Norwalk-like virus (NLV). Magnetic beads coated with these antibodies were used in immunomagnetic separation (IMS) of the NLV. After capture of the NLV and washing of the beads, viral RNA was heat released and detected by RT-PCR. This IMS procedure was shown to have high sensitivity for detection of homologous NLV, while capture of a genogroup II NLV was less efficient. Antigen capture was not influenced by the content of humic acids in the samples. The combination of IMS and heat release was found to be more efficient than organic extraction of RNA from water contaminated with humic acids. The efficacy and simplicity of IMS/heat release render this combination a feasible tool for the preparation of NLV RNA from environmental samples, although the antigenic diversity of NLV may be a complicating factor.

Animals↗

Numerical modeling of humic colloid borne americium (III) migration in column experiments using the transport/speciation code K1D and the KICAM model.

The humic colloid borne Am(III) transport was investigated in column experiments for Gorleben groundwater/sand systems. It was found that the interaction of Am with humic colloids is kinetically controlled, which strongly influences the migration behavior of Am(III). These kinetic effects have to be taken into account for transport/speciation modeling. The kinetically controlled availability model (KICAM) was developed to describe actinide sorption and transport in laboratory batch and column experiments. Application of the KICAM requires a chemical transport/speciation code, which simultaneously models both kinetically controlled processes and equilibrium reactions. Therefore, the code K1D was developed as a flexible research code that allows the inclusion of kinetic data in addition to transport features and chemical equilibrium. This paper presents the verification of K1D and its application to model column experiments investigating unimpeded humic colloid borne Am migration. Parmeters for reactive transport simulations were determined for a Gorleben groundwater system of high humic colloid concentration (GoHy 2227). A single set of parameters was used to model a series of column experiments. Model results correspond well to experimental data for the unretarded humic borne Am breakthrough.

Americium↗

Humic acid enhanced remediation of an emplaced diesel source in groundwater. 2. Numerical model development and application.

A pilot scale experiment for humic acid-enhanced remediation of diesel fuel, described in Part 1 of this series, is numerically simulated in three dimensions. Groundwater flow, enhanced solubilization of the diesel source, and reactive transport of the dissolved contaminants and humic acid carrier are solved with a finite element Galerkin approach. The model (BIONAPL) is calibrated by comparing observed and simulated concentrations of seven diesel fuel components (BTEX and methyl-, dimethyl- and trimethylnaphthalene) over a 1500-day monitoring period. Data from supporting bench scale tests were used to estimate contaminant-carrier binding coefficients and to simulate two-site sorption of the carrier to the aquifer sand. The model accurately reproduced the humic acid-induced 10-fold increase in apparent solubility of trimethylnaphthalene. Solubility increases on the order of 2-5 were simulated for methylnaphthalene and dimethylnaphthalene, respectively. Under the experimental and simulated conditions, the residual 500-ml diesel source was almost completely dissolved and degraded within 5 years. Without humic acid flushing, the simulations show complete source dissolution would take about six times longer.

Biodegradation, Environmental↗

Humic acid enhanced remediation of an emplaced diesel source in groundwater. 1. Laboratory-based pilot scale test.

The enhanced solubility of petroleum-derived compounds in humic acid solutions is the basis for a new groundwater remediation technology. In this unique pilot-scale test, a stationary contaminant source consisting of diesel fuel was placed below the water table in a model sand aquifer (1.2 x 5.5 x 1.8-m deep) and flushed with water at a flow rate of 2 cm/h over 5 years. At 51 days, laboratory grade humic acid was added to the water and maintained at a level of approximately 0.8 g/l. The addition of humic acid had only a small impact on the aqueous transport of the BTEX components, which were rapidly dissolved from the diesel, but had a large effect on the flushing of PAHs, including methylated naphthalenes (MNs). Binding to aqueous humic acid enhanced the solubilization of MNs two- to tenfold. During aqueous transport, biodegradation of the BTEX and PAHs occurred, limiting the lateral and longitudinal extent of the diesel contaminant plume in the model aquifer. It appears that through enhanced solubilization, the overall biodegradation rate of the MNs was increased. As the various MNs were depleted from the diesel source, the MN plume shrank and then disappeared.

Biodegradation, Environmental↗

Humic colloid-borne migration of uranium in sand columns.

Column experiments were carried out to investigate the influence of humic colloids on subsurface uranium migration. The columns were packed with well-characterized aeolian quartz sand and equilibrated with groundwater rich in humic colloids (dissolved organic carbon (DOC): 30 mg dm(-3)). U migration was studied under an Ar/1% CO2 gas atmosphere as a function of the migration time, which was controlled by the flow velocity or the column length. In addition, the contact time of U with groundwater prior to introduction into a column was varied. U(VI) was found to be the dominant oxidation state in the spiked groundwater. The breakthrough curves indicate that U was transported as a humic colloid-borne species with a velocity up to 5% faster than the mean groundwater flow. The fraction of humic colloid-borne species increases with increasing prior contact time and also with decreasing migration time. The migration behavior was attributed to a kinetically controlled association/dissociation of U onto and from humic colloids and also a subsequent sorption of U onto the sediment surface. The column experiments provide an insight into humic colloid-mediated U migration in subsurface aquifers.

Adsorption↗

Contaminant transport in dual-porosity media with dissolved organic matter and bacteria present as mobile colloids.

In riverbank filtration, contaminant transport is affected by colloidal particles such as dissolved organic matter (DOM) and bacterial particles. In addition, the subsurface heterogeneity influences the behavior of contaminant transport in riverbank filtration. A mathematical model is developed to describe the contaminant transport in dual-porosity media in the presence of DOM and bacteria as mobile colloids. In the model development, a porous medium is divided into the mobile and immobile regions to consider the presence of ineffective micropores in physically heterogeneous riverbanks. We assume that the contaminant transport in the mobile region is controlled by the advection and dispersion while the contaminant transport in the immobile region occurs due to the molecular diffusion. The contaminant transfer between the mobile and immobile regions takes place by diffusive mass transfer. The mobile region is conceptualized as a four-phase system: two mobile colloidal phases, an aqueous phase, and a solid matrix. The complete set of governing equations is solved numerically with a fully implicit finite difference method. The model results show that in riverbank filtration, the contaminant can migrate further than expected due to the presence of DOM and bacteria. In addition, the contaminant mobility increases further in the presence of the immobile region in aquifers. A sensitivity analysis shows that in dual-porosity media, earlier breakthrough of the contaminant takes place as the volumetric fraction of the mobile region decreases. It is also demonstrated that as the contaminant mass transfer rate coefficient between the mobile and immobile regions increases, the contaminant concentration gradient between the two regions reverses at earlier pore volumes. The contaminant mass transfer coefficient between the mobile and immobile regions mainly controls the tailing effect of the contaminant breakthrough. The contaminant breakthrough curves are sensitive to changes in contaminant adsorption and desorption rate coefficients on DOM and bacteria. In situations where the contaminant is released in the presence of DOM and bacteria in dual-porosity media, the early breakthrough and tailing occur due to the colloidal facilitation and presence of immobile regions.

Adsorption↗