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Pollution load of Pb, Zn, and Cd and mineralogy of the recent sediments of Jordan River/Jordan.

The present geochemical analyses of Zn, Pb and Cd in eighteen subsurface sediment samples collected from two locations along the Jordan River show that Cd is anthropogenically enriched in these sediments. In the sediment column, the concentration of Zn, Pb and Cd decreases clearly with depth in the first location of the upper reach, due to the high rate of sedimentation in this location; whereas the enrichment of elements of the lower reach increases gradually towards the old sediments. The Anthropogenic factor of the studied metals lies in the sequence of Pb>Cd>Zn.

Cadmium↗

Surface complexation of ferrous iron and carbonate on ferrihydrite and the mobilization of arsenic.

Surface complexation models are commonly used to predict the mobility of trace metals in aquifers. For arsenic in groundwater, surface complexation models cannot be used because the database is incomplete. Both carbonate and ferrous iron are often present at a high concentration in groundwater and will influence the sorption of arsenic, but the surface complexation constants are absent in the database of Dzombak and Morel. This paper presents the surface complexation constants for carbonate and ferrous iron on ferrihydrite as derived for the double-layer model. For ferrous iron the constants were obtained from published data supplemented by new experiments to determine the sorption on the strong sites of ferrihydrite. For carbonate the constants were derived from experiments by Zachara et al., who employed relatively low concentrations of carbonate. The double-layer model, optimized for low concentrations, was tested against sorption experiments of carbonate on goethite at higher concentration by Villalobos and Leckie, and reasonable agreement was found. Sorption was also estimated using linear free energy relations (LFER), and results compared well with our derived constants. Model calculations confirm that sorption of particularly carbonate at common soil and groundwater concentrations reduces the sorption capacity of arsenic on ferrihydrite significantly. The displacing effect of carbonate on sorbed arsenate and arsenite has been overlooked in many studies. It may be an important cause for the high concentrations of arsenic in groundwater in Bangladesh. Sediments containing high amounts of sorbed arsenic are deposited in surface water with low carbonate concentrations. Subsequently the sediments become exposed to groundwater with a high dissolved carbonate content, and arsenic is mobilized by displacement from the sediment surface.

Arsenic↗

Mobilization of natural colloids from an iron oxide-coated sand aquifer: effect of pH and ionic strength.

Field and laboratory column experiments were performed to assess the effect of elevated pH and reduced ionic strength on the mobilization of natural colloids in a ferric oxyhydroxide-coated aquifer sediment. The field experiments were conducted as natural gradient injections of groundwater amended by sodium hydroxide additions. The laboratory experiments were conducted in columns of undisturbed, oriented sediments and disturbed, disoriented sediments. In the field, the breakthrough of released colloids coincided with the pH pulse breakthrough and lagged the bromide tracer breakthrough. The breakthrough behavior suggested that the progress of the elevated pH front controlled the transport of the mobilized colloids. In the laboratory, about twice as much colloid release occurred in the disturbed sediments as in the undisturbed sediments. The field and laboratory experiments both showed that the total mass of colloid release increased with increasing pH until the concurrent increase in ionic strength limited release. A decrease in ionic strength did not mobilize significant amounts of colloids in the field. The amount of colloids released normalized to the mass of the sediments was similar for the field and the undisturbed laboratory experiments.

Colloids↗

Episodic particle transport events controlling PAH and PCB cycling in Grand Traverse Bay, Lake Michigan.

To evaluate the influence of episodic events on particle and hydrophobic organic contaminant (HOC) cycling in the Great Lakes, we deployed sequencing sediment traps at two locations in the western arm of Grand Traverse Bay, Lake Michigan. The traps collected integrated samples of settling particles every 2 weeks from May 1997 to September 1999. The total polycyclic aromatic hydrocarbon (t-PAH) and total polychlorinated biphenyl (t-PCB) settling fluxes from the surface waters in the southern site were significantly greater than those from the northern site. In addition, there were more frequent brief increases in the mass flux to the southern site than to the northern site. These episodic events, which occurred only 20% of the time, accounted for 65% of both the mass flux and t-PAH flux. The t-PCB flux was not influenced by these episodic events, and only 18% of the t-PCB flux occurred during these events. PAHs and PCBs appear to be tracing different types of particles in the water column. Several large mass flux events characteristic of seiches were observed simultaneously in the benthic nepheloid layer (BNL) at both the northern and the southern sites. The particles settling as a result of these resuspension events had lower t-PCB and t-PAH concentrations than particles settling at other times. This suggests that the material settling into the traps on the high mass flux days is composed of a mixture of the less contaminated underlying resuspended sediment and the "regular" contaminant-rich particles settling into the BNL.

Environmental Monitoring↗

Time trends of selected persistent organic pollutants in lake sediments from Greenland.

Sediments from seven lakes in West Greenland were used as natural archives to study past and present levels of PCBs (polychlorinated biphenyls, tri- to decachlorinated), tetra-BDE #47 (2,2',4,4'-bromodiphenyl ether), chlordane (cis- and trans-octachlordane) and HxCBz (hexachlorobenzene). The concentrations found are lower than or comparable to concentrations found in sediments from other Arctic regions and one to 2 orders of magnitude lower than concentrations typically found in sediments at lower latitudes. The observed temporal trends (direct and indirect dating) show a decreasing total PCB concentration. Even though local contamination sources exist, the POP deposition in the studied area is most likely a result from long-range transport. The hypothesis about "cold condensation" suggests a latitudinal fractionation to occur between different volatile compounds during the transport toward the pole. In this study a time delay in the deposition for the low-chlorinated PCBs (tri- and tetrachlorinated), compared to their emission histories and compared to higher chlorinated PCBs, was indicated. Although very low tetra-BDE #47 concentrations are observed in this study, there are indications for an increasing concentration in recent sediment layers that may reflect increasing environmental concentrations at lower latitudes. The investigated pesticides are still in use at lower latitudes, however neither chlordane nor HxCBz show any distinct temporal trend of increasing or decreasing concentration toward the sediment surface.

Chlordan↗

Influence of aeration on hydrophobic organic contaminant distribution and diffusive flux in estuarine sediments.

Dredging operations, resuspension events during storms, and bioturbation alter the oxic state of estuarine sediments and induce changes in the composition of dissolved and particle-associated natural organic matter. These changes may alter the distribution of hydrophobic organic chemicals (HOCs) in sediments and their diffusive flux across the sediment-water interface. In this study, the impact of aerating anoxic sediments on the distribution and diffusive flux of a model HOC, 2,2',4,4'-tetrachlorobiphenyl (TeCB), was investigated. Anoxic estuarine sediments collected from three sites along a salinity gradient were used to determine site-specific apparent sorption coefficients for porewater dissolved organic carbon (Kpwdoc) and sediment organic carbon (Koc) under anoxic and oxic conditions. A two-compartment sediment flux model was employed to examine the diffusive flux of TeCB under both oxic states. Aeration of anoxic porewaters resulted in significant decreases in porewater dissolved organic matter (DOMpw) aromaticity as indicated by declines in molar absorptivity at 254 nm (p < 0.005). Aeration also resulted in a 9-13% decrease in DOMpw concentration (p < 0.005) at the two sites exhibiting lower ionic strengths; the high ionic strength site did not exhibit a significant change in DOMpw concentration (p > 0.10). The impact of aeration on TeCB distribution and diffusive flux appeared to be site-specific. Aeration of anoxic sediments induced a significant 1.4 log unit reduction in Kpwdoc at the lowest ionic strength site (p < 0.0005), while sediments from the intermediate ionic strength site exhibited a significant 0.6 log unit increase (p < 0.005). No significant change in sorption to DOMpw was observed for the high ionic strength site (p > 0.10). The sediment displaying the drop in Kpwdoc also exhibited a significant 0.4 log unit drop in Koc (p < 0.01), while the other two sites did not exhibit significant aeration-induced changes in sorption to particle-associated organic matter (p > 0.10). No significant change in diffusive flux was observed for two sites (p > 0.10), while a significant 89-110 mg m(-2) yr(-1) increase in diffusive flux was observed at the low ionic strength site (p < 0.10). This latter result represented approximately a doubling in diffusive flux. In the systems studied, facilitation of TeCB transport across the sediment-water interface by organic colloids did not appear important.

Diffusion↗

Enhanced contaminant desorption induced by phosphate mineral additions to sediment.

Apatite, Ca10(PO4)6(OH,F)2, has been successfully used as a soil amendment at numerous sites to immobilize metals and radionuclides. Such sites commonly contain multiple contaminants; the impact of apatite on these contaminants is expected to vary greatly. The objective of this study was to determine the influence of apatite on nontargeted sediment contaminants. Laboratory batch experiments were conducted under oxidized (several weekly wet/dry cycles) and reduced (water-saturated) conditions with a sediment collected from a wetland contaminated with numerous metals and radionuclides. Apatite additions resulted in the significant (p < or = 0.05) reduction of porewater Cd, Co, Hg, Pb, and U concentrations. However, apatite additions also resulted in the enhanced desorption of As, Se, and Th. Increases in porewater As and Se concentrations were the result of phosphate competitive exchange and not to the release of these contaminants directly from the apatite, which contained 29 mg kg(-1) As and 0.2 mg kg(-1) Se. Apatite additions increased porewater Th and organic C concentrations under oxidized (Eh = 497 mV) but not reduced (Eh = 65 mV) conditions. In the oxidized system, the leachate from the apatite treatment had a brown coloration and contained 226 mg L(-1) organic C, as compared to 141 mg L(-1) in the unamended samples. The desorbed organic C likely contained significant quantities of Th. This conclusion was supported by (i) the observation that porewater Th partitioned to hydrophobic resins, (ii) thermodynamic calculations which predicted that essentially all porewater Th existed as organic matter complexes, and (iii) there were significant correlations (r = 0.91, n = 8, p < or = 0.01) between porewater organic C and Th concentrations. Sediment additions of zero-valent iron particles along with the apatite eliminated the enhanced desorption of As, Se, and Th observed when only apatite was added. This study underscores the importance of monitoring the influence of sediment amendments on nontarget contaminants and provides examples of how the sediment additions of apatite can effectively immobilize some contaminants while enhancing the mobility of others.

Apatites↗

Metal speciation in anoxic sediments: when sulfides can be construed as oxides.

Metal speciation in aquatic sediments is often characterized using wet chemical sequential extraction techniques. However, these methods are operationally defined and subject to artifacts, particularly when dealing with anoxic sediments, in which metal sulfide precipitates are likely to occur. Using X-ray absorption spectroscopy (XAS) and acid-volatile sulfide (AVS) analysis, we evaluated the effectiveness of one of the most widely used sequential extraction protocols, the Tessier method, at determining Zn and Pb speciation in anoxic wetland sediments. Sequential extraction results significantly underestimated the amount of Zn associated with sulfide phases as compared to the other two approaches. XAS analysis of ZnS amended sediments indicates that the most likely source of this conflict is an early dissolution of amorphous metal sulfide phases during the sequential extraction step corresponding to the extraction of iron and manganese oxides. The reagent mixture used in this step, hydroxylamine hydrochloride-HCl, is widely used in other sequential extraction protocols, including the BCR method, limiting their application to anoxic sediments. For this reason, current sequential extraction techniques should only be used on anoxic sediments with caution, and/or in conjunction with complementary approaches to assess metal speciation.

Chemistry Techniques, Analytical↗

Strong sorption of native PAHs to pyrogenic and unburned carbonaceous geosorbents in sediments.

It has recently been shown that the presence of carbonaceous geosorbents (CG, including black carbon (BC), unburned coal, and kerogen) can cause strong sorption of polycyclic aromatic hydrocarbons (PAHs) in sediments. We studied sorption of native PAHs in four Norwegian harbor sediments of which high fractions (21-56%) of the total organic carbon (TOC) consisted of CG carbon (CGC), as shown by organic petrography. PAH sorption coefficients were 1-2 orders of magnitude above predictions based on amorphous organic carbon partitioning alone. In recent studies, such strong sorption was attributed solely to BC sorption under the implicit assumption that sorption is linear for coal and kerogen. The most important result of the present study is that total sorption is better explained by considering all three nonlinearly sorbing CGC materials than by only considering BC. In addition, it was evaluated whether activated carbon (AC) amendments could be effective in reducing the freely dissolved pore-water concentrations (CW) and thus the environmental risks of the PAHs in such strongly sorbing sediments. The results indicated that an addition of 2 weight % AC reduced the Cw by factors of 21-153 for the four sediments (average values for all PAHs). Itwas shown that phenanthrene sorption to AC was, on average, reduced by a factor of 6 in sediment-AC mixtures compared to pure AC.

Adsorption↗

A comparison of sediment and monitoring data: implications for paleomonitoring a small lake.

Long-term limnological monitoring data (from 1971 to 2001) were compared with sediment core record in Lake Viitna Linajärv (hereafter L. Viitna), a small lake in northern Estonia. The monitoring data show that L. Viitna changed from mesotrophic in the 1970s to eutrophic in the 1990s. The trends of paleodata that integrate the changes in the biogeochemical matter cycling in the lake over 2-3 years have clear signals about changes in the state of the ecosystem in L. Viitna during the last decades. A gradual increase in organic productivity should reflect a greater oxygen demand in the hypolimnion. As a result the hypolimnion became seasonally anoxic earlier and its pH level remained low for a longer time. These fundamental changes near the sediment-water interface were recorded in the sediment core. The greatest changes occurred at the beginning of the 1980s (layers at a depth of ca. 20 cm), when the meso(eu?)trophic conditions in L. Viitna started to become increasingly more eutrophic. The variations of paleorecords in the upper part of the sediment core coincide temporally with changes in the water level of the lake.

Ecosystem↗

The polycyclic aromatic hydrocarbon and geochemical biomarker composition of sediments from voes and coastal areas in the Shetland and Orkney Islands.

Marine sediments from coastal areas and voes in the Shetland and Orkney Islands were analysed for parent and branched 2- to 6-ring polycyclic aromatic hydrocarbons (PAHs) and geochemical biomarkers. Where possible 14 sediment samples were collected at random from each of 17 Shetland and 9 Orkney sites. The wide range of total PAH concentrations in sediments (i.e., < LOD up to 22619 ng g(-1) dry weight) was indicative of a variety of anthropogenic activities and different sediment types associated with the specific locations. Low PAH concentrations were determined in sandy sediments from areas of limited boat activity. The highest PAH concentrations were found in muddy sediment close to a boat repair yard. PAH concentration ratios were consistent with the main source of these compounds, in most areas, being pyrolysis. Geochemical biomarker (triterpane and sterane) profiles from the sediment were indicative, for some areas, of limited petrogenic input. Punds Voe was the only voe to show evidence of North Sea oil. PAH profiles were similar across sites within each island group, with any differences attributable to known local sources of PAHs. However, there was a clear difference in the PAH profiles of Shetland and Orkney sediments, with Orkney sediments having a higher proportion of the lighter alkylated PAHs.

Environmental Monitoring↗

The effect of humic acids on the sequential extraction of metals in soils and sediments using ICP-AES and chemometric analysis.

The effect of humic acids on the sequential extraction of metals from various soils and sediments has been studied. A new multi-element extraction method optimised via experimental design has been employed. The method uses centrifugation to pass the extractant solution, at varying pH, through the sediment sample. The sequential leaches were collected and analysed by ICP-AES. Chemometric data processing was utilised to identify the composition of the physico-chemical components in order to characterise the sample. A sediment sample collected from Carnon River (Cornwall, UK) and a reference material (NIST 2711 agricultural soil) were spiked with humic acids and the sequential extraction scheme was used to monitor the changes in metal distribution. The method has proved a quick and reliable way to evaluate different sediment samples, and has potential as a new tool for environmental geochemistry analysis.

Environmental Monitoring↗

Sediment influence on congener-specific PCB bioaccumulation by Mytilus edulis: a case study from an intertidal hot spot, Clyde Estuary, UK.

An intertidal site in the Clyde Estuary, UK, was selected to evaluate the role of sediment geochemistry on the bioaccumulation of polychlorinated biphenyls (PCBs) by mussels (Mytilus edulis). The area had previously been identified as showing anomalously high levels of PCB contamination (over 1,500 microg kg(-1) total PCB in sediment, 22 congeners). Samples of surface sediment and M. edulis were collected from two closely located sites, one within the anomalous area and another representing typical PCB contamination in the estuary. Sediment samples were separated into grain size fractions and analysed for a range of biomarker compounds, PCBs and sediment mineralogy. The anomalous site showed an atypical association of PCBs with sediment properties, despite both locations showing influence of both petrogenic and pyrogenic organic contamination. Interrogation of data using correlation and principal component analysis showed that sediment mineralogy as well as organic matter composition influenced PCB congener distribution. One sediment source was found to control the PCB concentration in mussels at both locations and clay mineralogy appears to control PCB uptake by biota with preference for higher molecular weight congeners. Overall bioavailability is determined by sediment TOC.

Animals↗

Growth of plants on TBT-contaminated harbour sludge and effect on TBT removal.

BACKGROUND: Worldwide, large amounts of sediments have to be dredged annually from waterways and harbours. These sediments are sometimes polluted with a variety of toxic compounds. In some countries, including Belgium, the load with the biocide tributyltin (TBT) from ship coatings prohibits the dumping of harbour sludge into the sea. Land-based dumping is a commonly used alternative. OBJECTIVE: This research investigated the feasibility to use land-deposited harbour sludge for plant production. In a field trial, the growth of 38 more or less salt-tolerant plant species on low and high TBT-contaminated sediments was studied. The elimination of TBT from sludge with and without vegetation was compared. The uptake of TBT and its degradation products di- and monobutyltin (DBT and MBT) into harvest products under field conditions was determined. EXPERIMENTAL SET-UP: Sediments dredged in May 2003 from the brackish waters of the port of Antwerp were analysed in the laboratory for soil texture, pH, electroconductivity, sodium, magnesium, potassium, calcium, ammonium, nitrate, total nitrogen, chloride, sulphur and the organotins TBT, DBT and MBT. The sediments were lagooned for one year to dewater, desalinate and improve their structure. Salt-tolerant domestic and wild plants were selected and sown in May 2004. In August 2004, plants were harvested and the produced biomass was determined. Samples were taken from vegetated and non-vegetated top and bottom sediments and from plants growing above soil and analysed for TBT, DBT and MBT. RESULTS: The fresh sediments showed a good supply with nutrients and a neutral pH, but were rather saline (EC 14 mS cm(-1) of the saturated paste extract). The salinity decreased to 3.7 mS cm(-1) during lagoonation. The high and the low contaminated sediment had initially 43 and 1.6 mg TBT kg(-1) dry weight, respectively. Besides TBT, several other contaminants were present in the sediments at critical levels. The biomass production of the plant species from the field trial ranged from 0.2 to 13 tons dry mass per hectare. Plants performing excellently were barley, sorghum, rape seed, a clover/grass mix and reed. If at all, a positive influence of TBT on plant growth was seen. TBT was degraded significantly faster (>40%) below barley. The uptake of TBT, DBT and MBT into stem and leaves of reed, grass and clover was very low, but measurable and not related to concentrations in soil. No uptake of TBT or its metabolites into corn of barley was found. DISCUSSION: This study confirmed former results: the toxicity of TBT to higher plants is low, and even high levels in soils would not be a hindrance for crop production. The removal of TBT seemed to be increased by both lagooning and plant growth, although the target values for sea dumping in use in certain European countries were not reached. A plausible explanation for the faster degradation of TBT under vegetation is that oxygen is a limiting factor, and plants dewater the soil, thus aerating it. The uptake of the organotins TBT, DBT and MBT into harvest products is probably due to attached soil particles. CONCLUSIONS: To summarize, barley was the optimal species: it grew very well despite the salinity of the dredged sediments, it had a significantly positive effect on TBT removal; it showed no measurable uptake of TBT or the other butyltins into the harvested product; and it is a cash crop well established in European agriculture. OUTLOOK: The amounts of dredged sediments are high, and good soils are becoming increasingly rare. The feasibility of using dredged sediments for non-food production, such as energy crops, should be investigated by a critical risk assessment.

Belgium↗

Combined effects of contaminant desorption and toxicity on risk from PAH contaminated sediments.

A strong inverse correlation was observed between the polycyclic aromatic hydrocarbon (PAH) mass fraction desorbed, a surrogate measure of bioavailability, and relative carcinogenicity, as quantified by potency equivalency factors (PEFs), for two study sediments from the New York/New Jersey Harbor estuary. Because compounds with the highest toxicity, such as dibenz(a,h)anthracene and benzo(a)pyrene (BAP), also tended to be the least rapidly and least extensively desorbed, the U.S. Environmental Protection Agency (EPA) default guidance may dramatically overestimate risk from exposure to PAH-contaminated soils or sediments. A "relative risk index" (RRI) was developed to account for the combined effects of compound-specific bioavailability and toxic potency in estimating excess cancer risk. Using this approach, estimated excess cancer risk may be diminished by as much as a factor of 159 times versus default EPA guidance. Also, the hierarchy of estimated risk between study sediments and among treatment fractions of study sediments differed using the two approaches, implying that the default approach may inaccurately determine site clean-up priorities. The percentage contribution of each potentially carcinogenic priority PAH to total excess cancer risk was computed under various scenarios. In each case, the contribution of BAP to total excess cancer risk was remarkably invariable, for example, ranging from 48% to 52% in one sediment, and 44% to 54% in the other, over four different exposure durations. These results suggest that BAP may be an excellent indexing compound for gauging relative exposure risk across sediments. Other important contributors to total excess cancer risk were benz(a)anthracene and dibenz(a,h)anthracene. Together, these three compounds comprised nearly 90% of total excess cancer risk from all PAHs in every scenario. This integrated RRI approach may enable regulators to more accurately gauge relative risks and make more informed sediment management decisions.

Benzo(a)pyrene↗

Distribution and diversity of tetracycline resistance genes encoding ribosomal protection proteins in Mekong river sediments in Vietnam.

We investigated the distribution and diversity of tetracycline resistance genes encoding ribosomal protection proteins (RPPs) in river and channel sediments of the Mekong Delta in Vietnam. The sediment samples were taken from nine sites in the Hau River in southern Vietnam and from 1 site in a channel in Can Tho City in May 2004 using an Ekman-Birge sediment surface sampler. The RPP genes were amplified using PCR with DNA templates obtained directly from the sediments. The tet(M), tet(S), and tet(W) genes were detected by PCR in most sediment samples. Denaturing gradient gel electrophoresis analysis of these genes and sequencing of the resulting bands showed that tet(S) and tet(W) had only one genotype each, but that tet(M) had at least two, which were tentatively called type 1 and type 2. Type 1 tet(M) was identical to the gene encoded in various plasmids and transposons of gram-positive and gram-negative bacteria, and type 2tet(M) was similar to the gene encoded in Tn1545 of Enterococcus faecalis (99% identity, 170 bp/171 bp). This study showed that various RPP genes were widely distributed in the river and channel sediments of the Mekong Delta.

Amino Acid Sequence↗

Comparison of instream methods for measuring hydraulic conductivity in sandy streambeds.

Streambed hydraulic conductivity (K) values were determined at seven stream transects in the Platte River Basin in Nebraska using different instream measurement techniques. Values were compared to determine the most appropriate technique(s) for use in sandy streambeds. Values of K determined from field falling- and constant-head permeameter tests analyzed using the Darcy equation decreased as permeameter diameter increased. Seepage meters coupled with hydraulic gradient measurements failed to yield K values in 40% of the trials. Consequently, Darcy permeameter and seepage meter tests were not preferred approaches. In the upper 0.25 m of the streambed, field falling- and constant-head permeameter tests analyzed with the Hvorslev solution generally had similar K values that were significantly greater than those determined using the Hazen grain-size, Bouwer and Rice slug test for anisotropic and isotropic conditions, and Alyamani and Sen grain-size methods; median differences between these tests and the Hvorslev falling-head 60 cm diameter permeameter were about 8, 9, 17, and 35 m/day, respectively. The Hvorslev falling-head permeameter test is considered the most robust method for measuring K of the upper 0.25 m of the streambed because of the inherent limitations of the empirical grain-size methods and less sediment disturbance for permeameter than slug tests. However, lateral variability in K along transects on the Platte, North Platte, and Wood Rivers was greater than variability in K between valid permeameter, grain-size, or slug tests, indicating that the method used may matter less than making enough measurements to characterize spatial variability adequately. At the Platte River tributary sites, the upper 0.3 m of the streambed typically had greater K than sediment located 0.3 to 2.5 m below the streambed surface, indicating that deposits below the streambed may limit ground water/surface water fluxes. The Hvorslev permeameter tests are not a practical measurement approach for these greater depths. Thus, selection of a method for measuring streambed K needs to consider the vertical location of the sediments that are most likely to limit the rate of ground water/surface water interaction.

Environmental Monitoring↗

Determination of virus abundance in marine sediments.

In this study, we optimized procedures to enumerate viruses from marine sediments by epifluorescence microscopy using SYBR Green I as a stain. The highest virus yields from the bulk of the sediments were obtained by utilizing pyrophosphate and 3 min of sonication. The efficiency of extraction benthic viruses by pyrophosphate-ultrasound treatment was about 60% of the extractable virus particles. Samples treated with nucleases had increased virus counts, suggesting a masking effect of extracellular DNA. No significant differences were observed between virus counts obtained by epifluorescence microscopy and transmission electron microscopy. Both formaldehyde and glutaraldehyde gave significant reductions of virus counts after only 24 h of sediment storage, but no further loss occurred after 7 days.

Benzothiazoles↗